Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Gm43161-201ENSMUST00000197020 1688 ntBASIC10□□□□□ -0.81
Scaf8Q6DID3 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC10□□□□□ -0.81
Scaf8Q6DID3 Fam161b-202ENSMUST00000065536 3000 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Scaf8Q6DID3 Ppil4-201ENSMUST00000015901 3471 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Scaf8Q6DID3 Adra2b-201ENSMUST00000071902 3936 ntAPPRIS P2 BASIC10□□□□□ -0.81
Scaf8Q6DID3 Ttc28-206ENSMUST00000156290 10688 ntAPPRIS P2 TSL 5 BASIC10□□□□□ -0.81
Scaf8Q6DID3 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC10□□□□□ -0.81
Scaf8Q6DID3 Als2-201ENSMUST00000027178 6342 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Scaf8Q6DID3 Parpbp-201ENSMUST00000048518 3594 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Scaf8Q6DID3 Dcx-202ENSMUST00000087313 3120 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
Scaf8Q6DID3 Ifna14-201ENSMUST00000102808 570 ntAPPRIS P1 BASIC10□□□□□ -0.81
Scaf8Q6DID3 Gm26344-201ENSMUST00000104553 132 ntBASIC10□□□□□ -0.81
Scaf8Q6DID3 Gm16463-201ENSMUST00000120527 721 ntBASIC10□□□□□ -0.81
Scaf8Q6DID3 Gm13484-201ENSMUST00000120738 412 ntBASIC10□□□□□ -0.81
Scaf8Q6DID3 Gm15843-201ENSMUST00000146593 529 ntBASIC10□□□□□ -0.81
Scaf8Q6DID3 Gm12860-201ENSMUST00000148457 957 ntTSL 1 (best) BASIC10□□□□□ -0.81
Scaf8Q6DID3 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC10□□□□□ -0.81
Scaf8Q6DID3 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC10□□□□□ -0.81
Scaf8Q6DID3 Obox4-ps38-201ENSMUST00000175961 724 ntBASIC10□□□□□ -0.81
Scaf8Q6DID3 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC10□□□□□ -0.81
Scaf8Q6DID3 Slc35a5-205ENSMUST00000181177 865 ntTSL 3 BASIC10□□□□□ -0.81
Scaf8Q6DID3 Gm6410-201ENSMUST00000181337 1105 ntTSL 1 (best) BASIC10□□□□□ -0.81
Scaf8Q6DID3 Mir6921-201ENSMUST00000183719 80 ntBASIC10□□□□□ -0.81
Scaf8Q6DID3 Gm28859-201ENSMUST00000186650 616 ntBASIC10□□□□□ -0.81
Scaf8Q6DID3 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC10□□□□□ -0.81
Scaf8Q6DID3 Gm28655-201ENSMUST00000191538 692 ntBASIC10□□□□□ -0.81
Scaf8Q6DID3 Gm37770-201ENSMUST00000192855 772 ntBASIC10□□□□□ -0.81
Scaf8Q6DID3 Gm6558-203ENSMUST00000195395 612 ntTSL 5 BASIC10□□□□□ -0.81
Scaf8Q6DID3 Gm20074-201ENSMUST00000208144 484 ntBASIC10□□□□□ -0.81
Scaf8Q6DID3 Gm45269-201ENSMUST00000210359 282 ntBASIC10□□□□□ -0.81
Scaf8Q6DID3 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC10□□□□□ -0.81
Scaf8Q6DID3 Gm6362-201ENSMUST00000217686 836 ntBASIC10□□□□□ -0.81
Scaf8Q6DID3 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC10□□□□□ -0.81
Scaf8Q6DID3 AC157017.1-201ENSMUST00000220148 364 ntBASIC10□□□□□ -0.81
Scaf8Q6DID3 CT010480.5-201ENSMUST00000225026 217 ntBASIC10□□□□□ -0.81
Scaf8Q6DID3 AC154329.2-201ENSMUST00000225257 383 ntBASIC10□□□□□ -0.81
Scaf8Q6DID3 AC161252.1-201ENSMUST00000225536 467 ntBASIC10□□□□□ -0.81
Scaf8Q6DID3 Gm14267-208ENSMUST00000228324 1189 ntBASIC10□□□□□ -0.81
Scaf8Q6DID3 H2-M11-201ENSMUST00000041964 1006 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Scaf8Q6DID3 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC10□□□□□ -0.81
Scaf8Q6DID3 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC10□□□□□ -0.81
Scaf8Q6DID3 Dmrtc1c2-202ENSMUST00000087899 717 ntAPPRIS P3 TSL 5 BASIC10□□□□□ -0.81
Scaf8Q6DID3 9030619P08Rik-201ENSMUST00000096397 857 ntTSL 1 (best) BASIC10□□□□□ -0.81
Scaf8Q6DID3 A630012P03Rik-202ENSMUST00000114854 1974 ntTSL 5 BASIC10□□□□□ -0.81
Scaf8Q6DID3 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Scaf8Q6DID3 Olfr1189-202ENSMUST00000213679 1983 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Scaf8Q6DID3 Zfhx3-201ENSMUST00000043896 16433 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Scaf8Q6DID3 Ctnna3-203ENSMUST00000105441 2907 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Scaf8Q6DID3 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Scaf8Q6DID3 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC10□□□□□ -0.81
Scaf8Q6DID3 4930433I11Rik-202ENSMUST00000206529 2963 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Scaf8Q6DID3 Nolc1-209ENSMUST00000225780 2978 ntAPPRIS ALT2 BASIC10□□□□□ -0.81
Scaf8Q6DID3 Cdc5l-201ENSMUST00000024727 2989 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Scaf8Q6DID3 Cilp-201ENSMUST00000048762 4153 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Scaf8Q6DID3 Dnm2-203ENSMUST00000115404 3455 ntAPPRIS ALT1 TSL 5 BASIC10□□□□□ -0.81
Scaf8Q6DID3 Ctnnd1-209ENSMUST00000111678 5870 ntTSL 5 BASIC10□□□□□ -0.81
Scaf8Q6DID3 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Scaf8Q6DID3 Gm26874-201ENSMUST00000181959 1817 ntTSL 5 BASIC10□□□□□ -0.81
Scaf8Q6DID3 Tktl2-202ENSMUST00000183187 5485 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Scaf8Q6DID3 Gm43845-201ENSMUST00000202462 1820 ntBASIC10□□□□□ -0.81
Scaf8Q6DID3 Hadha-205ENSMUST00000156859 4017 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Scaf8Q6DID3 Gm36949-201ENSMUST00000192487 2327 ntBASIC10□□□□□ -0.81
Scaf8Q6DID3 Tcp10b-201ENSMUST00000086787 2327 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Scaf8Q6DID3 Rorc-202ENSMUST00000197040 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Scaf8Q6DID3 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC10□□□□□ -0.81
Scaf8Q6DID3 Gm15789-201ENSMUST00000118992 1359 ntBASIC10□□□□□ -0.81
Scaf8Q6DID3 4930435N07Rik-201ENSMUST00000208065 2127 ntBASIC10□□□□□ -0.81
Scaf8Q6DID3 Drc3-204ENSMUST00000108723 1917 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Scaf8Q6DID3 Ctso-201ENSMUST00000029649 3468 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Scaf8Q6DID3 Tns1-217ENSMUST00000191104 9904 ntAPPRIS P3 TSL 5 BASIC9.99□□□□□ -0.81
Scaf8Q6DID3 Gm14565-201ENSMUST00000140021 2494 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Scaf8Q6DID3 1700001J11Rik-202ENSMUST00000190330 2463 ntBASIC9.99□□□□□ -0.81
Scaf8Q6DID3 Pign-210ENSMUST00000190811 3015 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Scaf8Q6DID3 Amotl1-206ENSMUST00000223132 3046 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Scaf8Q6DID3 Lrit2-201ENSMUST00000057176 2790 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Scaf8Q6DID3 Prdm1-204ENSMUST00000218369 2517 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Scaf8Q6DID3 AL662807.2-201ENSMUST00000224024 3335 ntBASIC9.99□□□□□ -0.81
Scaf8Q6DID3 Ttc28-201ENSMUST00000040111 10780 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Scaf8Q6DID3 Rhbdd1-201ENSMUST00000027322 3636 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Scaf8Q6DID3 Vmn1r199-204ENSMUST00000227846 5523 ntAPPRIS ALT2 BASIC9.99□□□□□ -0.81
Scaf8Q6DID3 Nfam1-202ENSMUST00000100377 2881 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Scaf8Q6DID3 Spire1-207ENSMUST00000224799 2059 ntBASIC9.99□□□□□ -0.81
Scaf8Q6DID3 Mlh3-202ENSMUST00000166821 5420 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Scaf8Q6DID3 Lrrc55-202ENSMUST00000111601 2900 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Scaf8Q6DID3 Gpm6b-208ENSMUST00000112233 2949 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Scaf8Q6DID3 Gm19656-201ENSMUST00000208543 4610 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Scaf8Q6DID3 Tec-201ENSMUST00000071944 2659 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Scaf8Q6DID3 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Scaf8Q6DID3 Trav12-1-201ENSMUST00000103650 344 ntAPPRIS ALT2 BASIC9.99□□□□□ -0.81
Scaf8Q6DID3 Anapc15-205ENSMUST00000106978 841 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Scaf8Q6DID3 Gm6490-201ENSMUST00000111862 461 ntBASIC9.99□□□□□ -0.81
Scaf8Q6DID3 Gm7785-201ENSMUST00000117121 892 ntBASIC9.99□□□□□ -0.81
Scaf8Q6DID3 Gm15572-201ENSMUST00000119248 593 ntBASIC9.99□□□□□ -0.81
Scaf8Q6DID3 Gm15842-201ENSMUST00000120513 618 ntBASIC9.99□□□□□ -0.81
Scaf8Q6DID3 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC9.99□□□□□ -0.81
Scaf8Q6DID3 Gm17359-201ENSMUST00000164216 778 ntAPPRIS P2 TSL 5 BASIC9.99□□□□□ -0.81
Scaf8Q6DID3 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC9.99□□□□□ -0.81
Scaf8Q6DID3 Gm20432-201ENSMUST00000173716 250 ntBASIC9.99□□□□□ -0.81
Scaf8Q6DID3 Vmn2r-ps74-201ENSMUST00000174705 917 ntBASIC9.99□□□□□ -0.81
Scaf8Q6DID3 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC9.99□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 145.3 ms