Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC8.63□□□□□ -1.03
Clp1Q99LI9 Gm7512-201ENSMUST00000195217 1170 ntBASIC8.63□□□□□ -1.03
Clp1Q99LI9 Gm42509-201ENSMUST00000197390 781 ntBASIC8.63□□□□□ -1.03
Clp1Q99LI9 Gm7542-201ENSMUST00000201140 777 ntBASIC8.63□□□□□ -1.03
Clp1Q99LI9 Gm31520-201ENSMUST00000203048 733 ntBASIC8.63□□□□□ -1.03
Clp1Q99LI9 Gm44234-201ENSMUST00000204246 900 ntBASIC8.63□□□□□ -1.03
Clp1Q99LI9 Gm44681-201ENSMUST00000208447 842 ntBASIC8.63□□□□□ -1.03
Clp1Q99LI9 Gm44892-201ENSMUST00000208595 488 ntBASIC8.63□□□□□ -1.03
Clp1Q99LI9 Gm19987-201ENSMUST00000216339 499 ntBASIC8.63□□□□□ -1.03
Clp1Q99LI9 Gm18892-201ENSMUST00000217628 881 ntBASIC8.63□□□□□ -1.03
Clp1Q99LI9 AC153516.1-201ENSMUST00000217955 779 ntBASIC8.63□□□□□ -1.03
Clp1Q99LI9 Gm4796-201ENSMUST00000219802 624 ntBASIC8.63□□□□□ -1.03
Clp1Q99LI9 AC126554.4-201ENSMUST00000221055 409 ntBASIC8.63□□□□□ -1.03
Clp1Q99LI9 7420701I03Rik-201ENSMUST00000222157 737 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Clp1Q99LI9 Mgat4d-201ENSMUST00000038692 1293 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Clp1Q99LI9 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Clp1Q99LI9 Gm6195-201ENSMUST00000063059 357 ntBASIC8.63□□□□□ -1.03
Clp1Q99LI9 Olfr1322-201ENSMUST00000070304 933 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Clp1Q99LI9 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Clp1Q99LI9 Gm24035-201ENSMUST00000082867 107 ntBASIC8.63□□□□□ -1.03
Clp1Q99LI9 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC8.63□□□□□ -1.03
Clp1Q99LI9 Olfr676-201ENSMUST00000098162 954 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
Clp1Q99LI9 Polr1a-201ENSMUST00000055296 9216 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Clp1Q99LI9 Gabra5-203ENSMUST00000206734 2224 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Clp1Q99LI9 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Clp1Q99LI9 Epb42-202ENSMUST00000102490 4115 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Clp1Q99LI9 Plk4-201ENSMUST00000026858 3479 ntAPPRIS P3 TSL 1 (best) BASIC8.63□□□□□ -1.03
Clp1Q99LI9 Plec-205ENSMUST00000073418 15455 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Clp1Q99LI9 Zp4-ps-201ENSMUST00000220980 1561 ntBASIC8.63□□□□□ -1.03
Clp1Q99LI9 Stat1-205ENSMUST00000186574 2834 ntAPPRIS ALT1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Clp1Q99LI9 Snapc4-202ENSMUST00000114115 4368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Clp1Q99LI9 Gm28775-201ENSMUST00000186918 2167 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Clp1Q99LI9 Pde8b-210ENSMUST00000162412 4035 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Clp1Q99LI9 Rlim-202ENSMUST00000121153 7439 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Clp1Q99LI9 Zfp248-201ENSMUST00000069292 3683 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Clp1Q99LI9 Gm44242-201ENSMUST00000204212 2721 ntBASIC8.63□□□□□ -1.03
Clp1Q99LI9 Plxna4-201ENSMUST00000115096 12877 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Clp1Q99LI9 Gm10101-202ENSMUST00000181311 2919 ntBASIC8.63□□□□□ -1.03
Clp1Q99LI9 Ctnnd1-214ENSMUST00000111688 6146 ntTSL 5 BASIC8.63□□□□□ -1.03
Clp1Q99LI9 Dync2h1-202ENSMUST00000139115 2892 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Clp1Q99LI9 Slc2a9-202ENSMUST00000067872 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Clp1Q99LI9 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Clp1Q99LI9 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC8.63□□□□□ -1.03
Clp1Q99LI9 Npr3-204ENSMUST00000228489 1969 ntBASIC8.62□□□□□ -1.03
Clp1Q99LI9 Il1rl1-202ENSMUST00000097772 5302 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Clp1Q99LI9 Fto-203ENSMUST00000128081 4707 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Clp1Q99LI9 Lhx4-201ENSMUST00000027740 5514 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Clp1Q99LI9 Gm43178-201ENSMUST00000197257 1386 ntBASIC8.62□□□□□ -1.03
Clp1Q99LI9 Tnfrsf1b-201ENSMUST00000030336 3818 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Clp1Q99LI9 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Clp1Q99LI9 Vsig1-201ENSMUST00000033806 2707 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Clp1Q99LI9 2600014E21Rik-201ENSMUST00000186411 4805 ntTSL 5 BASIC8.62□□□□□ -1.03
Clp1Q99LI9 Triml2-204ENSMUST00000210136 1552 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Clp1Q99LI9 Arap1-203ENSMUST00000098243 3693 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Clp1Q99LI9 D830032E09Rik-203ENSMUST00000189845 2092 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Clp1Q99LI9 Cd300e-201ENSMUST00000062787 2088 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Clp1Q99LI9 Npnt-201ENSMUST00000042729 3601 ntAPPRIS P4 TSL 1 (best) BASIC8.62□□□□□ -1.03
Clp1Q99LI9 4933432K03Rik-203ENSMUST00000206276 2311 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Clp1Q99LI9 Mir546-201ENSMUST00000102105 121 ntBASIC8.62□□□□□ -1.03
Clp1Q99LI9 Igkv12-89-201ENSMUST00000103335 335 ntAPPRIS ALT2 BASIC8.62□□□□□ -1.03
Clp1Q99LI9 Olfr1062-201ENSMUST00000105213 956 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Clp1Q99LI9 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC8.62□□□□□ -1.03
Clp1Q99LI9 Gm13858-201ENSMUST00000118862 671 ntBASIC8.62□□□□□ -1.03
Clp1Q99LI9 Gm14328-201ENSMUST00000122178 408 ntBASIC8.62□□□□□ -1.03
Clp1Q99LI9 Gm22604-201ENSMUST00000157604 311 ntBASIC8.62□□□□□ -1.03
Clp1Q99LI9 Gm15508-201ENSMUST00000160330 325 ntBASIC8.62□□□□□ -1.03
Clp1Q99LI9 Slc25a5-ps-201ENSMUST00000162199 826 ntBASIC8.62□□□□□ -1.03
Clp1Q99LI9 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Clp1Q99LI9 Traj54-201ENSMUST00000165071 54 ntBASIC8.62□□□□□ -1.03
Clp1Q99LI9 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Clp1Q99LI9 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC8.62□□□□□ -1.03
Clp1Q99LI9 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC8.62□□□□□ -1.03
Clp1Q99LI9 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC8.62□□□□□ -1.03
Clp1Q99LI9 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Clp1Q99LI9 Gm21292-202ENSMUST00000190329 1225 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Clp1Q99LI9 Gm5541-201ENSMUST00000193248 1113 ntBASIC8.62□□□□□ -1.03
Clp1Q99LI9 Gm18428-201ENSMUST00000194986 791 ntBASIC8.62□□□□□ -1.03
Clp1Q99LI9 Gm42857-201ENSMUST00000200823 339 ntBASIC8.62□□□□□ -1.03
Clp1Q99LI9 5033423K11Rik-202ENSMUST00000202802 1162 ntBASIC8.62□□□□□ -1.03
Clp1Q99LI9 Gm4605-201ENSMUST00000203148 625 ntBASIC8.62□□□□□ -1.03
Clp1Q99LI9 Gm8921-201ENSMUST00000204306 649 ntBASIC8.62□□□□□ -1.03
Clp1Q99LI9 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Clp1Q99LI9 Gm45181-201ENSMUST00000207878 449 ntTSL 3 BASIC8.62□□□□□ -1.03
Clp1Q99LI9 Gm31663-202ENSMUST00000208481 1190 ntBASIC8.62□□□□□ -1.03
Clp1Q99LI9 Olfr674-ps1-201ENSMUST00000209383 946 ntBASIC8.62□□□□□ -1.03
Clp1Q99LI9 Gm45382-201ENSMUST00000210607 151 ntBASIC8.62□□□□□ -1.03
Clp1Q99LI9 Gm8512-201ENSMUST00000215367 471 ntBASIC8.62□□□□□ -1.03
Clp1Q99LI9 Olfr949-ps1-201ENSMUST00000215546 949 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Clp1Q99LI9 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC8.62□□□□□ -1.03
Clp1Q99LI9 AC192616.1-201ENSMUST00000221922 132 ntBASIC8.62□□□□□ -1.03
Clp1Q99LI9 AC122533.2-201ENSMUST00000223772 545 ntBASIC8.62□□□□□ -1.03
Clp1Q99LI9 AC167192.4-201ENSMUST00000224087 993 ntBASIC8.62□□□□□ -1.03
Clp1Q99LI9 AC164597.2-201ENSMUST00000226738 603 ntBASIC8.62□□□□□ -1.03
Clp1Q99LI9 AC165154.2-201ENSMUST00000227310 336 ntBASIC8.62□□□□□ -1.03
Clp1Q99LI9 Olfr672-201ENSMUST00000050599 939 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Clp1Q99LI9 Olfr1494-201ENSMUST00000051768 948 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Clp1Q99LI9 Arhgef38-201ENSMUST00000054105 814 ntTSL 5 BASIC8.62□□□□□ -1.03
Clp1Q99LI9 Olfr1502-201ENSMUST00000074221 951 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Clp1Q99LI9 Olfr487-201ENSMUST00000081996 945 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
Clp1Q99LI9 Gm25810-201ENSMUST00000082752 108 ntBASIC8.62□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms