Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm29063-201ENSMUST00000190236 2166 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Antxrl-201ENSMUST00000058725 2532 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm37364-201ENSMUST00000192533 3920 ntBASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Cts3-201ENSMUST00000054702 1442 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Serpina1d-201ENSMUST00000078869 1394 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm16409-201ENSMUST00000100510 747 ntBASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm22271-201ENSMUST00000104035 128 ntBASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Rps6-ps4-201ENSMUST00000118499 750 ntBASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm13742-201ENSMUST00000118805 457 ntBASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm9143-201ENSMUST00000120745 745 ntBASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm8172-201ENSMUST00000120762 750 ntBASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm13487-201ENSMUST00000122240 864 ntBASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Tmsb10-204ENSMUST00000144337 433 ntTSL 2 BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Atp6v1c2-207ENSMUST00000156727 1279 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm24899-201ENSMUST00000158892 73 ntBASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm24369-201ENSMUST00000175387 96 ntBASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 4930535O05Rik-201ENSMUST00000184406 419 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm29000-202ENSMUST00000185562 571 ntTSL 5 BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm29617-203ENSMUST00000186558 1033 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm28677-203ENSMUST00000187144 1134 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm28749-204ENSMUST00000187827 571 ntTSL 5 BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm29178-207ENSMUST00000188496 1013 ntTSL 5 BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm28844-206ENSMUST00000189297 815 ntTSL 5 BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm28193-201ENSMUST00000189863 615 ntBASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm17970-201ENSMUST00000192199 685 ntBASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm37247-201ENSMUST00000192549 730 ntBASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm17835-201ENSMUST00000196870 499 ntBASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm42431-201ENSMUST00000196880 323 ntBASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm43013-201ENSMUST00000198216 247 ntBASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm42959-201ENSMUST00000202184 212 ntBASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Rps6-ps2-201ENSMUST00000079841 747 ntBASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm24696-201ENSMUST00000083878 134 ntBASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm3383-201ENSMUST00000096171 748 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm28649-201ENSMUST00000189153 1581 ntBASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm28979-201ENSMUST00000190949 1540 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm38302-201ENSMUST00000191676 2076 ntBASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Heatr5a-201ENSMUST00000040583 7763 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Serpina3a-203ENSMUST00000185595 1720 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 R3hdm2-202ENSMUST00000077046 4029 ntAPPRIS P2 TSL 5 BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Gm16427-201ENSMUST00000179091 1449 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Dnajc8-202ENSMUST00000094657 1401 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Zfp963-201ENSMUST00000130458 2291 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Ccdc87Q8CDL9 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Wac-202ENSMUST00000092112 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Olfr666-202ENSMUST00000214757 1949 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 AC107453.1-201ENSMUST00000227490 3268 ntBASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Zfp809-205ENSMUST00000215618 1313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Zim1-202ENSMUST00000122432 3060 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Gm12844-201ENSMUST00000119463 582 ntBASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Gm11901-201ENSMUST00000120412 437 ntBASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Gm14328-201ENSMUST00000122178 408 ntBASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Gm25320-201ENSMUST00000122551 324 ntBASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Gm12648-201ENSMUST00000126270 656 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Gm11482-201ENSMUST00000147067 719 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Gm26046-201ENSMUST00000157312 166 ntBASIC8.11□□□□□ -1.11
Ccdc87Q8CDL9 Gm25721-201ENSMUST00000157496 171 ntBASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms