Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cux1P53564 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cux1P53564 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cux1P53564 Gm35638-201ENSMUST00000220724 652 ntBASIC11.51□□□□□ -0.57
Cux1P53564 Gm46424-201ENSMUST00000221567 168 ntBASIC11.51□□□□□ -0.57
Cux1P53564 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC11.51□□□□□ -0.57
Cux1P53564 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cux1P53564 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cux1P53564 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Cux1P53564 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Cux1P53564 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Cux1P53564 Phldb2-202ENSMUST00000076333 5347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cux1P53564 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cux1P53564 Lhfpl2-202ENSMUST00000118195 3611 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cux1P53564 Scn2a-205ENSMUST00000200829 6348 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Cux1P53564 Etohd2-201ENSMUST00000162450 4862 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cux1P53564 Erc1-203ENSMUST00000183703 8760 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cux1P53564 Olfr1357-204ENSMUST00000213877 2161 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Cux1P53564 Gm37549-201ENSMUST00000194096 4065 ntBASIC11.51□□□□□ -0.57
Cux1P53564 Bdnf-202ENSMUST00000111042 3905 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cux1P53564 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC11.51□□□□□ -0.57
Cux1P53564 Kif1b-203ENSMUST00000060537 10233 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cux1P53564 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Cux1P53564 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cux1P53564 Gm43430-201ENSMUST00000196513 3897 ntBASIC11.5□□□□□ -0.57
Cux1P53564 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Cux1P53564 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cux1P53564 Gm10136-201ENSMUST00000183196 435 ntBASIC11.5□□□□□ -0.57
Cux1P53564 Gm21614-201ENSMUST00000183260 1005 ntBASIC11.5□□□□□ -0.57
Cux1P53564 Gm29043-201ENSMUST00000186371 623 ntTSL 5 BASIC11.5□□□□□ -0.57
Cux1P53564 Gm28147-201ENSMUST00000187133 621 ntTSL 5 BASIC11.5□□□□□ -0.57
Cux1P53564 Gm29363-201ENSMUST00000189365 621 ntTSL 5 BASIC11.5□□□□□ -0.57
Cux1P53564 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Cux1P53564 Gm9118-201ENSMUST00000219246 754 ntBASIC11.5□□□□□ -0.57
Cux1P53564 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cux1P53564 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC11.5□□□□□ -0.57
Cux1P53564 AC114008.1-201ENSMUST00000226193 937 ntBASIC11.5□□□□□ -0.57
Cux1P53564 Cst8-201ENSMUST00000028931 768 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cux1P53564 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Cux1P53564 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cux1P53564 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cux1P53564 Tbc1d24-204ENSMUST00000167791 4383 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cux1P53564 Gm28581-201ENSMUST00000186086 2177 ntBASIC11.5□□□□□ -0.57
Cux1P53564 Pbrm1-204ENSMUST00000090214 6212 ntTSL 5 BASIC11.5□□□□□ -0.57
Cux1P53564 Clip4-201ENSMUST00000024854 4055 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cux1P53564 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC11.5□□□□□ -0.57
Cux1P53564 9330102E08Rik-201ENSMUST00000204642 3843 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cux1P53564 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cux1P53564 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Cux1P53564 Stat2-202ENSMUST00000105238 4397 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cux1P53564 Gm37121-201ENSMUST00000192219 2556 ntBASIC11.5□□□□□ -0.57
Cux1P53564 Sycp1-201ENSMUST00000029448 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cux1P53564 Olfr1509-206ENSMUST00000215030 2525 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Cux1P53564 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC11.5□□□□□ -0.57
Cux1P53564 Gm28965-201ENSMUST00000186015 1500 ntTSL 5 BASIC11.5□□□□□ -0.57
Cux1P53564 Uvssa-201ENSMUST00000087864 7326 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cux1P53564 Gm45903-201ENSMUST00000212891 2898 ntTSL 5 BASIC11.5□□□□□ -0.57
Cux1P53564 Olfr1254-202ENSMUST00000111523 2650 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Cux1P53564 Lrba-206ENSMUST00000195524 3322 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cux1P53564 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Cux1P53564 Trav8-2-201ENSMUST00000130122 337 ntBASIC11.5□□□□□ -0.57
Cux1P53564 Gm28140-201ENSMUST00000190148 1271 ntTSL 5 BASIC11.5□□□□□ -0.57
Cux1P53564 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC11.5□□□□□ -0.57
Cux1P53564 Gm43063-201ENSMUST00000198198 1081 ntBASIC11.5□□□□□ -0.57
Cux1P53564 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Cux1P53564 Gm43033-201ENSMUST00000199682 425 ntBASIC11.5□□□□□ -0.57
Cux1P53564 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Cux1P53564 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC11.5□□□□□ -0.57
Cux1P53564 Gm44971-201ENSMUST00000206192 337 ntBASIC11.5□□□□□ -0.57
Cux1P53564 Gm39271-201ENSMUST00000212881 434 ntTSL 3 BASIC11.5□□□□□ -0.57
Cux1P53564 Cryab-203ENSMUST00000214962 846 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cux1P53564 AC148328.2-201ENSMUST00000216960 262 ntBASIC11.5□□□□□ -0.57
Cux1P53564 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC11.5□□□□□ -0.57
Cux1P53564 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC11.5□□□□□ -0.57
Cux1P53564 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Cux1P53564 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Cux1P53564 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC11.49□□□□□ -0.57
Cux1P53564 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cux1P53564 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Cux1P53564 Inhbe-201ENSMUST00000059718 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cux1P53564 B3gnt2-201ENSMUST00000055549 2602 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cux1P53564 Usp15-201ENSMUST00000020334 4666 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cux1P53564 Gsdmc4-202ENSMUST00000188108 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cux1P53564 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cux1P53564 Mtpn-201ENSMUST00000031866 3960 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cux1P53564 Rreb1-203ENSMUST00000110238 7437 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cux1P53564 Myo9a-206ENSMUST00000136740 12252 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Cux1P53564 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cux1P53564 Klf5-202ENSMUST00000226784 2852 ntBASIC11.49□□□□□ -0.57
Cux1P53564 Cfap65-201ENSMUST00000094844 5727 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cux1P53564 Gimd1-203ENSMUST00000212594 1432 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Cux1P53564 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cux1P53564 Lef1-203ENSMUST00000098611 2298 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cux1P53564 Gm42669-202ENSMUST00000160160 3080 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Cux1P53564 Gm5255-201ENSMUST00000120125 642 ntBASIC11.49□□□□□ -0.57
Cux1P53564 Gm14489-201ENSMUST00000120868 901 ntBASIC11.49□□□□□ -0.57
Cux1P53564 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Cux1P53564 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC11.49□□□□□ -0.57
Cux1P53564 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC11.49□□□□□ -0.57
Cux1P53564 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms