Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm29362-201ENSMUST00000187898 133 ntBASIC6.75□□□□□ -1.33
Scrt1Q99M85 Gm17867-201ENSMUST00000188981 391 ntBASIC6.75□□□□□ -1.33
Scrt1Q99M85 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC6.75□□□□□ -1.33
Scrt1Q99M85 Gm19254-201ENSMUST00000204828 294 ntBASIC6.75□□□□□ -1.33
Scrt1Q99M85 Gm44996-201ENSMUST00000208787 2980 ntBASIC6.75□□□□□ -1.33
Scrt1Q99M85 AC122539.1-201ENSMUST00000219925 329 ntBASIC6.75□□□□□ -1.33
Scrt1Q99M85 Gm31711-201ENSMUST00000220687 196 ntBASIC6.75□□□□□ -1.33
Scrt1Q99M85 Gm30239-201ENSMUST00000220776 780 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Scrt1Q99M85 AC151982.1-201ENSMUST00000223546 464 ntBASIC6.75□□□□□ -1.33
Scrt1Q99M85 AC154487.1-201ENSMUST00000224649 226 ntBASIC6.75□□□□□ -1.33
Scrt1Q99M85 Ppbp-201ENSMUST00000031319 1083 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Scrt1Q99M85 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Scrt1Q99M85 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Scrt1Q99M85 Olfr120-201ENSMUST00000077498 993 ntBASIC6.75□□□□□ -1.33
Scrt1Q99M85 Anapc15-ps-201ENSMUST00000099328 426 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Scrt1Q99M85 Sec16b-203ENSMUST00000111700 4369 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Scrt1Q99M85 Tmc2-202ENSMUST00000166774 2667 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
Scrt1Q99M85 Asb17-201ENSMUST00000044089 2553 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Scrt1Q99M85 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC6.75□□□□□ -1.33
Scrt1Q99M85 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC6.75□□□□□ -1.33
Scrt1Q99M85 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC6.75□□□□□ -1.33
Scrt1Q99M85 Rgs9-203ENSMUST00000106704 3464 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Scrt1Q99M85 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC6.75□□□□□ -1.33
Scrt1Q99M85 Gm28955-201ENSMUST00000188167 2166 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Scrt1Q99M85 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Scrt1Q99M85 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Scrt1Q99M85 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC6.75□□□□□ -1.33
Scrt1Q99M85 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC6.75□□□□□ -1.33
Scrt1Q99M85 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC6.75□□□□□ -1.33
Scrt1Q99M85 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Scrt1Q99M85 Ankef1-210ENSMUST00000180246 2726 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Scrt1Q99M85 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Scrt1Q99M85 Gm13106-201ENSMUST00000119045 1443 ntBASIC6.75□□□□□ -1.33
Scrt1Q99M85 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Scrt1Q99M85 Olfr221-204ENSMUST00000216188 2871 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Scrt1Q99M85 Olfr1259-202ENSMUST00000214846 4325 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Dip2b-201ENSMUST00000023768 4323 ntTSL 5 BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Vmn2r92-201ENSMUST00000169686 2583 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Vmn2r40-201ENSMUST00000171942 3623 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Znfx1-202ENSMUST00000067584 4147 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Gm44752-201ENSMUST00000207140 3305 ntBASIC6.74□□□□□ -1.33
Scrt1Q99M85 Gm44652-201ENSMUST00000208648 2854 ntBASIC6.74□□□□□ -1.33
Scrt1Q99M85 Olfr1432-202ENSMUST00000207710 2068 ntAPPRIS P5 TSL 5 BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Gm13224-201ENSMUST00000119586 94 ntBASIC6.74□□□□□ -1.33
Scrt1Q99M85 Lrrc18-203ENSMUST00000120866 1231 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Gm13726-201ENSMUST00000121278 794 ntBASIC6.74□□□□□ -1.33
Scrt1Q99M85 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Obox4-ps31-201ENSMUST00000177210 1137 ntBASIC6.74□□□□□ -1.33
Scrt1Q99M85 Mir6340-201ENSMUST00000183857 119 ntBASIC6.74□□□□□ -1.33
Scrt1Q99M85 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Gm37724-201ENSMUST00000195240 1221 ntBASIC6.74□□□□□ -1.33
Scrt1Q99M85 Gm42767-201ENSMUST00000198583 632 ntBASIC6.74□□□□□ -1.33
Scrt1Q99M85 1700028E10Rik-206ENSMUST00000202216 557 ntTSL 3 BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Gm44287-201ENSMUST00000203069 290 ntTSL 3 BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Gm43906-201ENSMUST00000203194 906 ntBASIC6.74□□□□□ -1.33
Scrt1Q99M85 Gm44785-202ENSMUST00000208294 932 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Scrt1Q99M85 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Scrt1Q99M85 AC153968.1-201ENSMUST00000215584 334 ntBASIC6.74□□□□□ -1.33
Scrt1Q99M85 Gm6667-201ENSMUST00000217169 564 ntBASIC6.74□□□□□ -1.33
Scrt1Q99M85 Gm46124-202ENSMUST00000217260 860 ntTSL 5 BASIC6.74□□□□□ -1.33
Scrt1Q99M85 AC174678.3-201ENSMUST00000227568 362 ntBASIC6.74□□□□□ -1.33
Scrt1Q99M85 Olfr1509-201ENSMUST00000045066 1010 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Mir135b-201ENSMUST00000083501 97 ntBASIC6.74□□□□□ -1.33
Scrt1Q99M85 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Vmn1r188-201ENSMUST00000091739 927 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Mir455-201ENSMUST00000093594 82 ntBASIC6.74□□□□□ -1.33
Scrt1Q99M85 Myh10-202ENSMUST00000092984 7759 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Slc12a3-205ENSMUST00000212134 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Prom1-202ENSMUST00000074113 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Scrt1Q99M85 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Ift122-202ENSMUST00000112923 3765 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Olfr523-204ENSMUST00000214272 3780 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Gm40309-201ENSMUST00000202699 1752 ntBASIC6.74□□□□□ -1.33
Scrt1Q99M85 Pum1-204ENSMUST00000105991 4614 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Gm21977-201ENSMUST00000163725 1402 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Gm8068-201ENSMUST00000167440 1402 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Ppp1r9a-204ENSMUST00000168998 2966 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Gm33280-201ENSMUST00000193983 4340 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Rassf6-206ENSMUST00000202784 1919 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Scrt1Q99M85 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms