Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Gm12789-202ENSMUST00000106915 495 ntAPPRIS P1 TSL 3 BASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Rps12-ps7-201ENSMUST00000117169 385 ntBASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Gm13900-201ENSMUST00000119402 498 ntBASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Gm15538-201ENSMUST00000121410 313 ntBASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Gm15624-202ENSMUST00000154953 713 ntTSL 2 BASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Gm16138-201ENSMUST00000159341 821 ntBASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Mir8094-201ENSMUST00000183361 117 ntBASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Mir6971-201ENSMUST00000183497 63 ntBASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Gm27156-201ENSMUST00000184589 754 ntBASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Gm7412-201ENSMUST00000191692 605 ntBASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Gm42782-201ENSMUST00000197286 522 ntBASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 4930401C15Rik-201ENSMUST00000218300 865 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 AC124489.3-201ENSMUST00000224037 278 ntBASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 AC108947.1-201ENSMUST00000224274 1000 ntBASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 AC173482.3-201ENSMUST00000225492 1212 ntBASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Abhd4-202ENSMUST00000180359 2508 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Sf3b1-201ENSMUST00000027127 6195 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Dlk1-206ENSMUST00000109846 4106 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Cpsf6-208ENSMUST00000177145 3819 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Zik1-201ENSMUST00000032551 4199 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Sf3b2Q3UJB0 Cwc22-204ENSMUST00000111821 3388 ntAPPRIS P3 TSL 5 BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Styk1-201ENSMUST00000049150 3380 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Aasdh-201ENSMUST00000069709 3381 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Gm45017-201ENSMUST00000206842 1777 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Lilra5-201ENSMUST00000117550 2109 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Ccnb1-202ENSMUST00000091295 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Cwc22-201ENSMUST00000065889 3471 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 CT009723.1-201ENSMUST00000215057 1803 ntTSL 5 BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 2010310C07Rik-201ENSMUST00000187172 2226 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Gm37649-201ENSMUST00000192079 2232 ntBASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Synpo2-207ENSMUST00000198584 9203 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Tcf24-201ENSMUST00000097824 2639 ntBASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Gm28370-201ENSMUST00000185303 3375 ntTSL 5 BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 1700034I23Rik-201ENSMUST00000099123 2348 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Lin7a-202ENSMUST00000105280 1634 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Ciao1-201ENSMUST00000003759 3075 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Sec23ip-201ENSMUST00000042942 4505 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Gm22370-201ENSMUST00000102422 83 ntBASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Gm22374-201ENSMUST00000104583 132 ntBASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Gm13430-201ENSMUST00000121366 288 ntBASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Gm4660-201ENSMUST00000131499 403 ntBASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Gm18808-201ENSMUST00000173316 462 ntBASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Ociad1-204ENSMUST00000200935 1139 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Gm44571-201ENSMUST00000208092 533 ntBASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Gm38574-201ENSMUST00000211855 640 ntBASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Gm3800-201ENSMUST00000221086 554 ntBASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Gm29486-201ENSMUST00000088648 372 ntBASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Tecta-201ENSMUST00000042190 7338 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Mrps17-203ENSMUST00000119576 5061 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 4930402H05Rik-201ENSMUST00000203115 2829 ntBASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Ipcef1-201ENSMUST00000078070 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Slc8a1-202ENSMUST00000163123 2877 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Tmod3-201ENSMUST00000072232 3667 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Slc7a2-202ENSMUST00000098816 3677 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Ldb2-207ENSMUST00000199534 2541 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 C78197-201ENSMUST00000152781 3417 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Ugt3a1-201ENSMUST00000022861 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Gm18957-201ENSMUST00000197623 1813 ntBASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Psmd10-201ENSMUST00000033805 1430 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Atp2a1-201ENSMUST00000032974 3477 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Gm11868-201ENSMUST00000121594 1478 ntBASIC9.98□□□□□ -0.81
Sf3b2Q3UJB0 Ubr5-204ENSMUST00000226414 8397 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Sf3b2Q3UJB0 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Sf3b2Q3UJB0 Mef2a-208ENSMUST00000156690 5538 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Sf3b2Q3UJB0 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sf3b2Q3UJB0 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
Sf3b2Q3UJB0 Npy2r-204ENSMUST00000182831 1689 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sf3b2Q3UJB0 Cd22-202ENSMUST00000108125 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sf3b2Q3UJB0 Prps2-201ENSMUST00000026839 3699 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sf3b2Q3UJB0 4930453H23Rik-201ENSMUST00000125569 1719 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Sf3b2Q3UJB0 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Sf3b2Q3UJB0 Gm11649-201ENSMUST00000118214 375 ntBASIC9.97□□□□□ -0.81
Sf3b2Q3UJB0 Gm8662-201ENSMUST00000118644 574 ntBASIC9.97□□□□□ -0.81
Sf3b2Q3UJB0 Gm6654-201ENSMUST00000118950 348 ntBASIC9.97□□□□□ -0.81
Sf3b2Q3UJB0 Gm7494-201ENSMUST00000121248 441 ntBASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms