Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 Olfr721-ps1-201ENSMUST00000165291 975 ntBASIC6.48□□□□□ -1.37
Cd28P31041 Ighv1-33-201ENSMUST00000193220 350 ntBASIC6.48□□□□□ -1.37
Cd28P31041 Gm6312-201ENSMUST00000204060 1194 ntBASIC6.48□□□□□ -1.37
Cd28P31041 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC6.48□□□□□ -1.37
Cd28P31041 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC6.48□□□□□ -1.37
Cd28P31041 Gm44588-201ENSMUST00000208401 545 ntTSL 5 BASIC6.48□□□□□ -1.37
Cd28P31041 Gm35392-201ENSMUST00000209934 2121 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Cd28P31041 Gm6989-201ENSMUST00000218409 654 ntBASIC6.48□□□□□ -1.37
Cd28P31041 AC112259.1-201ENSMUST00000222891 853 ntTSL 2 BASIC6.48□□□□□ -1.37
Cd28P31041 Gm46323-201ENSMUST00000223136 628 ntTSL 5 BASIC6.48□□□□□ -1.37
Cd28P31041 Zfp389-202ENSMUST00000224437 1234 ntBASIC6.48□□□□□ -1.37
Cd28P31041 AC099629.1-201ENSMUST00000226778 464 ntBASIC6.48□□□□□ -1.37
Cd28P31041 AC122309.1-201ENSMUST00000226945 421 ntBASIC6.48□□□□□ -1.37
Cd28P31041 Gm7086-202ENSMUST00000228849 506 ntBASIC6.48□□□□□ -1.37
Cd28P31041 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cd28P31041 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cd28P31041 Trex1-201ENSMUST00000061973 1084 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cd28P31041 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cd28P31041 Gm25259-201ENSMUST00000083048 193 ntBASIC6.48□□□□□ -1.37
Cd28P31041 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Cd28P31041 Gm43728-201ENSMUST00000198817 2622 ntBASIC6.48□□□□□ -1.37
Cd28P31041 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cd28P31041 Plekhh2-201ENSMUST00000047206 6886 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cd28P31041 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cd28P31041 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
Cd28P31041 Dennd6a-203ENSMUST00000224111 2692 ntBASIC6.48□□□□□ -1.37
Cd28P31041 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Cd28P31041 Gm42546-201ENSMUST00000201584 2592 ntBASIC6.48□□□□□ -1.37
Cd28P31041 Gm38288-201ENSMUST00000195330 1320 ntBASIC6.48□□□□□ -1.37
Cd28P31041 Gm45887-201ENSMUST00000212672 2998 ntBASIC6.48□□□□□ -1.37
Cd28P31041 Gm4952-201ENSMUST00000092931 2212 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Cd28P31041 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cd28P31041 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Cd28P31041 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cd28P31041 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Cd28P31041 Mum1l1-201ENSMUST00000113041 4343 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Cd28P31041 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Cd28P31041 AC174797.5-201ENSMUST00000225055 1860 ntBASIC6.47□□□□□ -1.37
Cd28P31041 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cd28P31041 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Cd28P31041 CT025566.1-202ENSMUST00000224800 2511 ntBASIC6.47□□□□□ -1.37
Cd28P31041 Pcdh15-208ENSMUST00000125006 4863 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Cd28P31041 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Cd28P31041 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
Cd28P31041 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Cd28P31041 Rab1a-206ENSMUST00000163483 2657 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cd28P31041 Nyap2-203ENSMUST00000123285 7501 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cd28P31041 Eci2-203ENSMUST00000110251 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cd28P31041 Gm13456-201ENSMUST00000118928 1365 ntBASIC6.47□□□□□ -1.37
Cd28P31041 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cd28P31041 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Cd28P31041 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Cd28P31041 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Cd28P31041 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Cd28P31041 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Cd28P31041 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cd28P31041 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cd28P31041 Mir744-201ENSMUST00000103261 100 ntBASIC6.47□□□□□ -1.37
Cd28P31041 n-R5s51-201ENSMUST00000104473 123 ntBASIC6.47□□□□□ -1.37
Cd28P31041 Gm15422-201ENSMUST00000117453 541 ntBASIC6.47□□□□□ -1.37
Cd28P31041 Gm12593-201ENSMUST00000120981 743 ntBASIC6.47□□□□□ -1.37
Cd28P31041 Gm14749-201ENSMUST00000121269 333 ntBASIC6.47□□□□□ -1.37
Cd28P31041 4930455G09Rik-201ENSMUST00000126231 630 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Cd28P31041 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Cd28P31041 Mir1983-201ENSMUST00000157523 132 ntBASIC6.47□□□□□ -1.37
Cd28P31041 Gm22262-201ENSMUST00000158713 86 ntBASIC6.47□□□□□ -1.37
Cd28P31041 Gm16280-201ENSMUST00000162458 623 ntTSL 3 BASIC6.47□□□□□ -1.37
Cd28P31041 Lgals1-ps2-201ENSMUST00000170221 519 ntBASIC6.47□□□□□ -1.37
Cd28P31041 Gm10012-202ENSMUST00000170379 372 ntBASIC6.47□□□□□ -1.37
Cd28P31041 Gm23164-201ENSMUST00000175084 111 ntBASIC6.47□□□□□ -1.37
Cd28P31041 1500004A13Rik-201ENSMUST00000183374 891 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Cd28P31041 Scgb2b30-201ENSMUST00000187013 336 ntBASIC6.47□□□□□ -1.37
Cd28P31041 Tmem265-202ENSMUST00000190278 587 ntTSL 3 BASIC6.47□□□□□ -1.37
Cd28P31041 Scgb2b10-201ENSMUST00000191403 318 ntBASIC6.47□□□□□ -1.37
Cd28P31041 Gm29462-201ENSMUST00000191458 288 ntBASIC6.47□□□□□ -1.37
Cd28P31041 5430433H01Rik-201ENSMUST00000193978 542 ntBASIC6.47□□□□□ -1.37
Cd28P31041 Gm38289-201ENSMUST00000194273 597 ntTSL 5 BASIC6.47□□□□□ -1.37
Cd28P31041 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC6.47□□□□□ -1.37
Cd28P31041 Gm19175-201ENSMUST00000199895 916 ntBASIC6.47□□□□□ -1.37
Cd28P31041 Gm43008-201ENSMUST00000202346 286 ntBASIC6.47□□□□□ -1.37
Cd28P31041 Gm4536-201ENSMUST00000209157 542 ntBASIC6.47□□□□□ -1.37
Cd28P31041 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC6.47□□□□□ -1.37
Cd28P31041 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC6.47□□□□□ -1.37
Cd28P31041 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Cd28P31041 Thyn1-201ENSMUST00000039161 918 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cd28P31041 Rpl22l1-201ENSMUST00000043867 552 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cd28P31041 Glipr1-201ENSMUST00000074805 1081 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cd28P31041 Actl11-201ENSMUST00000085073 3993 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Cd28P31041 Gm38380-201ENSMUST00000195718 2248 ntBASIC6.47□□□□□ -1.37
Cd28P31041 1700095J07Rik-201ENSMUST00000128017 1405 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Cd28P31041 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
Cd28P31041 4930471M09Rik-202ENSMUST00000206475 1990 ntBASIC6.47□□□□□ -1.37
Cd28P31041 Gm45084-201ENSMUST00000207096 1957 ntBASIC6.47□□□□□ -1.37
Cd28P31041 Wac-202ENSMUST00000092112 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cd28P31041 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cd28P31041 Gm12021-201ENSMUST00000121061 1746 ntBASIC6.47□□□□□ -1.37
Cd28P31041 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Cd28P31041 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cd28P31041 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Cd28P31041 AC153143.1-201ENSMUST00000222966 1340 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms