Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Gm37426-201ENSMUST00000195241 2470 ntBASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Pgbd1-204ENSMUST00000148071 2600 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Gm43747-201ENSMUST00000201412 1330 ntBASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Gm13856-201ENSMUST00000126498 1742 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Mmp10-201ENSMUST00000034488 1722 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC7.75□□□□□ -1.17
Trub1Q8C0D0 AC154141.1-201ENSMUST00000208403 4136 ntBASIC7.75□□□□□ -1.17
Trub1Q8C0D0 Gucy1a3-201ENSMUST00000048976 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Amelx-203ENSMUST00000112119 841 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Gm16056-201ENSMUST00000119293 135 ntBASIC7.74□□□□□ -1.17
Trub1Q8C0D0 4930483K19Rik-201ENSMUST00000127576 1237 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Gm26407-201ENSMUST00000158504 307 ntBASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Gm20702-201ENSMUST00000176181 460 ntBASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Trav7n-6-201ENSMUST00000178100 381 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 BC065403-202ENSMUST00000184796 1043 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Gm7200-201ENSMUST00000188426 1163 ntBASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Gm29195-201ENSMUST00000189038 379 ntBASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Gm553-201ENSMUST00000189527 701 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Gm26413-202ENSMUST00000198972 127 ntBASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Gm43694-201ENSMUST00000200773 1119 ntBASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Gm42887-201ENSMUST00000202469 1119 ntBASIC7.74□□□□□ -1.17
Trub1Q8C0D0 1600027J07Rik-201ENSMUST00000209501 489 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 CT009546.3-201ENSMUST00000220914 208 ntBASIC7.74□□□□□ -1.17
Trub1Q8C0D0 AC154382.1-201ENSMUST00000220958 1282 ntBASIC7.74□□□□□ -1.17
Trub1Q8C0D0 AC163041.1-201ENSMUST00000221984 133 ntBASIC7.74□□□□□ -1.17
Trub1Q8C0D0 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Gm5316-201ENSMUST00000050391 270 ntBASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Olfr665-201ENSMUST00000098165 951 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Tex26-205ENSMUST00000201683 1456 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Rfwd3-201ENSMUST00000038739 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Gm42595-201ENSMUST00000196771 1607 ntBASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Adgrl3-211ENSMUST00000120128 6370 ntTSL 5 BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Gm7562-201ENSMUST00000210502 2537 ntBASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Gm44996-201ENSMUST00000208787 2980 ntBASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Vezt-201ENSMUST00000047711 4479 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC7.74□□□□□ -1.17
Trub1Q8C0D0 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trub1Q8C0D0 AC171003.1-201ENSMUST00000221667 1665 ntBASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trub1Q8C0D0 AC154482.1-201ENSMUST00000223248 2483 ntBASIC7.73□□□□□ -1.17
Trub1Q8C0D0 St7-206ENSMUST00000115417 2168 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Trbv14-201ENSMUST00000103272 368 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Gm23529-201ENSMUST00000104562 132 ntBASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
Trub1Q8C0D0 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Gm9141-201ENSMUST00000159355 1007 ntBASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Trav9d-4-201ENSMUST00000167409 307 ntAPPRIS ALT2 BASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Gm31406-201ENSMUST00000192297 671 ntTSL 2 BASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Gm6123-201ENSMUST00000193658 1069 ntBASIC7.73□□□□□ -1.17
Trub1Q8C0D0 A930028O11Rik-201ENSMUST00000197219 1108 ntBASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Gm18131-201ENSMUST00000199241 449 ntBASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Gm18690-201ENSMUST00000204488 985 ntBASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Gm44508-201ENSMUST00000206943 1157 ntBASIC7.73□□□□□ -1.17
Trub1Q8C0D0 AC151904.2-201ENSMUST00000218683 1177 ntBASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Gm9110-201ENSMUST00000219035 617 ntBASIC7.73□□□□□ -1.17
Trub1Q8C0D0 AC164294.1-201ENSMUST00000224682 688 ntBASIC7.73□□□□□ -1.17
Trub1Q8C0D0 AC122309.1-201ENSMUST00000226945 421 ntBASIC7.73□□□□□ -1.17
Trub1Q8C0D0 AC154627.1-201ENSMUST00000228799 1286 ntBASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Gm9801-201ENSMUST00000054860 408 ntBASIC7.73□□□□□ -1.17
Trub1Q8C0D0 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC7.73□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 75 ms