Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Harbi1-205ENSMUST00000142692 3686 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Ube3bQ9ES34 Gm42613-201ENSMUST00000199975 1931 ntBASIC9.84□□□□□ -0.83
Ube3bQ9ES34 Sgsh-201ENSMUST00000005173 4357 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Ube3bQ9ES34 Unc45b-201ENSMUST00000018989 3549 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Itsn1-208ENSMUST00000114002 14012 ntAPPRIS P2 TSL 5 BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Ank3-203ENSMUST00000092431 5823 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 AC102431.1-201ENSMUST00000223773 1449 ntBASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Osbpl1a-202ENSMUST00000117361 2687 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Hnrnpk-205ENSMUST00000176207 2653 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Tmem108-201ENSMUST00000049452 3574 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Duxbl2-201ENSMUST00000100810 2312 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Fam168a-201ENSMUST00000049053 6609 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Egf-209ENSMUST00000199615 3211 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Ptger2-201ENSMUST00000046891 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Casr-201ENSMUST00000063597 4534 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Cat-201ENSMUST00000028610 2613 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Glt8d2-201ENSMUST00000020485 2153 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Parp11-203ENSMUST00000112193 1725 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 1700015F17Rik-201ENSMUST00000115447 710 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Gm13573-201ENSMUST00000116410 631 ntBASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Gm12401-201ENSMUST00000118435 228 ntBASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Gm15574-201ENSMUST00000119937 405 ntBASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Gm12517-201ENSMUST00000122082 425 ntBASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Fam229b-206ENSMUST00000136546 592 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Gm11722-201ENSMUST00000138702 534 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Myl2-201ENSMUST00000014080 662 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Gm24962-201ENSMUST00000157917 109 ntBASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Dxo-208ENSMUST00000174092 738 ntTSL 5 BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Gm14214-201ENSMUST00000184654 678 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Gm28126-201ENSMUST00000185286 356 ntTSL 5 BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Gm20257-201ENSMUST00000185352 936 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 4930568A12Rik-201ENSMUST00000186117 498 ntTSL 3 BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Gm28421-201ENSMUST00000186378 356 ntTSL 5 BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Gm28212-201ENSMUST00000187114 356 ntTSL 5 BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Gm28355-201ENSMUST00000187443 356 ntTSL 5 BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Gm29568-201ENSMUST00000187884 356 ntTSL 5 BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Gm29080-201ENSMUST00000188565 356 ntTSL 5 BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Gm28944-201ENSMUST00000188946 356 ntTSL 5 BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Gm28908-201ENSMUST00000189002 356 ntTSL 5 BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Gm29078-201ENSMUST00000190611 356 ntTSL 5 BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Gm37247-201ENSMUST00000192549 730 ntBASIC9.83□□□□□ -0.84
Ube3bQ9ES34 C630050I24Rik-201ENSMUST00000193420 783 ntBASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Gm34217-201ENSMUST00000193562 356 ntTSL 5 BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 AC156795.1-201ENSMUST00000214655 414 ntBASIC9.83□□□□□ -0.84
Ube3bQ9ES34 AC102369.1-201ENSMUST00000218415 373 ntBASIC9.83□□□□□ -0.84
Ube3bQ9ES34 AC162467.1-201ENSMUST00000220254 621 ntBASIC9.83□□□□□ -0.84
Ube3bQ9ES34 AC154851.1-201ENSMUST00000221591 655 ntBASIC9.83□□□□□ -0.84
Ube3bQ9ES34 AC165254.1-203ENSMUST00000222925 574 ntTSL 3 BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 AC134462.1-201ENSMUST00000223047 552 ntTSL 2 BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 CT025603.4-201ENSMUST00000225777 413 ntBASIC9.83□□□□□ -0.84
Ube3bQ9ES34 CT009556.2-201ENSMUST00000227980 1123 ntBASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Nfam1-203ENSMUST00000109503 2834 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Nos1-207ENSMUST00000171055 4388 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Gp1ba-202ENSMUST00000108551 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Pik3cg-207ENSMUST00000220366 4660 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Gm20745-201ENSMUST00000216827 3796 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Camk2a-201ENSMUST00000025519 3244 ntTSL 5 BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Stx8-203ENSMUST00000108675 1497 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Gm34730-201ENSMUST00000210674 4077 ntTSL 5 BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Gm13590-201ENSMUST00000120183 1588 ntBASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Eif2ak4-202ENSMUST00000102527 4906 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Alms1-205ENSMUST00000213058 11163 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Smco3-203ENSMUST00000203468 1791 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Scfd2-201ENSMUST00000072857 3672 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Gm28240-201ENSMUST00000187560 2053 ntBASIC9.83□□□□□ -0.84
Ube3bQ9ES34 Vgll1-203ENSMUST00000114746 2151 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 AC115744.1-201ENSMUST00000222398 2379 ntBASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Dnajc8-202ENSMUST00000094657 1401 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Rbm28-201ENSMUST00000007993 4465 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Trim40-203ENSMUST00000172711 1539 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Tmem268-202ENSMUST00000080336 3630 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Brdt-202ENSMUST00000112677 1607 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Lrtm1-202ENSMUST00000224708 1646 ntAPPRIS ALT2 BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 AC121860.1-201ENSMUST00000227908 2787 ntBASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Ttll7-201ENSMUST00000037942 7394 ntAPPRIS P2 TSL 5 BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Il5ra-201ENSMUST00000167925 1704 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Arhgap4-205ENSMUST00000114407 3051 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Arhgap21-213ENSMUST00000173194 6920 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Lama1-201ENSMUST00000035471 9518 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Gm6368-201ENSMUST00000119727 2147 ntBASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Calcr-201ENSMUST00000075644 3763 ntAPPRIS P4 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Lingo2-204ENSMUST00000108124 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Sh3kbp1-205ENSMUST00000112453 2515 ntTSL 5 BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Sec16b-203ENSMUST00000111700 4369 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 AC163342.1-201ENSMUST00000216533 2718 ntTSL 5 BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Plekha2-201ENSMUST00000064883 5176 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Trbv14-201ENSMUST00000103272 368 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
Ube3bQ9ES34 Gm26469-201ENSMUST00000116765 121 ntBASIC9.82□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms