Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm20121-201ENSMUST00000198547 1594 ntBASIC6.03□□□□□ -1.44
Sdc1P18828 Glod4-209ENSMUST00000170710 1445 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sdc1P18828 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sdc1P18828 Dnhd1-201ENSMUST00000106776 1146 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sdc1P18828 Lypd8-202ENSMUST00000108826 1219 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sdc1P18828 Gm12851-201ENSMUST00000117920 421 ntBASIC6.03□□□□□ -1.44
Sdc1P18828 Ccdc50-ps-201ENSMUST00000118044 941 ntBASIC6.03□□□□□ -1.44
Sdc1P18828 Gm7541-201ENSMUST00000118361 535 ntBASIC6.03□□□□□ -1.44
Sdc1P18828 Gm14158-201ENSMUST00000118409 308 ntBASIC6.03□□□□□ -1.44
Sdc1P18828 Gm15616-201ENSMUST00000118662 375 ntBASIC6.03□□□□□ -1.44
Sdc1P18828 Gm12170-201ENSMUST00000119281 300 ntBASIC6.03□□□□□ -1.44
Sdc1P18828 Gm14528-201ENSMUST00000120615 231 ntBASIC6.03□□□□□ -1.44
Sdc1P18828 Gm13402-201ENSMUST00000153600 424 ntTSL 5 BASIC6.03□□□□□ -1.44
Sdc1P18828 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
Sdc1P18828 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sdc1P18828 Gm25306-201ENSMUST00000175288 117 ntBASIC6.03□□□□□ -1.44
Sdc1P18828 Gm5973-201ENSMUST00000178542 496 ntBASIC6.03□□□□□ -1.44
Sdc1P18828 Gm21182-201ENSMUST00000178899 794 ntBASIC6.03□□□□□ -1.44
Sdc1P18828 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sdc1P18828 4930533D04Rik-201ENSMUST00000185478 788 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sdc1P18828 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC6.03□□□□□ -1.44
Sdc1P18828 Gm42932-201ENSMUST00000197280 744 ntBASIC6.03□□□□□ -1.44
Sdc1P18828 1700041I07Rik-201ENSMUST00000197536 435 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sdc1P18828 Igkv12-42-201ENSMUST00000198769 327 ntBASIC6.03□□□□□ -1.44
Sdc1P18828 Gm43725-201ENSMUST00000200122 369 ntBASIC6.03□□□□□ -1.44
Sdc1P18828 Gm2762-203ENSMUST00000201658 1234 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sdc1P18828 Gm44173-201ENSMUST00000204316 132 ntBASIC6.03□□□□□ -1.44
Sdc1P18828 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC6.03□□□□□ -1.44
Sdc1P18828 Eif3k-202ENSMUST00000207683 647 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sdc1P18828 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sdc1P18828 Gm45408-201ENSMUST00000211080 390 ntTSL 5 BASIC6.03□□□□□ -1.44
Sdc1P18828 Gm4800-201ENSMUST00000215776 1266 ntBASIC6.03□□□□□ -1.44
Sdc1P18828 AC192091.1-201ENSMUST00000218668 439 ntBASIC6.03□□□□□ -1.44
Sdc1P18828 Gm9249-201ENSMUST00000221420 578 ntBASIC6.03□□□□□ -1.44
Sdc1P18828 Hspe1-ps1-201ENSMUST00000222955 330 ntBASIC6.03□□□□□ -1.44
Sdc1P18828 AC140375.1-201ENSMUST00000225421 694 ntBASIC6.03□□□□□ -1.44
Sdc1P18828 Gm11437-201ENSMUST00000050771 1239 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sdc1P18828 6030452D12Rik-201ENSMUST00000066875 669 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sdc1P18828 Rpl21-ps3-201ENSMUST00000080223 483 ntBASIC6.03□□□□□ -1.44
Sdc1P18828 Rpl7a-ps8-201ENSMUST00000094754 801 ntBASIC6.03□□□□□ -1.44
Sdc1P18828 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sdc1P18828 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sdc1P18828 Olfr432-203ENSMUST00000213381 4533 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Sdc1P18828 Olfr90-206ENSMUST00000217397 2680 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Sdc1P18828 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Sdc1P18828 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sdc1P18828 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sdc1P18828 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sdc1P18828 Gm37980-201ENSMUST00000194420 1910 ntBASIC6.03□□□□□ -1.44
Sdc1P18828 Gm10184-201ENSMUST00000086423 1939 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sdc1P18828 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sdc1P18828 Ap2b1-202ENSMUST00000065692 3269 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sdc1P18828 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sdc1P18828 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
Sdc1P18828 AC124581.3-201ENSMUST00000224270 1624 ntBASIC6.03□□□□□ -1.44
Sdc1P18828 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sdc1P18828 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sdc1P18828 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sdc1P18828 Gm14849-201ENSMUST00000122293 2846 ntBASIC6.03□□□□□ -1.44
Sdc1P18828 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC6.03□□□□□ -1.44
Sdc1P18828 Dennd2c-202ENSMUST00000172288 4979 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sdc1P18828 AC159810.1-201ENSMUST00000214838 1480 ntBASIC6.02□□□□□ -1.44
Sdc1P18828 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.44
Sdc1P18828 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC6.02□□□□□ -1.44
Sdc1P18828 Gm45290-201ENSMUST00000211177 3890 ntBASIC6.02□□□□□ -1.45
Sdc1P18828 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Sdc1P18828 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Sdc1P18828 Adgrl3-207ENSMUST00000118078 4871 ntTSL 5 BASIC6.02□□□□□ -1.45
Sdc1P18828 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sdc1P18828 Zp4-ps-201ENSMUST00000220980 1561 ntBASIC6.02□□□□□ -1.45
Sdc1P18828 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Sdc1P18828 Mdga2-210ENSMUST00000222167 2871 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sdc1P18828 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC6.02□□□□□ -1.45
Sdc1P18828 Gm14245-201ENSMUST00000118939 1843 ntBASIC6.02□□□□□ -1.45
Sdc1P18828 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Sdc1P18828 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sdc1P18828 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Sdc1P18828 Tbxas1-206ENSMUST00000162521 1427 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sdc1P18828 Gm8127-201ENSMUST00000163655 1427 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Sdc1P18828 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sdc1P18828 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Sdc1P18828 Trappc2-201ENSMUST00000112192 1294 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sdc1P18828 Gm12038-201ENSMUST00000117322 207 ntBASIC6.02□□□□□ -1.45
Sdc1P18828 Gm12181-201ENSMUST00000121448 531 ntBASIC6.02□□□□□ -1.45
Sdc1P18828 Gm12630-201ENSMUST00000121575 784 ntBASIC6.02□□□□□ -1.45
Sdc1P18828 Gm12920-201ENSMUST00000121818 1186 ntBASIC6.02□□□□□ -1.45
Sdc1P18828 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sdc1P18828 Gm12648-201ENSMUST00000126270 656 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sdc1P18828 Bcas1os2-201ENSMUST00000131931 1174 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sdc1P18828 Tsc22d1-205ENSMUST00000133224 786 ntTSL 2 BASIC6.02□□□□□ -1.45
Sdc1P18828 Gm12708-202ENSMUST00000136941 1046 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sdc1P18828 Gm11300-201ENSMUST00000137651 565 ntTSL 5 BASIC6.02□□□□□ -1.45
Sdc1P18828 A630023P12Rik-202ENSMUST00000141420 495 ntTSL 2 BASIC6.02□□□□□ -1.45
Sdc1P18828 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sdc1P18828 Gm23740-201ENSMUST00000157385 100 ntBASIC6.02□□□□□ -1.45
Sdc1P18828 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC6.02□□□□□ -1.45
Sdc1P18828 Gm3002-202ENSMUST00000178256 444 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Sdc1P18828 Gm2974-202ENSMUST00000180184 447 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Sdc1P18828 Gm27199-201ENSMUST00000185026 623 ntTSL 2 BASIC6.02□□□□□ -1.45
Sdc1P18828 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms