Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Col18a1P39061 AC166574.7-201ENSMUST00000228502 704 ntBASIC9.86□□□□□ -0.83
Col18a1P39061 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Col18a1P39061 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Col18a1P39061 Sez6-201ENSMUST00000000646 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col18a1P39061 Hpgds-201ENSMUST00000031982 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col18a1P39061 Olfr56-206ENSMUST00000203810 1990 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Col18a1P39061 AC154612.1-202ENSMUST00000224806 1725 ntBASIC9.85□□□□□ -0.83
Col18a1P39061 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC9.85□□□□□ -0.83
Col18a1P39061 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Col18a1P39061 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Col18a1P39061 Eya3-202ENSMUST00000079157 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col18a1P39061 Pcdhb7-201ENSMUST00000053037 3501 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Col18a1P39061 Mcm10-202ENSMUST00000102985 4867 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col18a1P39061 Lamb1-201ENSMUST00000002979 5784 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Col18a1P39061 Gpr152-201ENSMUST00000096338 3922 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col18a1P39061 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC9.85□□□□□ -0.83
Col18a1P39061 Gm45828-201ENSMUST00000206938 1836 ntBASIC9.85□□□□□ -0.83
Col18a1P39061 Gm43621-201ENSMUST00000202733 2022 ntBASIC9.85□□□□□ -0.83
Col18a1P39061 Epn2-204ENSMUST00000108713 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col18a1P39061 Pla2g16-201ENSMUST00000025925 3523 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col18a1P39061 Sec22c-201ENSMUST00000078547 5713 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col18a1P39061 Ints2-201ENSMUST00000018212 5906 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col18a1P39061 Zfx-203ENSMUST00000113926 6762 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col18a1P39061 Plekha6-201ENSMUST00000038295 7388 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Col18a1P39061 Sorbs1-212ENSMUST00000225148 2379 ntAPPRIS ALT2 BASIC9.85□□□□□ -0.83
Col18a1P39061 Pakap-203ENSMUST00000150412 5163 ntAPPRIS P5 TSL 5 BASIC9.85□□□□□ -0.83
Col18a1P39061 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC9.85□□□□□ -0.83
Col18a1P39061 Gm15765-201ENSMUST00000118407 910 ntBASIC9.85□□□□□ -0.83
Col18a1P39061 Gm15181-201ENSMUST00000120142 177 ntBASIC9.85□□□□□ -0.83
Col18a1P39061 Gm11585-201ENSMUST00000120901 569 ntBASIC9.85□□□□□ -0.83
Col18a1P39061 Gm13940-201ENSMUST00000121023 301 ntBASIC9.85□□□□□ -0.83
Col18a1P39061 Gm12833-201ENSMUST00000136112 477 ntBASIC9.85□□□□□ -0.83
Col18a1P39061 Gm2709-201ENSMUST00000142979 350 ntBASIC9.85□□□□□ -0.83
Col18a1P39061 Gm26323-201ENSMUST00000157743 175 ntBASIC9.85□□□□□ -0.83
Col18a1P39061 Svs3a-201ENSMUST00000017147 1191 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col18a1P39061 Gm20454-201ENSMUST00000172713 221 ntBASIC9.85□□□□□ -0.83
Col18a1P39061 Gm26455-201ENSMUST00000175300 92 ntBASIC9.85□□□□□ -0.83
Col18a1P39061 Scgb2b19-201ENSMUST00000179688 520 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col18a1P39061 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col18a1P39061 Sbp-206ENSMUST00000183155 882 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
Col18a1P39061 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC9.85□□□□□ -0.83
Col18a1P39061 Fcer1g-203ENSMUST00000193973 683 ntTSL 3 BASIC9.85□□□□□ -0.83
Col18a1P39061 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC9.85□□□□□ -0.83
Col18a1P39061 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Col18a1P39061 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC9.85□□□□□ -0.83
Col18a1P39061 Gm19324-201ENSMUST00000213229 1169 ntBASIC9.85□□□□□ -0.83
Col18a1P39061 AC150661.1-201ENSMUST00000222563 495 ntBASIC9.85□□□□□ -0.83
Col18a1P39061 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Col18a1P39061 Fpr-rs4-201ENSMUST00000095651 972 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Col18a1P39061 Utp14a-201ENSMUST00000080713 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col18a1P39061 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col18a1P39061 Gm43168-201ENSMUST00000201039 1612 ntBASIC9.85□□□□□ -0.83
Col18a1P39061 Gm29113-201ENSMUST00000185991 3432 ntBASIC9.85□□□□□ -0.83
Col18a1P39061 Sh3bgrl2-201ENSMUST00000113215 4565 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Col18a1P39061 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Col18a1P39061 Gm43335-201ENSMUST00000198299 3276 ntBASIC9.84□□□□□ -0.83
Col18a1P39061 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Col18a1P39061 Hmgxb4-201ENSMUST00000041759 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Col18a1P39061 Gm43080-201ENSMUST00000199006 2643 ntBASIC9.84□□□□□ -0.83
Col18a1P39061 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Col18a1P39061 Diexf-201ENSMUST00000085555 5570 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Col18a1P39061 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC9.84□□□□□ -0.83
Col18a1P39061 Gm24286-201ENSMUST00000157632 128 ntBASIC9.84□□□□□ -0.83
Col18a1P39061 Gm25435-201ENSMUST00000158277 267 ntBASIC9.84□□□□□ -0.83
Col18a1P39061 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Col18a1P39061 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC9.84□□□□□ -0.83
Col18a1P39061 Fxyd1-212ENSMUST00000206305 568 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Col18a1P39061 Mir296-201ENSMUST00000083587 79 ntBASIC9.84□□□□□ -0.83
Col18a1P39061 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Col18a1P39061 Btg1-201ENSMUST00000038377 5001 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Col18a1P39061 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Col18a1P39061 Cdkn1b-202ENSMUST00000067327 4552 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Col18a1P39061 Nktr-201ENSMUST00000035112 7022 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Col18a1P39061 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Col18a1P39061 Olfr60-203ENSMUST00000211031 2650 ntAPPRIS P1 TSL 3 BASIC9.84□□□□□ -0.83
Col18a1P39061 Olfr60-204ENSMUST00000215023 2692 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Col18a1P39061 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Col18a1P39061 4933430H16Rik-201ENSMUST00000209078 1319 ntTSL 5 BASIC9.84□□□□□ -0.83
Col18a1P39061 Zkscan5-201ENSMUST00000031601 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Col18a1P39061 Cdh13-201ENSMUST00000117160 3785 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Col18a1P39061 Luzp1-207ENSMUST00000170102 7526 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Col18a1P39061 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Col18a1P39061 Gm42460-201ENSMUST00000198863 2567 ntBASIC9.83□□□□□ -0.84
Col18a1P39061 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Col18a1P39061 Ctage5-220ENSMUST00000177225 2872 ntTSL 5 BASIC9.83□□□□□ -0.84
Col18a1P39061 Plscr2-202ENSMUST00000113044 1239 ntTSL 3 BASIC9.83□□□□□ -0.84
Col18a1P39061 BC064078-201ENSMUST00000122939 570 ntBASIC9.83□□□□□ -0.84
Col18a1P39061 Gm26410-201ENSMUST00000157670 261 ntBASIC9.83□□□□□ -0.84
Col18a1P39061 Gm24176-201ENSMUST00000158928 121 ntBASIC9.83□□□□□ -0.84
Col18a1P39061 Speer1-201ENSMUST00000172106 1123 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Col18a1P39061 Gm4152-201ENSMUST00000172675 259 ntBASIC9.83□□□□□ -0.84
Col18a1P39061 Gm27348-201ENSMUST00000184511 170 ntBASIC9.83□□□□□ -0.84
Col18a1P39061 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Col18a1P39061 Gm29784-201ENSMUST00000196217 406 ntBASIC9.83□□□□□ -0.84
Col18a1P39061 Gm42673-201ENSMUST00000202676 337 ntBASIC9.83□□□□□ -0.84
Col18a1P39061 Gm39090-202ENSMUST00000205992 508 ntTSL 5 BASIC9.83□□□□□ -0.84
Col18a1P39061 4930513N20Rik-201ENSMUST00000207466 1265 ntBASIC9.83□□□□□ -0.84
Col18a1P39061 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC9.83□□□□□ -0.84
Col18a1P39061 Olfr32-206ENSMUST00000215765 1241 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms