Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Adgrl2-220ENSMUST00000200543 5509 ntAPPRIS ALT1 TSL 5 BASIC8.1□□□□□ -1.11
Shmt1P50431 Gm45634-201ENSMUST00000209736 1990 ntBASIC8.1□□□□□ -1.11
Shmt1P50431 Gm37465-201ENSMUST00000192845 3290 ntBASIC8.1□□□□□ -1.11
Shmt1P50431 Olfr551-202ENSMUST00000213540 5440 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Shmt1P50431 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Shmt1P50431 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Shmt1P50431 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Shmt1P50431 Gm24986-201ENSMUST00000104452 132 ntBASIC8.1□□□□□ -1.11
Shmt1P50431 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC8.1□□□□□ -1.11
Shmt1P50431 Paqr5-202ENSMUST00000113990 1073 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Shmt1P50431 Gm15345-201ENSMUST00000128240 663 ntTSL 3 BASIC8.1□□□□□ -1.11
Shmt1P50431 Gm15668-201ENSMUST00000140506 678 ntTSL 3 BASIC8.1□□□□□ -1.11
Shmt1P50431 1810062O18Rik-204ENSMUST00000141265 751 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Shmt1P50431 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC8.1□□□□□ -1.11
Shmt1P50431 Gm25164-201ENSMUST00000158908 116 ntBASIC8.1□□□□□ -1.11
Shmt1P50431 Gm7763-201ENSMUST00000182220 1006 ntBASIC8.1□□□□□ -1.11
Shmt1P50431 Gm27401-201ENSMUST00000184052 173 ntBASIC8.1□□□□□ -1.11
Shmt1P50431 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Shmt1P50431 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC8.1□□□□□ -1.11
Shmt1P50431 Gm29143-201ENSMUST00000189462 201 ntBASIC8.1□□□□□ -1.11
Shmt1P50431 Gm4785-201ENSMUST00000191025 751 ntBASIC8.1□□□□□ -1.11
Shmt1P50431 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Shmt1P50431 Gm43023-201ENSMUST00000197583 2106 ntBASIC8.1□□□□□ -1.11
Shmt1P50431 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC8.1□□□□□ -1.11
Shmt1P50431 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Shmt1P50431 Gm32842-201ENSMUST00000212653 738 ntBASIC8.1□□□□□ -1.11
Shmt1P50431 Cryab-203ENSMUST00000214962 846 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Shmt1P50431 Gm39465-202ENSMUST00000215177 470 ntTSL 5 BASIC8.1□□□□□ -1.11
Shmt1P50431 AC139323.1-201ENSMUST00000223370 1040 ntBASIC8.1□□□□□ -1.11
Shmt1P50431 Zfp874a-208ENSMUST00000225479 1092 ntBASIC8.1□□□□□ -1.11
Shmt1P50431 AC152940.1-201ENSMUST00000226504 139 ntBASIC8.1□□□□□ -1.11
Shmt1P50431 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Shmt1P50431 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Shmt1P50431 Cyp24a1-201ENSMUST00000038824 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Shmt1P50431 Prpf18-201ENSMUST00000035721 3522 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Shmt1P50431 Slc5a7-201ENSMUST00000095712 5176 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Shmt1P50431 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC8.1□□□□□ -1.11
Shmt1P50431 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Shmt1P50431 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Shmt1P50431 Gm38315-201ENSMUST00000194286 2437 ntBASIC8.1□□□□□ -1.11
Shmt1P50431 Rgs8-203ENSMUST00000111812 3625 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Shmt1P50431 Itgae-202ENSMUST00000102537 3825 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Shmt1P50431 Scn8a-204ENSMUST00000108909 11436 ntTSL 5 BASIC8.1□□□□□ -1.11
Shmt1P50431 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Shmt1P50431 Farsb-201ENSMUST00000068333 1951 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Shmt1P50431 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Shmt1P50431 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
Shmt1P50431 4930551I15Rik-201ENSMUST00000219700 2143 ntTSL 5 BASIC8.09□□□□□ -1.11
Shmt1P50431 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Shmt1P50431 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Shmt1P50431 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Shmt1P50431 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Shmt1P50431 Lhfpl2-204ENSMUST00000121618 4209 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Shmt1P50431 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Shmt1P50431 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Shmt1P50431 Gm22152-201ENSMUST00000116966 125 ntBASIC8.09□□□□□ -1.11
Shmt1P50431 Gm5228-201ENSMUST00000117186 357 ntBASIC8.09□□□□□ -1.11
Shmt1P50431 Gm7129-201ENSMUST00000117402 997 ntBASIC8.09□□□□□ -1.11
Shmt1P50431 Gm11383-201ENSMUST00000121346 807 ntBASIC8.09□□□□□ -1.11
Shmt1P50431 Gm14110-201ENSMUST00000127688 758 ntTSL 5 BASIC8.09□□□□□ -1.11
Shmt1P50431 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Shmt1P50431 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC8.09□□□□□ -1.11
Shmt1P50431 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Shmt1P50431 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Shmt1P50431 Gm5656-201ENSMUST00000171020 1096 ntBASIC8.09□□□□□ -1.11
Shmt1P50431 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC8.09□□□□□ -1.11
Shmt1P50431 Gm27238-201ENSMUST00000185180 417 ntTSL 3 BASIC8.09□□□□□ -1.11
Shmt1P50431 Gm7436-201ENSMUST00000187229 391 ntBASIC8.09□□□□□ -1.11
Shmt1P50431 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC8.09□□□□□ -1.11
Shmt1P50431 Gm29435-201ENSMUST00000191310 689 ntBASIC8.09□□□□□ -1.11
Shmt1P50431 Gm38063-201ENSMUST00000193990 342 ntBASIC8.09□□□□□ -1.11
Shmt1P50431 Gm20690-202ENSMUST00000195126 355 ntBASIC8.09□□□□□ -1.11
Shmt1P50431 Gm38018-201ENSMUST00000195651 540 ntBASIC8.09□□□□□ -1.11
Shmt1P50431 Gm3103-201ENSMUST00000198073 752 ntBASIC8.09□□□□□ -1.11
Shmt1P50431 Tex26-207ENSMUST00000202920 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Shmt1P50431 Gm18765-201ENSMUST00000203166 660 ntBASIC8.09□□□□□ -1.11
Shmt1P50431 Gm19172-201ENSMUST00000203170 1246 ntBASIC8.09□□□□□ -1.11
Shmt1P50431 Gm44252-201ENSMUST00000204187 330 ntBASIC8.09□□□□□ -1.11
Shmt1P50431 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Shmt1P50431 Gm4780-201ENSMUST00000213206 1242 ntBASIC8.09□□□□□ -1.11
Shmt1P50431 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Shmt1P50431 AC165256.1-201ENSMUST00000216687 670 ntTSL 2 BASIC8.09□□□□□ -1.11
Shmt1P50431 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC8.09□□□□□ -1.11
Shmt1P50431 AC118006.3-201ENSMUST00000223948 1176 ntBASIC8.09□□□□□ -1.11
Shmt1P50431 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
Shmt1P50431 Olfr984-201ENSMUST00000056795 945 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Shmt1P50431 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Shmt1P50431 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Shmt1P50431 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC8.09□□□□□ -1.11
Shmt1P50431 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Shmt1P50431 Abca4-201ENSMUST00000013995 7263 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Shmt1P50431 Grhl1-201ENSMUST00000020985 3070 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Shmt1P50431 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Shmt1P50431 Speer4e-201ENSMUST00000159973 1603 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Shmt1P50431 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Shmt1P50431 Gm7961-201ENSMUST00000201338 1436 ntBASIC8.09□□□□□ -1.11
Shmt1P50431 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Shmt1P50431 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Shmt1P50431 Lig3-201ENSMUST00000021039 5957 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Shmt1P50431 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms