Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm4259-201ENSMUST00000206489 758 ntBASIC8.51□□□□□ -1.05
Ccdc38Q8CDN8 Gm9249-201ENSMUST00000221420 578 ntBASIC8.51□□□□□ -1.05
Ccdc38Q8CDN8 AC163638.1-201ENSMUST00000224818 392 ntBASIC8.51□□□□□ -1.05
Ccdc38Q8CDN8 AC116487.1-201ENSMUST00000227033 339 ntBASIC8.51□□□□□ -1.05
Ccdc38Q8CDN8 CT009550.2-201ENSMUST00000228851 399 ntBASIC8.51□□□□□ -1.05
Ccdc38Q8CDN8 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Ccdc38Q8CDN8 Ifna4-201ENSMUST00000094973 561 ntAPPRIS P1 BASIC8.51□□□□□ -1.05
Ccdc38Q8CDN8 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ccdc38Q8CDN8 Gm42514-201ENSMUST00000196636 1832 ntBASIC8.51□□□□□ -1.05
Ccdc38Q8CDN8 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC8.51□□□□□ -1.05
Ccdc38Q8CDN8 Gm45634-201ENSMUST00000209736 1990 ntBASIC8.51□□□□□ -1.05
Ccdc38Q8CDN8 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC8.51□□□□□ -1.05
Ccdc38Q8CDN8 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ccdc38Q8CDN8 Prokr2-201ENSMUST00000049997 4486 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ccdc38Q8CDN8 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ccdc38Q8CDN8 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ccdc38Q8CDN8 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Ccdc38Q8CDN8 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ccdc38Q8CDN8 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
Ccdc38Q8CDN8 AC139350.2-201ENSMUST00000226508 2331 ntBASIC8.51□□□□□ -1.05
Ccdc38Q8CDN8 Slco6b1-201ENSMUST00000167383 2492 ntTSL 2 BASIC8.51□□□□□ -1.05
Ccdc38Q8CDN8 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Trim12a-202ENSMUST00000106837 1389 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Cnot2-203ENSMUST00000105267 2800 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Mybbp1a-201ENSMUST00000045633 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Mecp2-202ENSMUST00000100750 10538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Ighv1-67-201ENSMUST00000103538 294 ntBASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Gm12838-201ENSMUST00000116278 325 ntBASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Gm15062-201ENSMUST00000120567 367 ntBASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Gm14826-201ENSMUST00000121284 901 ntBASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Gm11933-201ENSMUST00000121550 375 ntBASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Mgst1-207ENSMUST00000140932 742 ntTSL 3 BASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Mir1968-201ENSMUST00000157429 68 ntBASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Gm26351-201ENSMUST00000157532 232 ntBASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Zfp964-201ENSMUST00000169125 1416 ntTSL 3 BASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Olfr457-201ENSMUST00000170504 1039 ntAPPRIS P1 BASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Gm26269-201ENSMUST00000180144 126 ntBASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Gm9423-201ENSMUST00000183173 997 ntBASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 4930535O05Rik-201ENSMUST00000184406 419 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 1700012I11Rik-201ENSMUST00000187233 1039 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Gm42959-201ENSMUST00000202184 212 ntBASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Gm19172-201ENSMUST00000203170 1246 ntBASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Gm19065-201ENSMUST00000203269 788 ntTSL 5 BASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Gm39059-201ENSMUST00000209160 424 ntTSL 5 BASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 4930483O08Rik-201ENSMUST00000209850 1030 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Gm5535-206ENSMUST00000210067 679 ntTSL 5 BASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Olfr131-204ENSMUST00000216523 1714 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Gm34662-202ENSMUST00000220753 603 ntTSL 5 BASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 AC116476.1-201ENSMUST00000226274 2318 ntBASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 AC124715.2-201ENSMUST00000226762 617 ntBASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 AC154760.1-201ENSMUST00000227218 673 ntBASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Gm18313-201ENSMUST00000221036 1784 ntBASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Atp2b4-207ENSMUST00000165602 8101 ntAPPRIS P3 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Pnlip-201ENSMUST00000057270 1485 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Gm32486-201ENSMUST00000209810 3816 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Gm13301-201ENSMUST00000121728 2446 ntBASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 AC156163.1-201ENSMUST00000215598 3369 ntBASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
Ccdc38Q8CDN8 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Lgals9-202ENSMUST00000108268 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Dpep2-202ENSMUST00000117555 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Pmfbp1-201ENSMUST00000034162 3396 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Gimd1-201ENSMUST00000163241 1413 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Ighv1-59-201ENSMUST00000103530 348 ntAPPRIS ALT2 BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Gm41-201ENSMUST00000116183 1023 ntBASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Gm26469-201ENSMUST00000116765 121 ntBASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Gm12967-201ENSMUST00000122147 289 ntBASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Gm13828-201ENSMUST00000122278 363 ntBASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 1700021N21Rik-201ENSMUST00000131110 904 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Rps12-ps9-201ENSMUST00000139165 399 ntBASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Gm13012-202ENSMUST00000155349 849 ntTSL 2 BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 1700025N21Rik-201ENSMUST00000160997 686 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC8.49□□□□□ -1.05
Ccdc38Q8CDN8 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC8.49□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms