Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx1P18111 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx1P18111 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx1P18111 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx1P18111 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx1P18111 Mitf-203ENSMUST00000101123 2144 ntTSL 5 BASIC6.17□□□□□ -1.42
Cdx1P18111 Mitf-204ENSMUST00000113339 2144 ntTSL 5 BASIC6.17□□□□□ -1.42
Cdx1P18111 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx1P18111 Gm21036-201ENSMUST00000207544 2611 ntBASIC6.17□□□□□ -1.42
Cdx1P18111 AC103672.2-201ENSMUST00000228146 1687 ntBASIC6.17□□□□□ -1.42
Cdx1P18111 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC6.17□□□□□ -1.42
Cdx1P18111 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx1P18111 Zfp280d-217ENSMUST00000184517 3919 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx1P18111 Gm37410-201ENSMUST00000193623 3039 ntBASIC6.17□□□□□ -1.42
Cdx1P18111 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Cdx1P18111 CT030185.1-201ENSMUST00000222940 2289 ntBASIC6.17□□□□□ -1.42
Cdx1P18111 Ms4a4d-201ENSMUST00000025581 1513 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx1P18111 A530040E14Rik-201ENSMUST00000093501 1515 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx1P18111 Gm22268-201ENSMUST00000104009 131 ntBASIC6.17□□□□□ -1.42
Cdx1P18111 Sat2-202ENSMUST00000108656 968 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx1P18111 Arpc3-204ENSMUST00000111716 838 ntTSL 2 BASIC6.17□□□□□ -1.42
Cdx1P18111 Gm14692-201ENSMUST00000114672 782 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Cdx1P18111 Gm1140-201ENSMUST00000114675 782 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Cdx1P18111 Gm8644-201ENSMUST00000118619 596 ntBASIC6.17□□□□□ -1.42
Cdx1P18111 Gm16267-201ENSMUST00000140569 732 ntTSL 3 BASIC6.17□□□□□ -1.42
Cdx1P18111 Gm22811-201ENSMUST00000157468 154 ntBASIC6.17□□□□□ -1.42
Cdx1P18111 Gm44370-201ENSMUST00000175436 112 ntBASIC6.17□□□□□ -1.42
Cdx1P18111 Gm18353-201ENSMUST00000185906 784 ntBASIC6.17□□□□□ -1.42
Cdx1P18111 Gm2087-201ENSMUST00000188217 366 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx1P18111 1700016L21Rik-202ENSMUST00000189139 629 ntTSL 3 BASIC6.17□□□□□ -1.42
Cdx1P18111 Gm29068-201ENSMUST00000191607 400 ntBASIC6.17□□□□□ -1.42
Cdx1P18111 Gm2447-201ENSMUST00000191954 544 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx1P18111 Gm38033-201ENSMUST00000192037 269 ntTSL 5 BASIC6.17□□□□□ -1.42
Cdx1P18111 Gm37247-201ENSMUST00000192549 730 ntBASIC6.17□□□□□ -1.42
Cdx1P18111 Gm37185-201ENSMUST00000193852 410 ntBASIC6.17□□□□□ -1.42
Cdx1P18111 Gm42431-201ENSMUST00000196880 323 ntBASIC6.17□□□□□ -1.42
Cdx1P18111 Gm42698-201ENSMUST00000197790 762 ntBASIC6.17□□□□□ -1.42
Cdx1P18111 Gm45238-201ENSMUST00000210204 517 ntTSL 2 BASIC6.17□□□□□ -1.42
Cdx1P18111 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC6.17□□□□□ -1.42
Cdx1P18111 AC160635.1-201ENSMUST00000216731 474 ntBASIC6.17□□□□□ -1.42
Cdx1P18111 AC155269.1-201ENSMUST00000220843 769 ntTSL 5 BASIC6.17□□□□□ -1.42
Cdx1P18111 AV026068-225ENSMUST00000225042 490 ntBASIC6.17□□□□□ -1.42
Cdx1P18111 Klk1b8-201ENSMUST00000072204 859 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx1P18111 Gm8882-201ENSMUST00000080849 1240 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx1P18111 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx1P18111 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx1P18111 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
Cdx1P18111 Olfr329-ps-201ENSMUST00000108822 1300 ntAPPRIS ALT2 TSL 3 BASIC6.17□□□□□ -1.42
Cdx1P18111 Fcgr3-201ENSMUST00000164044 1347 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx1P18111 Lyz2-201ENSMUST00000092163 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx1P18111 Gm4221-202ENSMUST00000181765 2988 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx1P18111 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Cdx1P18111 Serpina1c-201ENSMUST00000074051 1361 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx1P18111 Psd4-210ENSMUST00000166388 4181 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx1P18111 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx1P18111 Rfc1-206ENSMUST00000204965 4751 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cdx1P18111 Gimd1-204ENSMUST00000212804 1462 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Cdx1P18111 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Cdx1P18111 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx1P18111 Gm3854-201ENSMUST00000207173 2950 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Cdx1P18111 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx1P18111 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx1P18111 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx1P18111 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx1P18111 Olfr1238-202ENSMUST00000217226 5241 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Cdx1P18111 Gm37199-201ENSMUST00000193881 4065 ntBASIC6.16□□□□□ -1.42
Cdx1P18111 9930111J21Rik2-202ENSMUST00000101295 5985 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx1P18111 Gm5622-201ENSMUST00000096170 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx1P18111 Gm23358-201ENSMUST00000103887 110 ntBASIC6.16□□□□□ -1.42
Cdx1P18111 Gm15763-201ENSMUST00000120136 403 ntBASIC6.16□□□□□ -1.42
Cdx1P18111 Gm13323-201ENSMUST00000120245 1151 ntBASIC6.16□□□□□ -1.42
Cdx1P18111 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC6.16□□□□□ -1.42
Cdx1P18111 Gm14260-201ENSMUST00000125121 260 ntTSL 5 BASIC6.16□□□□□ -1.42
Cdx1P18111 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx1P18111 Gm11444-201ENSMUST00000146433 575 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Cdx1P18111 4930403D09Rik-201ENSMUST00000147359 635 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx1P18111 Gm26184-201ENSMUST00000157686 131 ntBASIC6.16□□□□□ -1.42
Cdx1P18111 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx1P18111 Gm7393-201ENSMUST00000172650 739 ntBASIC6.16□□□□□ -1.42
Cdx1P18111 Gm4287-201ENSMUST00000174329 585 ntBASIC6.16□□□□□ -1.42
Cdx1P18111 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC6.16□□□□□ -1.42
Cdx1P18111 Gm27651-201ENSMUST00000183465 246 ntBASIC6.16□□□□□ -1.42
Cdx1P18111 Gm27159-201ENSMUST00000185132 432 ntTSL 5 BASIC6.16□□□□□ -1.42
Cdx1P18111 Gm29243-201ENSMUST00000188318 418 ntTSL 5 BASIC6.16□□□□□ -1.42
Cdx1P18111 Gm42472-201ENSMUST00000201626 859 ntBASIC6.16□□□□□ -1.42
Cdx1P18111 Ndufa4-203ENSMUST00000204084 409 ntTSL 3 BASIC6.16□□□□□ -1.42
Cdx1P18111 Gm45155-201ENSMUST00000207365 596 ntTSL 2 BASIC6.16□□□□□ -1.42
Cdx1P18111 Gm45800-201ENSMUST00000210331 700 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Cdx1P18111 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx1P18111 Gm45246-201ENSMUST00000210820 367 ntBASIC6.16□□□□□ -1.42
Cdx1P18111 5830408C22Rik-204ENSMUST00000211653 351 ntTSL 3 BASIC6.16□□□□□ -1.42
Cdx1P18111 Gm40638-201ENSMUST00000216422 682 ntTSL 5 BASIC6.16□□□□□ -1.42
Cdx1P18111 C230072F16Rik-201ENSMUST00000219184 1253 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx1P18111 AC132954.2-201ENSMUST00000222400 403 ntBASIC6.16□□□□□ -1.42
Cdx1P18111 AC207128.1-201ENSMUST00000225928 799 ntBASIC6.16□□□□□ -1.42
Cdx1P18111 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Cdx1P18111 Rpl27-ps3-201ENSMUST00000097682 475 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Cdx1P18111 Olfr1055-201ENSMUST00000099894 1182 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Cdx1P18111 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Cdx1P18111 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms