Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm8878-201ENSMUST00000173552 1725 ntBASIC6.06□□□□□ -1.44
Sdc1P18828 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sdc1P18828 Gm5228-201ENSMUST00000117186 357 ntBASIC6.06□□□□□ -1.44
Sdc1P18828 Gm11987-201ENSMUST00000118524 381 ntBASIC6.06□□□□□ -1.44
Sdc1P18828 Gm9164-201ENSMUST00000118700 1014 ntBASIC6.06□□□□□ -1.44
Sdc1P18828 Gm10443-201ENSMUST00000119024 210 ntBASIC6.06□□□□□ -1.44
Sdc1P18828 Gm11416-201ENSMUST00000119111 863 ntBASIC6.06□□□□□ -1.44
Sdc1P18828 Gm13680-201ENSMUST00000119790 793 ntBASIC6.06□□□□□ -1.44
Sdc1P18828 Gm11676-201ENSMUST00000120443 490 ntBASIC6.06□□□□□ -1.44
Sdc1P18828 Epp13-201ENSMUST00000121024 957 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Sdc1P18828 Tbata-209ENSMUST00000148181 1017 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sdc1P18828 Gm23432-201ENSMUST00000157181 131 ntBASIC6.06□□□□□ -1.44
Sdc1P18828 Gm24004-201ENSMUST00000158460 178 ntBASIC6.06□□□□□ -1.44
Sdc1P18828 Gm16118-201ENSMUST00000161914 680 ntTSL 2 BASIC6.06□□□□□ -1.44
Sdc1P18828 Gm17097-201ENSMUST00000166414 714 ntBASIC6.06□□□□□ -1.44
Sdc1P18828 Gm20492-201ENSMUST00000172591 286 ntTSL 3 BASIC6.06□□□□□ -1.44
Sdc1P18828 Zfp419-201ENSMUST00000173446 916 ntBASIC6.06□□□□□ -1.44
Sdc1P18828 Gm18822-201ENSMUST00000182857 1025 ntBASIC6.06□□□□□ -1.44
Sdc1P18828 Mir7060-201ENSMUST00000183486 137 ntBASIC6.06□□□□□ -1.44
Sdc1P18828 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC6.06□□□□□ -1.44
Sdc1P18828 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC6.06□□□□□ -1.44
Sdc1P18828 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC6.06□□□□□ -1.44
Sdc1P18828 Gm42667-201ENSMUST00000196132 234 ntBASIC6.06□□□□□ -1.44
Sdc1P18828 Gm30708-201ENSMUST00000202183 312 ntBASIC6.06□□□□□ -1.44
Sdc1P18828 Gm18690-201ENSMUST00000204488 985 ntBASIC6.06□□□□□ -1.44
Sdc1P18828 Gm26911-203ENSMUST00000204781 369 ntTSL 3 BASIC6.06□□□□□ -1.44
Sdc1P18828 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC6.06□□□□□ -1.44
Sdc1P18828 AC153937.3-201ENSMUST00000217814 706 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sdc1P18828 Gm10451-202ENSMUST00000219367 855 ntTSL 2 BASIC6.06□□□□□ -1.44
Sdc1P18828 Gm21818-202ENSMUST00000225144 894 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Sdc1P18828 2410137M14Rik-201ENSMUST00000039846 865 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sdc1P18828 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sdc1P18828 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sdc1P18828 Olfr444-201ENSMUST00000095955 1050 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Sdc1P18828 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC6.06□□□□□ -1.44
Sdc1P18828 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sdc1P18828 Vwa3b-206ENSMUST00000169057 1499 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Sdc1P18828 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Sdc1P18828 Fbxw19-201ENSMUST00000076617 1483 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sdc1P18828 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sdc1P18828 Keg1-201ENSMUST00000025598 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sdc1P18828 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sdc1P18828 Gm37142-201ENSMUST00000193718 3110 ntBASIC6.06□□□□□ -1.44
Sdc1P18828 Tshr-202ENSMUST00000021346 4311 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sdc1P18828 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sdc1P18828 Tlr1-202ENSMUST00000197315 3025 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sdc1P18828 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sdc1P18828 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sdc1P18828 Sgms2-201ENSMUST00000090246 5801 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Sdc1P18828 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Sdc1P18828 Gm21698-202ENSMUST00000191203 2995 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Sdc1P18828 Gm46348-201ENSMUST00000222917 2151 ntTSL 5 BASIC6.06□□□□□ -1.44
Sdc1P18828 Gm19683-201ENSMUST00000209748 1781 ntBASIC6.06□□□□□ -1.44
Sdc1P18828 AC154747.4-203ENSMUST00000225893 1384 ntBASIC6.06□□□□□ -1.44
Sdc1P18828 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Sdc1P18828 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sdc1P18828 Rasgrp1-203ENSMUST00000172901 1903 ntTSL 5 BASIC6.05□□□□□ -1.44
Sdc1P18828 Gm8700-201ENSMUST00000222187 3054 ntBASIC6.05□□□□□ -1.44
Sdc1P18828 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC6.05□□□□□ -1.44
Sdc1P18828 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Sdc1P18828 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Sdc1P18828 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
Sdc1P18828 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sdc1P18828 Olfr329-ps-201ENSMUST00000108822 1300 ntAPPRIS ALT2 TSL 3 BASIC6.05□□□□□ -1.44
Sdc1P18828 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sdc1P18828 CT010470.1-201ENSMUST00000225364 1876 ntBASIC6.05□□□□□ -1.44
Sdc1P18828 Gm12378-201ENSMUST00000116171 1461 ntBASIC6.05□□□□□ -1.44
Sdc1P18828 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sdc1P18828 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
Sdc1P18828 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sdc1P18828 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sdc1P18828 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sdc1P18828 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sdc1P18828 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sdc1P18828 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sdc1P18828 Uqcrq-202ENSMUST00000109019 504 ntTSL 2 BASIC6.05□□□□□ -1.44
Sdc1P18828 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sdc1P18828 Gm25000-201ENSMUST00000117016 114 ntBASIC6.05□□□□□ -1.44
Sdc1P18828 Gm12220-201ENSMUST00000118476 172 ntBASIC6.05□□□□□ -1.44
Sdc1P18828 Olfr1127-ps1-201ENSMUST00000119555 892 ntBASIC6.05□□□□□ -1.44
Sdc1P18828 Isg20-203ENSMUST00000120331 845 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sdc1P18828 Gm11474-201ENSMUST00000120814 277 ntBASIC6.05□□□□□ -1.44
Sdc1P18828 Gm14617-201ENSMUST00000128053 798 ntTSL 5 BASIC6.05□□□□□ -1.44
Sdc1P18828 Gm26368-201ENSMUST00000157826 118 ntBASIC6.05□□□□□ -1.44
Sdc1P18828 Gm22262-201ENSMUST00000158713 86 ntBASIC6.05□□□□□ -1.44
Sdc1P18828 Gm16238-201ENSMUST00000159343 586 ntBASIC6.05□□□□□ -1.44
Sdc1P18828 Gm16585-201ENSMUST00000161442 610 ntBASIC6.05□□□□□ -1.44
Sdc1P18828 4930519F09Rik-202ENSMUST00000163084 1111 ntBASIC6.05□□□□□ -1.44
Sdc1P18828 Gm4302-201ENSMUST00000168769 927 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Sdc1P18828 Gm20451-201ENSMUST00000173452 273 ntBASIC6.05□□□□□ -1.44
Sdc1P18828 1700085C21Rik-201ENSMUST00000187123 1082 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sdc1P18828 Gm28145-201ENSMUST00000189742 380 ntBASIC6.05□□□□□ -1.44
Sdc1P18828 Gm28530-201ENSMUST00000190473 577 ntBASIC6.05□□□□□ -1.44
Sdc1P18828 Gm8388-201ENSMUST00000193000 756 ntBASIC6.05□□□□□ -1.44
Sdc1P18828 Gm18857-201ENSMUST00000210421 901 ntBASIC6.05□□□□□ -1.44
Sdc1P18828 AC153561.1-201ENSMUST00000215943 469 ntBASIC6.05□□□□□ -1.44
Sdc1P18828 AC025913.1-202ENSMUST00000220385 824 ntTSL 5 BASIC6.05□□□□□ -1.44
Sdc1P18828 Gm5374-202ENSMUST00000222910 314 ntBASIC6.05□□□□□ -1.44
Sdc1P18828 AL591207.2-201ENSMUST00000222991 337 ntBASIC6.05□□□□□ -1.44
Sdc1P18828 AC163667.2-201ENSMUST00000223769 791 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms