Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 BB014433-203ENSMUST00000179941 1543 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Gm14032-201ENSMUST00000117686 1026 ntBASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Gm15320-201ENSMUST00000118085 364 ntBASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Gm15507-203ENSMUST00000140958 658 ntTSL 3 BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 2310026L22Rik-201ENSMUST00000146658 400 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Gm26410-201ENSMUST00000157670 261 ntBASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Gm24901-201ENSMUST00000158125 110 ntBASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Gm25718-201ENSMUST00000158632 118 ntBASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Sfta2-202ENSMUST00000174521 649 ntTSL 3 BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Tcstv3-201ENSMUST00000178349 510 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Rnu3b1-201ENSMUST00000183812 216 ntBASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Rnu3b4-201ENSMUST00000184171 215 ntBASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Rnu3b2-201ENSMUST00000185073 215 ntBASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Rnu3b2-202ENSMUST00000196353 216 ntBASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Rnu3b3-202ENSMUST00000198628 215 ntBASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Rnu3b4-202ENSMUST00000199460 216 ntBASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Rnu3b1-202ENSMUST00000200547 215 ntBASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Gm45063-201ENSMUST00000203726 472 ntBASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Gm44971-201ENSMUST00000206192 337 ntBASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 4933400L20Rik-202ENSMUST00000211119 870 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Tssk4-203ENSMUST00000226497 1235 ntBASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Olfr648-201ENSMUST00000052659 951 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 H2al3-201ENSMUST00000057113 553 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Gm5436-201ENSMUST00000058103 643 ntBASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Snora65-201ENSMUST00000083190 130 ntBASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Rnu3b3-201ENSMUST00000093738 216 ntBASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Gm16429-202ENSMUST00000201400 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Gm7971-201ENSMUST00000086950 1848 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Pcdhb20-201ENSMUST00000052179 3559 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Zdhhc21-201ENSMUST00000030110 8763 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Pcdhb19-201ENSMUST00000059571 7138 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Olfml1-201ENSMUST00000120990 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Itga10-201ENSMUST00000029744 5044 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Slc16a4-202ENSMUST00000106723 1781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Lpin2-204ENSMUST00000129635 5640 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Cpsf1-201ENSMUST00000071898 4515 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Nkx1-1G3UXB3 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 3110009F21Rik-201ENSMUST00000223217 1625 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 Gm16287-201ENSMUST00000097827 2324 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 Gm23127-201ENSMUST00000104261 130 ntBASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 Fam166b-202ENSMUST00000107928 762 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 Zfp467-207ENSMUST00000114563 463 ntTSL 5 BASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 Gm14654-201ENSMUST00000118620 447 ntBASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 Rps14-203ENSMUST00000122279 667 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 4933406J10Rik-201ENSMUST00000144828 963 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 Gm17234-201ENSMUST00000172128 392 ntTSL 3 BASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 Mir5100-201ENSMUST00000174993 64 ntBASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 Pantr1-203ENSMUST00000176154 514 ntTSL 5 BASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 Btg1-ps1-202ENSMUST00000184432 825 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 Tshb-205ENSMUST00000197322 476 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 Gm44786-201ENSMUST00000208165 1008 ntTSL 5 BASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 Lnp1-201ENSMUST00000210579 671 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 AC124577.1-201ENSMUST00000214044 487 ntBASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 AC153141.1-201ENSMUST00000218636 501 ntBASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 Gm18503-201ENSMUST00000220340 728 ntBASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 Eif1-ps2-201ENSMUST00000221990 339 ntBASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 Pvalb-201ENSMUST00000005860 977 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 Gm6215-201ENSMUST00000119297 1386 ntBASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 Gm6207-201ENSMUST00000120075 1386 ntBASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 Gm6228-201ENSMUST00000178856 1386 ntBASIC10.84□□□□□ -0.67
Nkx1-1G3UXB3 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms