Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 CT010480.3-201ENSMUST00000224712 259 ntBASIC6.05□□□□□ -1.44
Sdc1P18828 AC167019.2-201ENSMUST00000227335 845 ntBASIC6.05□□□□□ -1.44
Sdc1P18828 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Sdc1P18828 Cenpx-202ENSMUST00000055424 606 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sdc1P18828 Sh2d1a-201ENSMUST00000005839 883 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sdc1P18828 Rpl31-201ENSMUST00000086535 1049 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sdc1P18828 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sdc1P18828 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sdc1P18828 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sdc1P18828 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Sdc1P18828 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC6.05□□□□□ -1.44
Sdc1P18828 Gm19337-201ENSMUST00000218100 1584 ntBASIC6.05□□□□□ -1.44
Sdc1P18828 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sdc1P18828 Olfr675-203ENSMUST00000214318 3828 ntTSL 5 BASIC6.05□□□□□ -1.44
Sdc1P18828 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sdc1P18828 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sdc1P18828 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sdc1P18828 Gm6819-201ENSMUST00000185325 1891 ntBASIC6.05□□□□□ -1.44
Sdc1P18828 E430024I08Rik-202ENSMUST00000220632 1513 ntTSL 5 BASIC6.04□□□□□ -1.44
Sdc1P18828 D130007C19Rik-201ENSMUST00000067277 1505 ntBASIC6.04□□□□□ -1.44
Sdc1P18828 AC103672.2-201ENSMUST00000228146 1687 ntBASIC6.04□□□□□ -1.44
Sdc1P18828 AC163660.4-201ENSMUST00000224983 2171 ntBASIC6.04□□□□□ -1.44
Sdc1P18828 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
Sdc1P18828 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sdc1P18828 Dtwd1-202ENSMUST00000170908 1342 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sdc1P18828 Gm45887-201ENSMUST00000212672 2998 ntBASIC6.04□□□□□ -1.44
Sdc1P18828 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sdc1P18828 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sdc1P18828 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC6.04□□□□□ -1.44
Sdc1P18828 Gm43285-201ENSMUST00000196563 3592 ntBASIC6.04□□□□□ -1.44
Sdc1P18828 Tpbpa-201ENSMUST00000021885 1621 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sdc1P18828 Lum-201ENSMUST00000038160 2448 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sdc1P18828 Gm42577-201ENSMUST00000201367 3211 ntBASIC6.04□□□□□ -1.44
Sdc1P18828 Cpne3-201ENSMUST00000029885 5648 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sdc1P18828 Hmgn2-203ENSMUST00000102553 1265 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sdc1P18828 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
Sdc1P18828 Rpl12-ps1-201ENSMUST00000116168 498 ntBASIC6.04□□□□□ -1.44
Sdc1P18828 Gm14427-201ENSMUST00000117183 635 ntBASIC6.04□□□□□ -1.44
Sdc1P18828 Gm15422-201ENSMUST00000117453 541 ntBASIC6.04□□□□□ -1.44
Sdc1P18828 Gm13655-201ENSMUST00000119695 745 ntBASIC6.04□□□□□ -1.44
Sdc1P18828 Gm12687-201ENSMUST00000119752 706 ntBASIC6.04□□□□□ -1.44
Sdc1P18828 Gm11198-201ENSMUST00000119771 974 ntBASIC6.04□□□□□ -1.44
Sdc1P18828 Gm9097-201ENSMUST00000120514 880 ntBASIC6.04□□□□□ -1.44
Sdc1P18828 Gm13543-201ENSMUST00000121230 796 ntBASIC6.04□□□□□ -1.44
Sdc1P18828 Gm14212-201ENSMUST00000122023 826 ntBASIC6.04□□□□□ -1.44
Sdc1P18828 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sdc1P18828 Crem-209ENSMUST00000129435 1160 ntTSL 5 BASIC6.04□□□□□ -1.44
Sdc1P18828 Gm11186-201ENSMUST00000137096 1179 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sdc1P18828 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC6.04□□□□□ -1.44
Sdc1P18828 Gm23663-201ENSMUST00000158045 80 ntBASIC6.04□□□□□ -1.44
Sdc1P18828 Gm25767-201ENSMUST00000158572 124 ntBASIC6.04□□□□□ -1.44
Sdc1P18828 Gm23823-201ENSMUST00000158740 124 ntBASIC6.04□□□□□ -1.44
Sdc1P18828 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC6.04□□□□□ -1.44
Sdc1P18828 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC6.04□□□□□ -1.44
Sdc1P18828 Cldn34a-201ENSMUST00000164764 636 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Sdc1P18828 Klrc3-202ENSMUST00000170148 712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sdc1P18828 Gm27826-201ENSMUST00000175282 255 ntBASIC6.04□□□□□ -1.44
Sdc1P18828 1700034B16Rik-201ENSMUST00000180957 722 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sdc1P18828 2310005E17Rik-201ENSMUST00000186644 1187 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sdc1P18828 Gm5334-201ENSMUST00000187472 720 ntBASIC6.04□□□□□ -1.44
Sdc1P18828 Gm17796-201ENSMUST00000189015 1213 ntBASIC6.04□□□□□ -1.44
Sdc1P18828 Gm9723-201ENSMUST00000192100 457 ntBASIC6.04□□□□□ -1.44
Sdc1P18828 Gm37799-201ENSMUST00000194018 547 ntTSL 3 BASIC6.04□□□□□ -1.44
Sdc1P18828 Gm42628-201ENSMUST00000198498 764 ntBASIC6.04□□□□□ -1.44
Sdc1P18828 Gm7902-201ENSMUST00000198842 947 ntBASIC6.04□□□□□ -1.44
Sdc1P18828 Gm42489-201ENSMUST00000198964 669 ntBASIC6.04□□□□□ -1.44
Sdc1P18828 Gm19102-201ENSMUST00000201133 553 ntBASIC6.04□□□□□ -1.44
Sdc1P18828 Gm18058-201ENSMUST00000207385 492 ntBASIC6.04□□□□□ -1.44
Sdc1P18828 Olfr46-202ENSMUST00000211771 1190 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
Sdc1P18828 CAAA01125382.3-201ENSMUST00000215277 643 ntBASIC6.04□□□□□ -1.44
Sdc1P18828 CT009738.1-201ENSMUST00000219031 809 ntBASIC6.04□□□□□ -1.44
Sdc1P18828 AC132954.2-201ENSMUST00000222400 403 ntBASIC6.04□□□□□ -1.44
Sdc1P18828 AC159293.1-201ENSMUST00000222662 545 ntTSL 3 BASIC6.04□□□□□ -1.44
Sdc1P18828 AC157772.1-201ENSMUST00000226266 365 ntBASIC6.04□□□□□ -1.44
Sdc1P18828 AC105408.1-201ENSMUST00000227771 802 ntBASIC6.04□□□□□ -1.44
Sdc1P18828 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sdc1P18828 Gsta2-201ENSMUST00000034902 870 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sdc1P18828 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sdc1P18828 Olfr46-201ENSMUST00000072655 957 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
Sdc1P18828 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
Sdc1P18828 Olfr1418-201ENSMUST00000079875 1072 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Sdc1P18828 Cbx1-203ENSMUST00000093943 1251 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sdc1P18828 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sdc1P18828 Gm11282-201ENSMUST00000119018 1416 ntBASIC6.04□□□□□ -1.44
Sdc1P18828 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC6.04□□□□□ -1.44
Sdc1P18828 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC6.04□□□□□ -1.44
Sdc1P18828 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Sdc1P18828 Pcdh15-232ENSMUST00000177420 4878 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sdc1P18828 Nat8f4-201ENSMUST00000095757 3019 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sdc1P18828 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sdc1P18828 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sdc1P18828 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Sdc1P18828 Olfr122-204ENSMUST00000217119 2224 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Sdc1P18828 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sdc1P18828 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC6.03□□□□□ -1.44
Sdc1P18828 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sdc1P18828 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
Sdc1P18828 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Sdc1P18828 Gm44130-201ENSMUST00000205157 3004 ntBASIC6.03□□□□□ -1.44
Sdc1P18828 AC152922.2-201ENSMUST00000213353 3879 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms