Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm19092-201ENSMUST00000209036 969 ntBASIC6.26□□□□□ -1.41
Col8a2P25318 Gm45319-201ENSMUST00000210220 318 ntBASIC6.26□□□□□ -1.41
Col8a2P25318 AC163296.1-202ENSMUST00000218395 661 ntBASIC6.26□□□□□ -1.41
Col8a2P25318 AC166361.1-201ENSMUST00000218567 403 ntTSL 3 BASIC6.26□□□□□ -1.41
Col8a2P25318 AC163296.1-201ENSMUST00000220004 1266 ntBASIC6.26□□□□□ -1.41
Col8a2P25318 AV026068-229ENSMUST00000225516 595 ntBASIC6.26□□□□□ -1.41
Col8a2P25318 AC154627.1-201ENSMUST00000228799 1286 ntBASIC6.26□□□□□ -1.41
Col8a2P25318 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a2P25318 Zfp120-202ENSMUST00000094538 1245 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Col8a2P25318 Mcmdc2-201ENSMUST00000052843 2826 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a2P25318 Nek10-206ENSMUST00000224491 9567 ntAPPRIS P2 BASIC6.26□□□□□ -1.41
Col8a2P25318 5430403N17Rik-201ENSMUST00000210717 2553 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a2P25318 Gm42973-201ENSMUST00000197913 3200 ntBASIC6.26□□□□□ -1.41
Col8a2P25318 Depdc5-204ENSMUST00000119705 7929 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a2P25318 Gm28884-201ENSMUST00000190367 3994 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a2P25318 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a2P25318 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a2P25318 Gm11733-201ENSMUST00000092394 2311 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
Col8a2P25318 CT010505.3-201ENSMUST00000227835 1651 ntBASIC6.26□□□□□ -1.41
Col8a2P25318 A430072C10Rik-201ENSMUST00000197848 2532 ntBASIC6.26□□□□□ -1.41
Col8a2P25318 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a2P25318 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a2P25318 Dnajc6-201ENSMUST00000038207 5258 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Col8a2P25318 Gm43221-201ENSMUST00000197612 2071 ntBASIC6.26□□□□□ -1.41
Col8a2P25318 Gm15731-201ENSMUST00000146887 2195 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a2P25318 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a2P25318 Gm38661-201ENSMUST00000216555 5814 ntTSL 5 BASIC6.25□□□□□ -1.41
Col8a2P25318 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a2P25318 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC6.25□□□□□ -1.41
Col8a2P25318 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a2P25318 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a2P25318 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC6.25□□□□□ -1.41
Col8a2P25318 Afm-201ENSMUST00000113179 2038 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a2P25318 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a2P25318 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a2P25318 Gm6866-201ENSMUST00000188559 2549 ntBASIC6.25□□□□□ -1.41
Col8a2P25318 Ctnnd1-213ENSMUST00000111687 6030 ntTSL 5 BASIC6.25□□□□□ -1.41
Col8a2P25318 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC6.25□□□□□ -1.41
Col8a2P25318 Trpv5-201ENSMUST00000031901 3243 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a2P25318 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Col8a2P25318 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Col8a2P25318 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a2P25318 Gm15644-201ENSMUST00000121764 387 ntBASIC6.25□□□□□ -1.41
Col8a2P25318 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC6.25□□□□□ -1.41
Col8a2P25318 Gm12319-201ENSMUST00000131642 357 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a2P25318 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC6.25□□□□□ -1.41
Col8a2P25318 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC6.25□□□□□ -1.41
Col8a2P25318 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a2P25318 Gm22000-201ENSMUST00000153087 730 ntTSL 5 BASIC6.25□□□□□ -1.41
Col8a2P25318 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a2P25318 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a2P25318 Gm21430-201ENSMUST00000182998 998 ntBASIC6.25□□□□□ -1.41
Col8a2P25318 Mocs2-212ENSMUST00000184214 551 ntTSL 3 BASIC6.25□□□□□ -1.41
Col8a2P25318 Mir7005-201ENSMUST00000185089 69 ntBASIC6.25□□□□□ -1.41
Col8a2P25318 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC6.25□□□□□ -1.41
Col8a2P25318 Ly6e-208ENSMUST00000188042 714 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Col8a2P25318 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC6.25□□□□□ -1.41
Col8a2P25318 Gm29008-201ENSMUST00000189387 298 ntBASIC6.25□□□□□ -1.41
Col8a2P25318 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC6.25□□□□□ -1.41
Col8a2P25318 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC6.25□□□□□ -1.41
Col8a2P25318 Gm4780-201ENSMUST00000213206 1242 ntBASIC6.25□□□□□ -1.41
Col8a2P25318 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a2P25318 Gm18226-201ENSMUST00000215261 521 ntBASIC6.25□□□□□ -1.41
Col8a2P25318 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC6.25□□□□□ -1.41
Col8a2P25318 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a2P25318 AC164424.3-201ENSMUST00000220809 148 ntBASIC6.25□□□□□ -1.41
Col8a2P25318 AC166358.8-201ENSMUST00000223288 105 ntBASIC6.25□□□□□ -1.41
Col8a2P25318 AC124739.1-201ENSMUST00000223433 148 ntBASIC6.25□□□□□ -1.41
Col8a2P25318 CT025639.2-201ENSMUST00000224440 1220 ntBASIC6.25□□□□□ -1.41
Col8a2P25318 AC154487.1-201ENSMUST00000224649 226 ntBASIC6.25□□□□□ -1.41
Col8a2P25318 AC118249.1-201ENSMUST00000224822 608 ntBASIC6.25□□□□□ -1.41
Col8a2P25318 AC138604.2-201ENSMUST00000226620 921 ntBASIC6.25□□□□□ -1.41
Col8a2P25318 AC154692.1-202ENSMUST00000226632 1231 ntBASIC6.25□□□□□ -1.41
Col8a2P25318 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Col8a2P25318 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a2P25318 Olfr384-201ENSMUST00000072993 939 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Col8a2P25318 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Col8a2P25318 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a2P25318 Gm44165-201ENSMUST00000203093 1469 ntBASIC6.25□□□□□ -1.41
Col8a2P25318 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a2P25318 Akr1c19-202ENSMUST00000118663 5832 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Col8a2P25318 Ahi1-202ENSMUST00000163505 2067 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a2P25318 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Col8a2P25318 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Col8a2P25318 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a2P25318 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a2P25318 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a2P25318 B230354K17Rik-201ENSMUST00000181149 4897 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a2P25318 Plch1-201ENSMUST00000048134 6259 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a2P25318 Ikbkg-206ENSMUST00000114130 6736 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Col8a2P25318 Gm7265-201ENSMUST00000192735 3502 ntBASIC6.25□□□□□ -1.41
Col8a2P25318 9330158H04Rik-206ENSMUST00000161161 3103 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a2P25318 Cfl2-201ENSMUST00000078124 2940 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a2P25318 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a2P25318 Gm10764-202ENSMUST00000220397 2335 ntBASIC6.25□□□□□ -1.41
Col8a2P25318 Gm42678-201ENSMUST00000197163 2221 ntBASIC6.25□□□□□ -1.41
Col8a2P25318 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a2P25318 A730085K08Rik-201ENSMUST00000177015 2013 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Col8a2P25318 Card6-201ENSMUST00000118365 5995 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Col8a2P25318 Usp37-205ENSMUST00000189257 4974 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms