Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Hoxd8P23463 Crem-218ENSMUST00000139537 807 ntTSL 2 BASIC8.68□□□□□ -1.02
Hoxd8P23463 Gm14457-201ENSMUST00000148069 1161 ntBASIC8.68□□□□□ -1.02
Hoxd8P23463 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Hoxd8P23463 Gm26182-201ENSMUST00000157688 116 ntBASIC8.68□□□□□ -1.02
Hoxd8P23463 Gm24393-201ENSMUST00000158135 97 ntBASIC8.68□□□□□ -1.02
Hoxd8P23463 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Hoxd8P23463 U2af1l4-205ENSMUST00000163482 668 ntTSL 5 BASIC8.68□□□□□ -1.02
Hoxd8P23463 Gm17660-201ENSMUST00000164471 520 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Hoxd8P23463 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
Hoxd8P23463 Zfp950-206ENSMUST00000178819 171 ntBASIC8.68□□□□□ -1.02
Hoxd8P23463 Trav9d-2-201ENSMUST00000178824 337 ntAPPRIS ALT2 BASIC8.68□□□□□ -1.02
Hoxd8P23463 Trav9n-2-201ENSMUST00000180097 337 ntAPPRIS ALT2 BASIC8.68□□□□□ -1.02
Hoxd8P23463 Gm26929-201ENSMUST00000182703 753 ntBASIC8.68□□□□□ -1.02
Hoxd8P23463 Gm28958-201ENSMUST00000185864 703 ntBASIC8.68□□□□□ -1.02
Hoxd8P23463 2310043L19Rik-201ENSMUST00000189507 698 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Hoxd8P23463 Gm38242-201ENSMUST00000192354 430 ntTSL 5 BASIC8.68□□□□□ -1.02
Hoxd8P23463 Gm37395-201ENSMUST00000194721 697 ntBASIC8.68□□□□□ -1.02
Hoxd8P23463 Tas2r145-ps3-201ENSMUST00000204526 992 ntBASIC8.68□□□□□ -1.02
Hoxd8P23463 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Hoxd8P23463 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Hoxd8P23463 Gm4374-201ENSMUST00000204929 424 ntBASIC8.68□□□□□ -1.02
Hoxd8P23463 Ceacam-ps1-201ENSMUST00000205380 794 ntTSL 2 BASIC8.68□□□□□ -1.02
Hoxd8P23463 AC153957.1-201ENSMUST00000215235 229 ntBASIC8.68□□□□□ -1.02
Hoxd8P23463 AC160338.2-201ENSMUST00000215508 281 ntTSL 5 BASIC8.68□□□□□ -1.02
Hoxd8P23463 AC158239.1-201ENSMUST00000216890 779 ntTSL 5 BASIC8.68□□□□□ -1.02
Hoxd8P23463 B230303A05Rik-202ENSMUST00000220728 478 ntBASIC8.68□□□□□ -1.02
Hoxd8P23463 AC137950.1-201ENSMUST00000228553 515 ntBASIC8.68□□□□□ -1.02
Hoxd8P23463 Gm7086-202ENSMUST00000228849 506 ntBASIC8.68□□□□□ -1.02
Hoxd8P23463 Slurp2-201ENSMUST00000057932 545 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Hoxd8P23463 Olfr1331-201ENSMUST00000094831 954 ntAPPRIS P2 BASIC8.68□□□□□ -1.02
Hoxd8P23463 Gm10118-201ENSMUST00000079279 2569 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Hoxd8P23463 Dcaf11-201ENSMUST00000072530 2601 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Hoxd8P23463 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Hoxd8P23463 Cpa4-201ENSMUST00000049251 2739 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Hoxd8P23463 EU599041-203ENSMUST00000205748 1492 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Hoxd8P23463 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC8.68□□□□□ -1.02
Hoxd8P23463 Dtna-201ENSMUST00000047954 1596 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Hoxd8P23463 Spef2-205ENSMUST00000162780 1639 ntTSL 5 BASIC8.68□□□□□ -1.02
Hoxd8P23463 Cdkl5-205ENSMUST00000198931 9796 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Hoxd8P23463 Aph1b-201ENSMUST00000034934 4910 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Hoxd8P23463 Hcfc1-202ENSMUST00000114372 8262 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Hoxd8P23463 Pdgfrb-202ENSMUST00000115274 5423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Hoxd8P23463 Champ1-202ENSMUST00000128557 3977 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Hoxd8P23463 Ctsl-205ENSMUST00000222517 6168 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Hoxd8P23463 Irgm1-202ENSMUST00000097271 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Hoxd8P23463 Gm45705-201ENSMUST00000211831 2134 ntBASIC8.68□□□□□ -1.02
Hoxd8P23463 Trpd52l3-201ENSMUST00000025727 2231 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Hoxd8P23463 Gm10482-202ENSMUST00000189825 2287 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Hoxd8P23463 5730455P16Rik-201ENSMUST00000103225 4554 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Hoxd8P23463 Hp1bp3-203ENSMUST00000105825 4618 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Hoxd8P23463 Trp63-203ENSMUST00000115304 2634 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd8P23463 Trak2-205ENSMUST00000174120 2636 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Hoxd8P23463 Brinp3-205ENSMUST00000166814 2760 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd8P23463 Ttc16-201ENSMUST00000066478 2979 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd8P23463 Gm38012-201ENSMUST00000193022 3029 ntBASIC8.67□□□□□ -1.02
Hoxd8P23463 Adgrf4-201ENSMUST00000024711 3060 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd8P23463 Setd7-201ENSMUST00000037141 7411 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd8P23463 Myo6-212ENSMUST00000184480 4139 ntTSL 5 BASIC8.67□□□□□ -1.02
Hoxd8P23463 Ryr1-202ENSMUST00000179893 15358 ntAPPRIS P2 TSL 5 BASIC8.67□□□□□ -1.02
Hoxd8P23463 Gm24284-201ENSMUST00000104240 142 ntBASIC8.67□□□□□ -1.02
Hoxd8P23463 Mir290a-201ENSMUST00000104627 83 ntBASIC8.67□□□□□ -1.02
Hoxd8P23463 Ezh1-202ENSMUST00000107284 4207 ntAPPRIS ALT1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd8P23463 Ctns-202ENSMUST00000108476 2723 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd8P23463 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Hoxd8P23463 Ccrl2-201ENSMUST00000111888 2459 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd8P23463 Xlr5b-202ENSMUST00000114518 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd8P23463 Hmgn2-ps1-201ENSMUST00000120716 279 ntBASIC8.67□□□□□ -1.02
Hoxd8P23463 Gm8084-201ENSMUST00000120807 752 ntBASIC8.67□□□□□ -1.02
Hoxd8P23463 Gm11404-201ENSMUST00000120872 494 ntBASIC8.67□□□□□ -1.02
Hoxd8P23463 Gm13936-201ENSMUST00000130416 715 ntTSL 3 BASIC8.67□□□□□ -1.02
Hoxd8P23463 Grip1-215ENSMUST00000148954 3293 ntAPPRIS ALT2 TSL 5 BASIC8.67□□□□□ -1.02
Hoxd8P23463 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd8P23463 Gm4491-201ENSMUST00000159455 1523 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd8P23463 Rnf214-209ENSMUST00000161203 3294 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd8P23463 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd8P23463 Olfr331-202ENSMUST00000170501 957 ntBASIC8.67□□□□□ -1.02
Hoxd8P23463 Mon2-203ENSMUST00000170935 5302 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd8P23463 Gm17198-201ENSMUST00000171792 1154 ntBASIC8.67□□□□□ -1.02
Hoxd8P23463 Gm12002-203ENSMUST00000174550 923 ntTSL 3 BASIC8.67□□□□□ -1.02
Hoxd8P23463 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
Hoxd8P23463 Gm10182-201ENSMUST00000178676 273 ntBASIC8.67□□□□□ -1.02
Hoxd8P23463 Xlr5a-204ENSMUST00000179600 1650 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
Hoxd8P23463 Gm5839-201ENSMUST00000182835 1007 ntBASIC8.67□□□□□ -1.02
Hoxd8P23463 Gm5147-201ENSMUST00000185999 794 ntBASIC8.67□□□□□ -1.02
Hoxd8P23463 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd8P23463 Gsdmc2-203ENSMUST00000188691 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd8P23463 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC8.67□□□□□ -1.02
Hoxd8P23463 Pinc-201ENSMUST00000190229 2170 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd8P23463 Gm7897-201ENSMUST00000193981 554 ntBASIC8.67□□□□□ -1.02
Hoxd8P23463 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC8.67□□□□□ -1.02
Hoxd8P23463 Gm8891-201ENSMUST00000198546 832 ntBASIC8.67□□□□□ -1.02
Hoxd8P23463 A230001M10Rik-203ENSMUST00000198712 1747 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd8P23463 Gm42861-201ENSMUST00000199596 634 ntBASIC8.67□□□□□ -1.02
Hoxd8P23463 Gm4962-201ENSMUST00000199640 2977 ntBASIC8.67□□□□□ -1.02
Hoxd8P23463 Gm43810-201ENSMUST00000201018 232 ntBASIC8.67□□□□□ -1.02
Hoxd8P23463 Gm4536-201ENSMUST00000209157 542 ntBASIC8.67□□□□□ -1.02
Hoxd8P23463 Ccl7-201ENSMUST00000021011 801 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hoxd8P23463 Gm3912-203ENSMUST00000211024 367 ntBASIC8.67□□□□□ -1.02
Hoxd8P23463 Gm45435-201ENSMUST00000211147 475 ntTSL 5 BASIC8.67□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms