Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm17908-201ENSMUST00000205552 1256 ntBASIC7.72□□□□□ -1.17
HttP42859 AC119894.1-201ENSMUST00000220399 350 ntBASIC7.72□□□□□ -1.17
HttP42859 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
HttP42859 Mir134-201ENSMUST00000083492 71 ntBASIC7.72□□□□□ -1.17
HttP42859 Mir296-201ENSMUST00000083587 79 ntBASIC7.72□□□□□ -1.17
HttP42859 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
HttP42859 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
HttP42859 Ano7-202ENSMUST00000186641 3984 ntAPPRIS P3 TSL 5 BASIC7.71□□□□□ -1.17
HttP42859 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.17
HttP42859 Sema4d-202ENSMUST00000110039 4415 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
HttP42859 Cul2-201ENSMUST00000025073 3727 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
HttP42859 Ano9-201ENSMUST00000067836 3019 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
HttP42859 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC7.71□□□□□ -1.17
HttP42859 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
HttP42859 Filip1-201ENSMUST00000093811 4640 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
HttP42859 Mir674-201ENSMUST00000102421 100 ntBASIC7.71□□□□□ -1.18
HttP42859 Gm6977-201ENSMUST00000121568 512 ntBASIC7.71□□□□□ -1.18
HttP42859 Gm25387-201ENSMUST00000157813 132 ntBASIC7.71□□□□□ -1.18
HttP42859 Gm18199-201ENSMUST00000173820 835 ntBASIC7.71□□□□□ -1.18
HttP42859 Gm20397-201ENSMUST00000174520 362 ntBASIC7.71□□□□□ -1.18
HttP42859 Gm18191-201ENSMUST00000174624 824 ntBASIC7.71□□□□□ -1.18
HttP42859 Gm21241-201ENSMUST00000179551 934 ntBASIC7.71□□□□□ -1.18
HttP42859 Gm2042-202ENSMUST00000180706 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
HttP42859 Mir7028-201ENSMUST00000185016 64 ntBASIC7.71□□□□□ -1.18
HttP42859 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
HttP42859 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
HttP42859 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
HttP42859 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
HttP42859 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
HttP42859 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
HttP42859 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
HttP42859 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
HttP42859 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
HttP42859 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
HttP42859 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
HttP42859 Gm20819-201ENSMUST00000191091 925 ntBASIC7.71□□□□□ -1.18
HttP42859 Gm20871-201ENSMUST00000191322 931 ntBASIC7.71□□□□□ -1.18
HttP42859 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
HttP42859 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
HttP42859 Gm37573-201ENSMUST00000193993 931 ntTSL 5 BASIC7.71□□□□□ -1.18
HttP42859 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
HttP42859 Gm6077-201ENSMUST00000196008 499 ntBASIC7.71□□□□□ -1.18
HttP42859 Gm42619-201ENSMUST00000197564 1136 ntBASIC7.71□□□□□ -1.18
HttP42859 Olfr714-201ENSMUST00000054629 954 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
HttP42859 Clec2g-202ENSMUST00000075789 729 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
HttP42859 Gm36938-201ENSMUST00000191612 2696 ntBASIC7.71□□□□□ -1.18
HttP42859 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
HttP42859 Phactr4-203ENSMUST00000102568 4614 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
HttP42859 Arsg-203ENSMUST00000106697 3232 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
HttP42859 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
HttP42859 Rnf222-201ENSMUST00000065213 3463 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
HttP42859 Atp10d-201ENSMUST00000094710 2365 ntTSL 5 BASIC7.71□□□□□ -1.18
HttP42859 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
HttP42859 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
HttP42859 Gm24434-201ENSMUST00000104081 132 ntBASIC7.71□□□□□ -1.18
HttP42859 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
HttP42859 Gm12565-201ENSMUST00000119004 649 ntBASIC7.71□□□□□ -1.18
HttP42859 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC7.71□□□□□ -1.18
HttP42859 Gm11107-201ENSMUST00000165414 505 ntBASIC7.71□□□□□ -1.18
HttP42859 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
HttP42859 Gm2229-201ENSMUST00000193328 710 ntBASIC7.71□□□□□ -1.18
HttP42859 Gm44386-201ENSMUST00000204288 429 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
HttP42859 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC7.71□□□□□ -1.18
HttP42859 Gm3678-201ENSMUST00000218888 492 ntBASIC7.71□□□□□ -1.18
HttP42859 AC154640.1-202ENSMUST00000227828 496 ntBASIC7.71□□□□□ -1.18
HttP42859 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC7.71□□□□□ -1.18
HttP42859 Arhgap1-201ENSMUST00000090614 2866 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
HttP42859 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC7.71□□□□□ -1.18
HttP42859 Msh4-205ENSMUST00000190449 3110 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
HttP42859 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
HttP42859 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
HttP42859 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
HttP42859 Gpr50-201ENSMUST00000070449 3069 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
HttP42859 Ppp6c-201ENSMUST00000028087 4115 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
HttP42859 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
HttP42859 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
HttP42859 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
HttP42859 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
HttP42859 Gm23910-201ENSMUST00000104597 132 ntBASIC7.7□□□□□ -1.18
HttP42859 Gm15366-201ENSMUST00000118433 1019 ntBASIC7.7□□□□□ -1.18
HttP42859 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
HttP42859 Igkv4-73-201ENSMUST00000199760 358 ntBASIC7.7□□□□□ -1.18
HttP42859 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
HttP42859 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
HttP42859 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
HttP42859 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC7.7□□□□□ -1.18
HttP42859 Scml2-205ENSMUST00000101113 2931 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
HttP42859 4921517D22Rik-201ENSMUST00000061597 3149 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
HttP42859 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC7.7□□□□□ -1.18
HttP42859 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC7.7□□□□□ -1.18
HttP42859 Ston1-205ENSMUST00000150023 3231 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
HttP42859 Zfp677-202ENSMUST00000162659 2917 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
HttP42859 Ralyl-203ENSMUST00000171075 1459 ntTSL 5 BASIC7.7□□□□□ -1.18
HttP42859 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC7.7□□□□□ -1.18
HttP42859 Gm37092-201ENSMUST00000193381 1518 ntBASIC7.7□□□□□ -1.18
HttP42859 Gm42973-201ENSMUST00000197913 3200 ntBASIC7.7□□□□□ -1.18
HttP42859 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
HttP42859 Gm5113-201ENSMUST00000085668 2955 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
HttP42859 Luzp1-203ENSMUST00000105849 7438 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
HttP42859 Celf2-223ENSMUST00000182851 3587 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms