Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Sox1P53783 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC8.31□□□□□ -1.08
Sox1P53783 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC8.31□□□□□ -1.08
Sox1P53783 Gm15600-201ENSMUST00000153522 856 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Sox1P53783 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Sox1P53783 Gm23773-201ENSMUST00000158985 296 ntBASIC8.31□□□□□ -1.08
Sox1P53783 Gm18779-201ENSMUST00000173444 577 ntBASIC8.31□□□□□ -1.08
Sox1P53783 Gm20500-201ENSMUST00000174621 321 ntTSL 3 BASIC8.31□□□□□ -1.08
Sox1P53783 Vmn1r-ps29-201ENSMUST00000174862 785 ntBASIC8.31□□□□□ -1.08
Sox1P53783 Gm2539-203ENSMUST00000181352 746 ntBASIC8.31□□□□□ -1.08
Sox1P53783 Gm29240-201ENSMUST00000187248 286 ntBASIC8.31□□□□□ -1.08
Sox1P53783 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Sox1P53783 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC8.31□□□□□ -1.08
Sox1P53783 Gm10472-201ENSMUST00000193014 2102 ntBASIC8.31□□□□□ -1.08
Sox1P53783 Gm18529-201ENSMUST00000193025 1257 ntBASIC8.31□□□□□ -1.08
Sox1P53783 Gm37439-201ENSMUST00000193150 856 ntBASIC8.31□□□□□ -1.08
Sox1P53783 Gm412-201ENSMUST00000193360 948 ntBASIC8.31□□□□□ -1.08
Sox1P53783 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC8.31□□□□□ -1.08
Sox1P53783 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Sox1P53783 Gm43382-201ENSMUST00000198954 838 ntBASIC8.31□□□□□ -1.08
Sox1P53783 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC8.31□□□□□ -1.08
Sox1P53783 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Sox1P53783 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Sox1P53783 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC8.31□□□□□ -1.08
Sox1P53783 Gm43926-201ENSMUST00000203978 430 ntBASIC8.31□□□□□ -1.08
Sox1P53783 Gm45198-201ENSMUST00000206796 591 ntBASIC8.31□□□□□ -1.08
Sox1P53783 Gm4585-201ENSMUST00000207218 452 ntBASIC8.31□□□□□ -1.08
Sox1P53783 Gm44865-201ENSMUST00000207240 531 ntBASIC8.31□□□□□ -1.08
Sox1P53783 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Sox1P53783 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC8.31□□□□□ -1.08
Sox1P53783 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Sox1P53783 AC154747.4-201ENSMUST00000224802 903 ntBASIC8.31□□□□□ -1.08
Sox1P53783 Iapp-201ENSMUST00000041993 839 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Sox1P53783 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Sox1P53783 Olfr357-201ENSMUST00000069578 1092 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Sox1P53783 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Sox1P53783 Cox11-202ENSMUST00000099960 773 ntAPPRIS ALT2 TSL 2 BASIC8.31□□□□□ -1.08
Sox1P53783 Lrba-206ENSMUST00000195524 3322 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Sox1P53783 Brd8-204ENSMUST00000115766 4258 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Sox1P53783 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Sox1P53783 Ttc41-205ENSMUST00000219108 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Sox1P53783 Gm7690-201ENSMUST00000190885 1399 ntBASIC8.31□□□□□ -1.08
Sox1P53783 Epn2-213ENSMUST00000179936 4452 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Sox1P53783 Supt7l-201ENSMUST00000065388 2693 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Sox1P53783 Prn-202ENSMUST00000136783 3370 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
Sox1P53783 4933427E13Rik-202ENSMUST00000125234 1493 ntTSL 2 BASIC8.31□□□□□ -1.08
Sox1P53783 Def8-202ENSMUST00000065534 3127 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Sox1P53783 Kng2-202ENSMUST00000100046 2294 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Sox1P53783 Fto-203ENSMUST00000128081 4707 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Sox1P53783 Nckap1l-201ENSMUST00000047405 4717 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Sox1P53783 Elovl2-202ENSMUST00000117096 3797 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Sox1P53783 9330121K16Rik-201ENSMUST00000211464 3886 ntBASIC8.3□□□□□ -1.08
Sox1P53783 Aldh2-201ENSMUST00000031411 3867 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sox1P53783 Nek11-201ENSMUST00000038648 3173 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sox1P53783 Srcap-207ENSMUST00000187040 10654 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
Sox1P53783 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC8.3□□□□□ -1.08
Sox1P53783 Arhgap24-201ENSMUST00000070000 3632 ntTSL 5 BASIC8.3□□□□□ -1.08
Sox1P53783 Olfr259-203ENSMUST00000215828 4095 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Sox1P53783 Polr3k-201ENSMUST00000039551 2948 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sox1P53783 Phf19-201ENSMUST00000028232 3741 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sox1P53783 Il1rl1-202ENSMUST00000097772 5302 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sox1P53783 Adgrb3-207ENSMUST00000151309 5448 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sox1P53783 Gm5535-208ENSMUST00000210482 1403 ntTSL 5 BASIC8.3□□□□□ -1.08
Sox1P53783 Olfr169-202ENSMUST00000215040 2316 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Sox1P53783 Kcna2-201ENSMUST00000038695 11582 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sox1P53783 AL662807.2-201ENSMUST00000224024 3335 ntBASIC8.3□□□□□ -1.08
Sox1P53783 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC8.3□□□□□ -1.08
Sox1P53783 CT025642.3-201ENSMUST00000225503 4086 ntBASIC8.3□□□□□ -1.08
Sox1P53783 Acbd5-202ENSMUST00000114523 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sox1P53783 Naca-202ENSMUST00000092048 6745 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Sox1P53783 Hip1-201ENSMUST00000060311 7835 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Sox1P53783 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Sox1P53783 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Sox1P53783 Gm14248-201ENSMUST00000117790 544 ntBASIC8.3□□□□□ -1.08
Sox1P53783 Gm11858-201ENSMUST00000117935 838 ntBASIC8.3□□□□□ -1.08
Sox1P53783 Gm14836-201ENSMUST00000118567 471 ntBASIC8.3□□□□□ -1.08
Sox1P53783 Gm15227-201ENSMUST00000121844 399 ntBASIC8.3□□□□□ -1.08
Sox1P53783 Gm5644-201ENSMUST00000122039 465 ntBASIC8.3□□□□□ -1.08
Sox1P53783 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC8.3□□□□□ -1.08
Sox1P53783 Gm12925-201ENSMUST00000130791 678 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Sox1P53783 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC8.3□□□□□ -1.08
Sox1P53783 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Sox1P53783 Olfr93-201ENSMUST00000171679 1045 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Sox1P53783 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC8.3□□□□□ -1.08
Sox1P53783 Gm24812-201ENSMUST00000175315 284 ntBASIC8.3□□□□□ -1.08
Sox1P53783 Prh1-203ENSMUST00000177523 993 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
Sox1P53783 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Sox1P53783 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC8.3□□□□□ -1.08
Sox1P53783 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC8.3□□□□□ -1.08
Sox1P53783 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Sox1P53783 Gm45335-201ENSMUST00000210618 401 ntTSL 5 BASIC8.3□□□□□ -1.08
Sox1P53783 AC148328.2-201ENSMUST00000216960 262 ntBASIC8.3□□□□□ -1.08
Sox1P53783 AC163621.1-201ENSMUST00000220695 379 ntBASIC8.3□□□□□ -1.08
Sox1P53783 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC8.3□□□□□ -1.08
Sox1P53783 Gm5087-204ENSMUST00000225820 645 ntBASIC8.3□□□□□ -1.08
Sox1P53783 AC134864.1-201ENSMUST00000226326 511 ntBASIC8.3□□□□□ -1.08
Sox1P53783 Pfdn5-202ENSMUST00000062492 464 ntTSL 3 BASIC8.3□□□□□ -1.08
Sox1P53783 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Sox1P53783 Mir135b-201ENSMUST00000083501 97 ntBASIC8.3□□□□□ -1.08
Sox1P53783 Car1-201ENSMUST00000094365 1180 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms