Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 AC164294.1-201ENSMUST00000224682 688 ntBASIC6.1□□□□□ -1.43
Hmgb3O54879 AC163038.2-201ENSMUST00000224851 650 ntBASIC6.1□□□□□ -1.43
Hmgb3O54879 Mettl21c-201ENSMUST00000061421 1086 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hmgb3O54879 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
Hmgb3O54879 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Hmgb3O54879 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hmgb3O54879 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm42630-201ENSMUST00000195908 3448 ntBASIC6.1□□□□□ -1.43
Hmgb3O54879 Cast-202ENSMUST00000220738 1653 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC6.1□□□□□ -1.43
Hmgb3O54879 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hmgb3O54879 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Hmgb3O54879 Tpbpa-201ENSMUST00000021885 1621 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hmgb3O54879 Sema3d-205ENSMUST00000197927 3207 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Hmgb3O54879 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hmgb3O54879 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Hmgb3O54879 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hmgb3O54879 Gm37206-201ENSMUST00000195512 3069 ntBASIC6.1□□□□□ -1.43
Hmgb3O54879 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
Hmgb3O54879 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Hmgb3O54879 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Hmgb3O54879 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Hmgb3O54879 Gm5975-201ENSMUST00000185256 1399 ntBASIC6.09□□□□□ -1.43
Hmgb3O54879 Kcnk2-209ENSMUST00000194402 1373 ntTSL 5 BASIC6.09□□□□□ -1.43
Hmgb3O54879 Gm18957-201ENSMUST00000197623 1813 ntBASIC6.09□□□□□ -1.43
Hmgb3O54879 CT010453.1-201ENSMUST00000226795 2201 ntBASIC6.09□□□□□ -1.43
Hmgb3O54879 1700010N08Rik-202ENSMUST00000188166 1323 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Hmgb3O54879 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Hmgb3O54879 Gm25761-201ENSMUST00000103983 128 ntBASIC6.09□□□□□ -1.43
Hmgb3O54879 Gm14682-201ENSMUST00000117977 524 ntBASIC6.09□□□□□ -1.43
Hmgb3O54879 Gm8662-201ENSMUST00000118644 574 ntBASIC6.09□□□□□ -1.43
Hmgb3O54879 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Hmgb3O54879 Plgrkt-208ENSMUST00000143467 1020 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Hmgb3O54879 F730035M05Rik-201ENSMUST00000145871 1296 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Hmgb3O54879 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC6.09□□□□□ -1.43
Hmgb3O54879 Gm16585-201ENSMUST00000161442 610 ntBASIC6.09□□□□□ -1.43
Hmgb3O54879 BC049715-202ENSMUST00000163640 744 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Hmgb3O54879 Rnf141-210ENSMUST00000177462 859 ntTSL 5 BASIC6.09□□□□□ -1.43
Hmgb3O54879 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC6.09□□□□□ -1.43
Hmgb3O54879 Gm29491-201ENSMUST00000189481 506 ntTSL 5 BASIC6.09□□□□□ -1.43
Hmgb3O54879 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC6.09□□□□□ -1.43
Hmgb3O54879 Ing5-203ENSMUST00000190476 918 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Hmgb3O54879 Gm37623-201ENSMUST00000193691 803 ntTSL 3 BASIC6.09□□□□□ -1.43
Hmgb3O54879 Gm37799-201ENSMUST00000194018 547 ntTSL 3 BASIC6.09□□□□□ -1.43
Hmgb3O54879 Gm45625-201ENSMUST00000209412 650 ntTSL 5 BASIC6.09□□□□□ -1.43
Hmgb3O54879 Gm32842-201ENSMUST00000212653 738 ntBASIC6.09□□□□□ -1.43
Hmgb3O54879 4930442G15Rik-201ENSMUST00000213112 1000 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Hmgb3O54879 Cinp-205ENSMUST00000221182 774 ntTSL 3 BASIC6.09□□□□□ -1.43
Hmgb3O54879 Gm46379-201ENSMUST00000222551 265 ntBASIC6.09□□□□□ -1.43
Hmgb3O54879 Gm36862-202ENSMUST00000222758 1051 ntTSL 5 BASIC6.09□□□□□ -1.43
Hmgb3O54879 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Hmgb3O54879 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Hmgb3O54879 Gm10490-201ENSMUST00000086274 360 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Hmgb3O54879 Olfr1270-201ENSMUST00000099754 1018 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Hmgb3O54879 Txndc16-204ENSMUST00000128484 2069 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Hmgb3O54879 Gm29824-201ENSMUST00000213183 3285 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Hmgb3O54879 Ap1g1-201ENSMUST00000034171 3692 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Hmgb3O54879 AC153512.1-201ENSMUST00000218961 1603 ntTSL 5 BASIC6.09□□□□□ -1.43
Hmgb3O54879 Gm37945-201ENSMUST00000192536 4367 ntBASIC6.09□□□□□ -1.43
Hmgb3O54879 Clock-204ENSMUST00000202122 5508 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Hmgb3O54879 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Hmgb3O54879 Gm37980-201ENSMUST00000194420 1910 ntBASIC6.09□□□□□ -1.44
Hmgb3O54879 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Hmgb3O54879 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC6.09□□□□□ -1.44
Hmgb3O54879 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC6.09□□□□□ -1.44
Hmgb3O54879 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Hmgb3O54879 Tmem232-202ENSMUST00000086722 2588 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Hmgb3O54879 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Hmgb3O54879 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC6.09□□□□□ -1.44
Hmgb3O54879 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Hmgb3O54879 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC6.08□□□□□ -1.44
Hmgb3O54879 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Hmgb3O54879 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Hmgb3O54879 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC6.08□□□□□ -1.44
Hmgb3O54879 Gm46995-201ENSMUST00000223445 1378 ntBASIC6.08□□□□□ -1.44
Hmgb3O54879 AC154738.6-201ENSMUST00000227225 1352 ntBASIC6.08□□□□□ -1.44
Hmgb3O54879 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Hmgb3O54879 Gm37210-201ENSMUST00000192484 2004 ntBASIC6.08□□□□□ -1.44
Hmgb3O54879 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hmgb3O54879 Gm44850-201ENSMUST00000205621 1329 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Hmgb3O54879 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Hmgb3O54879 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Hmgb3O54879 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hmgb3O54879 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Hmgb3O54879 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Hmgb3O54879 Gm12851-201ENSMUST00000117920 421 ntBASIC6.08□□□□□ -1.44
Hmgb3O54879 Gm15047-201ENSMUST00000118891 454 ntBASIC6.08□□□□□ -1.44
Hmgb3O54879 Gm12687-201ENSMUST00000119752 706 ntBASIC6.08□□□□□ -1.44
Hmgb3O54879 Olfr1374-ps1-201ENSMUST00000120114 936 ntBASIC6.08□□□□□ -1.44
Hmgb3O54879 Gm22342-201ENSMUST00000122647 298 ntBASIC6.08□□□□□ -1.44
Hmgb3O54879 Tsc22d1-205ENSMUST00000133224 786 ntTSL 2 BASIC6.08□□□□□ -1.44
Hmgb3O54879 Gm15343-201ENSMUST00000136382 640 ntTSL 3 BASIC6.08□□□□□ -1.44
Hmgb3O54879 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC6.08□□□□□ -1.44
Hmgb3O54879 S100a10-203ENSMUST00000170612 477 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Hmgb3O54879 Mir3078-201ENSMUST00000175231 87 ntBASIC6.08□□□□□ -1.44
Hmgb3O54879 Gm20629-201ENSMUST00000176157 513 ntTSL 3 BASIC6.08□□□□□ -1.44
Hmgb3O54879 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
Hmgb3O54879 Snhg7-201ENSMUST00000181621 139 ntBASIC6.08□□□□□ -1.44
Hmgb3O54879 Gm28199-201ENSMUST00000187127 619 ntTSL 3 BASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms