Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Msh6P54276 Cox7c-204ENSMUST00000132233 709 ntTSL 2 BASIC9.59□□□□□ -0.87
Msh6P54276 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Msh6P54276 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC9.59□□□□□ -0.87
Msh6P54276 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC9.59□□□□□ -0.87
Msh6P54276 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Msh6P54276 Gm24824-201ENSMUST00000175097 78 ntBASIC9.59□□□□□ -0.87
Msh6P54276 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
Msh6P54276 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC9.59□□□□□ -0.87
Msh6P54276 Gm27178-201ENSMUST00000184962 340 ntBASIC9.59□□□□□ -0.87
Msh6P54276 Mir8120-201ENSMUST00000185035 139 ntBASIC9.59□□□□□ -0.87
Msh6P54276 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC9.59□□□□□ -0.87
Msh6P54276 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC9.59□□□□□ -0.87
Msh6P54276 Gm37679-201ENSMUST00000192868 1192 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Msh6P54276 Gm43147-201ENSMUST00000196944 542 ntBASIC9.59□□□□□ -0.87
Msh6P54276 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC9.59□□□□□ -0.87
Msh6P54276 Gm44287-201ENSMUST00000203069 290 ntTSL 3 BASIC9.59□□□□□ -0.87
Msh6P54276 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Msh6P54276 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC9.59□□□□□ -0.87
Msh6P54276 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
Msh6P54276 Myl12a-201ENSMUST00000024846 980 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
Msh6P54276 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Msh6P54276 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC9.59□□□□□ -0.87
Msh6P54276 Gm42514-201ENSMUST00000196636 1832 ntBASIC9.59□□□□□ -0.87
Msh6P54276 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
Msh6P54276 Slc3a1-201ENSMUST00000024944 2307 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
Msh6P54276 Il1rl1-202ENSMUST00000097772 5302 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Msh6P54276 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Msh6P54276 Gm16487-201ENSMUST00000105048 4037 ntBASIC9.58□□□□□ -0.88
Msh6P54276 Dusp3-202ENSMUST00000107172 4445 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
Msh6P54276 Gm42692-201ENSMUST00000199482 2833 ntBASIC9.58□□□□□ -0.88
Msh6P54276 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Msh6P54276 Rps6ka6-201ENSMUST00000065976 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Msh6P54276 Eif4g2-213ENSMUST00000162415 7995 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Msh6P54276 Adgrb3-207ENSMUST00000151309 5448 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Msh6P54276 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Msh6P54276 Qrich2-204ENSMUST00000208602 7260 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Msh6P54276 Copg1-202ENSMUST00000113607 4140 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Msh6P54276 AC156025.3-201ENSMUST00000225919 3095 ntBASIC9.58□□□□□ -0.88
Msh6P54276 AC105958.1-201ENSMUST00000214783 2144 ntBASIC9.58□□□□□ -0.88
Msh6P54276 Hcfc1-201ENSMUST00000033761 8138 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Msh6P54276 Gm5903-201ENSMUST00000121836 2325 ntBASIC9.58□□□□□ -0.88
Msh6P54276 Vmn2r55-202ENSMUST00000172743 2346 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Msh6P54276 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Msh6P54276 Pbdc1-201ENSMUST00000033577 2638 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Msh6P54276 Olfr1261-203ENSMUST00000213909 2912 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Msh6P54276 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Msh6P54276 Gm26419-201ENSMUST00000104272 133 ntBASIC9.58□□□□□ -0.88
Msh6P54276 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
Msh6P54276 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC9.58□□□□□ -0.88
Msh6P54276 Gm11903-201ENSMUST00000118958 727 ntBASIC9.58□□□□□ -0.88
Msh6P54276 Gm12959-201ENSMUST00000119396 403 ntBASIC9.58□□□□□ -0.88
Msh6P54276 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC9.58□□□□□ -0.88
Msh6P54276 Gm2735-201ENSMUST00000136133 277 ntBASIC9.58□□□□□ -0.88
Msh6P54276 Mir1983-201ENSMUST00000157523 132 ntBASIC9.58□□□□□ -0.88
Msh6P54276 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Msh6P54276 Gm9114-201ENSMUST00000188558 997 ntBASIC9.58□□□□□ -0.88
Msh6P54276 Gm7369-201ENSMUST00000192738 936 ntBASIC9.58□□□□□ -0.88
Msh6P54276 Gm44356-201ENSMUST00000196731 111 ntBASIC9.58□□□□□ -0.88
Msh6P54276 Gm44192-201ENSMUST00000204195 556 ntBASIC9.58□□□□□ -0.88
Msh6P54276 AC121793.1-201ENSMUST00000214211 633 ntTSL 5 BASIC9.58□□□□□ -0.88
Msh6P54276 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC9.58□□□□□ -0.88
Msh6P54276 Gm19238-201ENSMUST00000221936 1260 ntBASIC9.58□□□□□ -0.88
Msh6P54276 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Msh6P54276 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Msh6P54276 Olfr1189-202ENSMUST00000213679 1983 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Msh6P54276 Gm38302-201ENSMUST00000191676 2076 ntBASIC9.58□□□□□ -0.88
Msh6P54276 Olfr225-202ENSMUST00000213169 2658 ntAPPRIS P5 TSL 5 BASIC9.58□□□□□ -0.88
Msh6P54276 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC9.58□□□□□ -0.88
Msh6P54276 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Msh6P54276 Lhx4-201ENSMUST00000027740 5514 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Msh6P54276 Thrb-201ENSMUST00000022303 4532 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Msh6P54276 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Msh6P54276 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
Msh6P54276 Zfp445-206ENSMUST00000216063 6189 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Msh6P54276 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC9.57□□□□□ -0.88
Msh6P54276 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC9.57□□□□□ -0.88
Msh6P54276 Gm17552-201ENSMUST00000181211 3877 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Msh6P54276 Mical2-201ENSMUST00000037991 3352 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Msh6P54276 Gm45861-201ENSMUST00000209669 7184 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Msh6P54276 Epha7-202ENSMUST00000080934 2880 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Msh6P54276 Tank-202ENSMUST00000112494 2698 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Msh6P54276 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Msh6P54276 Gm42973-201ENSMUST00000197913 3200 ntBASIC9.57□□□□□ -0.88
Msh6P54276 Cpsf2-201ENSMUST00000047357 5732 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Msh6P54276 Cyld-201ENSMUST00000043526 8022 ntAPPRIS ALT1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Msh6P54276 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC9.57□□□□□ -0.88
Msh6P54276 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC9.57□□□□□ -0.88
Msh6P54276 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Msh6P54276 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Msh6P54276 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Msh6P54276 Gm43189-201ENSMUST00000196040 3069 ntBASIC9.57□□□□□ -0.88
Msh6P54276 Itpr1-201ENSMUST00000032192 9870 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Msh6P54276 Gm13260-201ENSMUST00000117797 1264 ntBASIC9.57□□□□□ -0.88
Msh6P54276 Gm8312-201ENSMUST00000119380 618 ntBASIC9.57□□□□□ -0.88
Msh6P54276 Gm15538-201ENSMUST00000121410 313 ntBASIC9.57□□□□□ -0.88
Msh6P54276 Gm16276-201ENSMUST00000131218 262 ntBASIC9.57□□□□□ -0.88
Msh6P54276 Gm24680-201ENSMUST00000158759 126 ntBASIC9.57□□□□□ -0.88
Msh6P54276 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC9.57□□□□□ -0.88
Msh6P54276 Gm5445-201ENSMUST00000180224 480 ntBASIC9.57□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms