Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Bpifc-201ENSMUST00000061699 2714 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Tpm1P58771 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Tpm1P58771 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Tpm1P58771 Serpind1-201ENSMUST00000023450 2191 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
Tpm1P58771 Vmn1r37-205ENSMUST00000227923 1773 ntAPPRIS P2 BASIC8.32□□□□□ -1.08
Tpm1P58771 9530052C20Rik-201ENSMUST00000181882 1372 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Tpm1P58771 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
Tpm1P58771 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
Tpm1P58771 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC8.32□□□□□ -1.08
Tpm1P58771 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Tpm1P58771 Sos2-203ENSMUST00000182396 3963 ntTSL 5 BASIC8.31□□□□□ -1.08
Tpm1P58771 1700011H14Rik-201ENSMUST00000022398 1349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Tpm1P58771 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Tpm1P58771 Gm42837-201ENSMUST00000197071 2829 ntBASIC8.31□□□□□ -1.08
Tpm1P58771 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Tpm1P58771 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Tpm1P58771 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Tpm1P58771 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Tpm1P58771 Xlr5b-202ENSMUST00000114518 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Tpm1P58771 Xlr5a-204ENSMUST00000179600 1650 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Tpm1P58771 Xlr5a-201ENSMUST00000078574 1650 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Tpm1P58771 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Tpm1P58771 Gm44186-201ENSMUST00000204118 2752 ntBASIC8.31□□□□□ -1.08
Tpm1P58771 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC8.31□□□□□ -1.08
Tpm1P58771 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Tpm1P58771 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Tpm1P58771 Rhox4c-201ENSMUST00000115183 903 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Tpm1P58771 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Tpm1P58771 Gm14056-201ENSMUST00000117198 642 ntBASIC8.31□□□□□ -1.08
Tpm1P58771 Gm14891-201ENSMUST00000117378 596 ntBASIC8.31□□□□□ -1.08
Tpm1P58771 Gm15000-201ENSMUST00000118275 1243 ntBASIC8.31□□□□□ -1.08
Tpm1P58771 Gm9516-201ENSMUST00000119684 424 ntBASIC8.31□□□□□ -1.08
Tpm1P58771 Gm8215-201ENSMUST00000120627 990 ntBASIC8.31□□□□□ -1.08
Tpm1P58771 Gm11474-201ENSMUST00000120814 277 ntBASIC8.31□□□□□ -1.08
Tpm1P58771 Gm13495-201ENSMUST00000121156 537 ntBASIC8.31□□□□□ -1.08
Tpm1P58771 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC8.31□□□□□ -1.08
Tpm1P58771 Gm15520-201ENSMUST00000132097 1203 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Tpm1P58771 Tsc22d1-205ENSMUST00000133224 786 ntTSL 2 BASIC8.31□□□□□ -1.08
Tpm1P58771 Ppp1r2-ps1-201ENSMUST00000178232 621 ntBASIC8.31□□□□□ -1.08
Tpm1P58771 Ppp1r2-ps6-201ENSMUST00000179333 621 ntBASIC8.31□□□□□ -1.08
Tpm1P58771 Gm8529-201ENSMUST00000183298 745 ntBASIC8.31□□□□□ -1.08
Tpm1P58771 Gm43555-201ENSMUST00000196588 310 ntBASIC8.31□□□□□ -1.08
Tpm1P58771 Gm42794-201ENSMUST00000197636 835 ntTSL 3 BASIC8.31□□□□□ -1.08
Tpm1P58771 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC8.31□□□□□ -1.08
Tpm1P58771 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Tpm1P58771 Gm46317-201ENSMUST00000221103 393 ntBASIC8.31□□□□□ -1.08
Tpm1P58771 Gm7986-201ENSMUST00000221336 551 ntBASIC8.31□□□□□ -1.08
Tpm1P58771 1700018F24Rik-201ENSMUST00000031624 1122 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Tpm1P58771 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Tpm1P58771 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC8.31□□□□□ -1.08
Tpm1P58771 Olfr139-201ENSMUST00000050678 948 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Tpm1P58771 Olfr1280-201ENSMUST00000082167 1003 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Tpm1P58771 6330409D20Rik-201ENSMUST00000009695 1119 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Tpm1P58771 Plac8-202ENSMUST00000097437 738 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
Tpm1P58771 Galnt15-202ENSMUST00000164208 3563 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Tpm1P58771 Clasp1-202ENSMUST00000070989 7767 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Tpm1P58771 Exoc2-201ENSMUST00000021785 4256 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Tpm1P58771 Ugt1a6b-201ENSMUST00000113137 2249 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
Tpm1P58771 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Tpm1P58771 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC8.31□□□□□ -1.08
Tpm1P58771 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC8.31□□□□□ -1.08
Tpm1P58771 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Tpm1P58771 Gk-206ENSMUST00000142152 4229 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Tpm1P58771 BC085271-201ENSMUST00000191852 1487 ntBASIC8.31□□□□□ -1.08
Tpm1P58771 4933416E14Rik-202ENSMUST00000137955 1938 ntBASIC8.31□□□□□ -1.08
Tpm1P58771 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
Tpm1P58771 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Tpm1P58771 Zfp809-205ENSMUST00000215618 1313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Tpm1P58771 AC125074.1-201ENSMUST00000227970 1331 ntBASIC8.3□□□□□ -1.08
Tpm1P58771 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Tpm1P58771 Gm26561-201ENSMUST00000180743 1413 ntTSL 5 BASIC8.3□□□□□ -1.08
Tpm1P58771 Sh3d19-201ENSMUST00000107664 6414 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Tpm1P58771 Olfr449-202ENSMUST00000204072 1974 ntAPPRIS P1 TSL 3 BASIC8.3□□□□□ -1.08
Tpm1P58771 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Tpm1P58771 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Tpm1P58771 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Tpm1P58771 Gm21036-201ENSMUST00000207544 2611 ntBASIC8.3□□□□□ -1.08
Tpm1P58771 Gm20731-201ENSMUST00000193462 2288 ntBASIC8.3□□□□□ -1.08
Tpm1P58771 Gabarap-202ENSMUST00000108592 750 ntTSL 3 BASIC8.3□□□□□ -1.08
Tpm1P58771 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Tpm1P58771 Gm12875-201ENSMUST00000118745 344 ntBASIC8.3□□□□□ -1.08
Tpm1P58771 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Tpm1P58771 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Tpm1P58771 Vmn1r113-202ENSMUST00000173723 924 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Tpm1P58771 Gm8004-201ENSMUST00000187782 617 ntBASIC8.3□□□□□ -1.08
Tpm1P58771 Gm43247-201ENSMUST00000198638 481 ntBASIC8.3□□□□□ -1.08
Tpm1P58771 4930557J02Rik-201ENSMUST00000202325 1075 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Tpm1P58771 Gm45060-201ENSMUST00000203293 593 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Tpm1P58771 Mypopos-204ENSMUST00000206381 473 ntTSL 2 BASIC8.3□□□□□ -1.08
Tpm1P58771 Cytl1-201ENSMUST00000073554 974 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Tpm1P58771 Gm22865-201ENSMUST00000083949 214 ntBASIC8.3□□□□□ -1.08
Tpm1P58771 Cst7-201ENSMUST00000089200 986 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Tpm1P58771 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Tpm1P58771 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Tpm1P58771 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Tpm1P58771 Gm4863-201ENSMUST00000196907 1381 ntBASIC8.3□□□□□ -1.08
Tpm1P58771 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Tpm1P58771 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Tpm1P58771 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Tpm1P58771 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms