Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 AC108846.4-201ENSMUST00000216783 341 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 Gm4739-201ENSMUST00000218296 633 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 Gm18591-201ENSMUST00000220568 763 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 Gm9305-201ENSMUST00000220962 599 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 Gm7986-201ENSMUST00000221336 551 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 AC129597.1-201ENSMUST00000223046 1234 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 Gm46342-201ENSMUST00000223411 602 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx1P18111 Klk1b11-201ENSMUST00000007156 863 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx1P18111 E030024N20Rik-201ENSMUST00000075293 494 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 Rpl21-ps7-201ENSMUST00000077420 483 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 Gm15448-203ENSMUST00000108620 1828 ntTSL 5 BASIC6.19□□□□□ -1.42
Cdx1P18111 Rgs9-203ENSMUST00000106704 3464 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx1P18111 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Cdx1P18111 Gm38244-201ENSMUST00000191737 2586 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 Dock9-208ENSMUST00000212376 8107 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Cdx1P18111 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC6.19□□□□□ -1.42
Cdx1P18111 Prkacb-203ENSMUST00000106137 4061 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx1P18111 Gm43363-201ENSMUST00000201590 2647 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx1P18111 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx1P18111 Adamts12-201ENSMUST00000061318 8579 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx1P18111 Hrh4-201ENSMUST00000041676 1537 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx1P18111 Gm44620-201ENSMUST00000209183 2887 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 Mapk9-203ENSMUST00000102778 4447 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx1P18111 AC158686.1-201ENSMUST00000218068 2332 ntBASIC6.19□□□□□ -1.42
Cdx1P18111 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC6.18□□□□□ -1.42
Cdx1P18111 Gm45817-201ENSMUST00000212738 1757 ntBASIC6.18□□□□□ -1.42
Cdx1P18111 Gm43330-201ENSMUST00000199706 2153 ntBASIC6.18□□□□□ -1.42
Cdx1P18111 Olfr152-203ENSMUST00000215394 2172 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
Cdx1P18111 Mapre1-201ENSMUST00000028981 7336 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx1P18111 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC6.18□□□□□ -1.42
Cdx1P18111 Gm37262-201ENSMUST00000192816 1818 ntBASIC6.18□□□□□ -1.42
Cdx1P18111 Krt39-202ENSMUST00000107445 1633 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Cdx1P18111 Gm37067-201ENSMUST00000195730 1628 ntBASIC6.18□□□□□ -1.42
Cdx1P18111 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Cdx1P18111 AC156790.4-202ENSMUST00000228838 1418 ntBASIC6.18□□□□□ -1.42
Cdx1P18111 D3Ertd751e-203ENSMUST00000108065 3452 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx1P18111 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
Cdx1P18111 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
Cdx1P18111 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Cdx1P18111 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx1P18111 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx1P18111 Olfr295-202ENSMUST00000215365 6013 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Cdx1P18111 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC6.18□□□□□ -1.42
Cdx1P18111 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC6.18□□□□□ -1.42
Cdx1P18111 AC079245.1-201ENSMUST00000215680 1454 ntBASIC6.18□□□□□ -1.42
Cdx1P18111 Cks1brt-201ENSMUST00000076896 2301 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Cdx1P18111 Gm22760-201ENSMUST00000102277 93 ntBASIC6.18□□□□□ -1.42
Cdx1P18111 Dnhd1-201ENSMUST00000106776 1146 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx1P18111 Gm14561-201ENSMUST00000117376 798 ntBASIC6.18□□□□□ -1.42
Cdx1P18111 Gm13879-201ENSMUST00000118308 242 ntBASIC6.18□□□□□ -1.42
Cdx1P18111 Gm12034-201ENSMUST00000119032 399 ntBASIC6.18□□□□□ -1.42
Cdx1P18111 Gm12170-201ENSMUST00000119281 300 ntBASIC6.18□□□□□ -1.42
Cdx1P18111 Gm14048-201ENSMUST00000121864 1268 ntBASIC6.18□□□□□ -1.42
Cdx1P18111 Gm12780-201ENSMUST00000122458 645 ntBASIC6.18□□□□□ -1.42
Cdx1P18111 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx1P18111 Rpl36-ps2-201ENSMUST00000136893 311 ntBASIC6.18□□□□□ -1.42
Cdx1P18111 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx1P18111 Defa-ps3-201ENSMUST00000142705 282 ntBASIC6.18□□□□□ -1.42
Cdx1P18111 E130215H24Rik-201ENSMUST00000145525 939 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx1P18111 Gm13068-202ENSMUST00000146250 876 ntTSL 3 BASIC6.18□□□□□ -1.42
Cdx1P18111 Gm11468-201ENSMUST00000152987 383 ntTSL 2 BASIC6.18□□□□□ -1.42
Cdx1P18111 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx1P18111 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
Cdx1P18111 Gm26977-201ENSMUST00000183151 996 ntBASIC6.18□□□□□ -1.42
Cdx1P18111 Ms4a3-202ENSMUST00000186023 966 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx1P18111 Gm5575-201ENSMUST00000190879 398 ntBASIC6.18□□□□□ -1.42
Cdx1P18111 Gm28492-201ENSMUST00000190899 1019 ntBASIC6.18□□□□□ -1.42
Cdx1P18111 Gm42538-201ENSMUST00000196233 566 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx1P18111 Gm42581-201ENSMUST00000201774 966 ntBASIC6.18□□□□□ -1.42
Cdx1P18111 BC060293-201ENSMUST00000207005 1104 ntBASIC6.18□□□□□ -1.42
Cdx1P18111 Gm45834-201ENSMUST00000212445 454 ntBASIC6.18□□□□□ -1.42
Cdx1P18111 Olfr863-ps1-201ENSMUST00000213073 929 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Cdx1P18111 Gm26797-203ENSMUST00000216452 706 ntTSL 5 BASIC6.18□□□□□ -1.42
Cdx1P18111 AL645704.1-201ENSMUST00000221642 604 ntBASIC6.18□□□□□ -1.42
Cdx1P18111 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC6.18□□□□□ -1.42
Cdx1P18111 AC163038.3-201ENSMUST00000223945 558 ntBASIC6.18□□□□□ -1.42
Cdx1P18111 AC132468.1-201ENSMUST00000224706 499 ntBASIC6.18□□□□□ -1.42
Cdx1P18111 Tssk4-206ENSMUST00000228041 1217 ntBASIC6.18□□□□□ -1.42
Cdx1P18111 AC166822.2-201ENSMUST00000228746 275 ntBASIC6.18□□□□□ -1.42
Cdx1P18111 Cxcl13-201ENSMUST00000023840 1150 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx1P18111 Rhox4e-201ENSMUST00000089075 978 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx1P18111 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx1P18111 Olfr1224-ps1-201ENSMUST00000099792 936 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Cdx1P18111 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx1P18111 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
Cdx1P18111 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC6.18□□□□□ -1.42
Cdx1P18111 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx1P18111 Alg6-201ENSMUST00000097961 3079 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx1P18111 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC6.18□□□□□ -1.42
Cdx1P18111 Gm43942-201ENSMUST00000204522 2859 ntBASIC6.18□□□□□ -1.42
Cdx1P18111 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx1P18111 Eapp-206ENSMUST00000163433 2658 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx1P18111 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx1P18111 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Cdx1P18111 Serpina1f-201ENSMUST00000021490 1569 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx1P18111 CU024890.1-201ENSMUST00000221361 2019 ntBASIC6.18□□□□□ -1.42
Cdx1P18111 Cep19-201ENSMUST00000042869 1567 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Cdx1P18111 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 106 ms