Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm20223-201ENSMUST00000199932 805 ntBASIC6.13□□□□□ -1.43
Hmgb3O54879 Gm45295-201ENSMUST00000210393 1046 ntBASIC6.13□□□□□ -1.43
Hmgb3O54879 AC207128.2-202ENSMUST00000224010 808 ntBASIC6.13□□□□□ -1.43
Hmgb3O54879 AC154747.2-201ENSMUST00000225109 780 ntBASIC6.13□□□□□ -1.43
Hmgb3O54879 Gstm5-201ENSMUST00000004134 945 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hmgb3O54879 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hmgb3O54879 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Hmgb3O54879 Csnk1g1-209ENSMUST00000205379 4001 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
Hmgb3O54879 Gsdme-202ENSMUST00000101405 4383 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hmgb3O54879 AC122426.2-201ENSMUST00000216522 2947 ntBASIC6.13□□□□□ -1.43
Hmgb3O54879 Gm12378-201ENSMUST00000116171 1461 ntBASIC6.13□□□□□ -1.43
Hmgb3O54879 Gm37483-201ENSMUST00000194382 1484 ntBASIC6.13□□□□□ -1.43
Hmgb3O54879 Rab38-201ENSMUST00000107256 1577 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hmgb3O54879 Gm45210-201ENSMUST00000206401 1577 ntBASIC6.13□□□□□ -1.43
Hmgb3O54879 AC138284.1-201ENSMUST00000214258 3236 ntBASIC6.13□□□□□ -1.43
Hmgb3O54879 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC6.13□□□□□ -1.43
Hmgb3O54879 Entpd3-201ENSMUST00000047687 3453 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hmgb3O54879 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hmgb3O54879 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC6.13□□□□□ -1.43
Hmgb3O54879 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hmgb3O54879 Hcrtr2-201ENSMUST00000063140 3761 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hmgb3O54879 Gm29571-201ENSMUST00000191547 1909 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
Hmgb3O54879 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hmgb3O54879 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
Hmgb3O54879 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC6.13□□□□□ -1.43
Hmgb3O54879 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hmgb3O54879 Alg11-201ENSMUST00000072572 4960 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Hmgb3O54879 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hmgb3O54879 Gja5-201ENSMUST00000072600 3109 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hmgb3O54879 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Hmgb3O54879 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hmgb3O54879 Gm37925-201ENSMUST00000195352 4255 ntBASIC6.12□□□□□ -1.43
Hmgb3O54879 Uqcrq-202ENSMUST00000109019 504 ntTSL 2 BASIC6.12□□□□□ -1.43
Hmgb3O54879 Gm15720-201ENSMUST00000117133 282 ntBASIC6.12□□□□□ -1.43
Hmgb3O54879 Gm12955-201ENSMUST00000119689 957 ntBASIC6.12□□□□□ -1.43
Hmgb3O54879 Gm12919-201ENSMUST00000119855 1594 ntBASIC6.12□□□□□ -1.43
Hmgb3O54879 Olfr268-ps1-201ENSMUST00000121395 945 ntBASIC6.12□□□□□ -1.43
Hmgb3O54879 Gm12518-201ENSMUST00000122075 779 ntBASIC6.12□□□□□ -1.43
Hmgb3O54879 Kbtbd8os-201ENSMUST00000135145 427 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Hmgb3O54879 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC6.12□□□□□ -1.43
Hmgb3O54879 Gm10693-201ENSMUST00000144146 2037 ntBASIC6.12□□□□□ -1.43
Hmgb3O54879 4930562A09Rik-201ENSMUST00000153818 734 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Hmgb3O54879 Gm23663-201ENSMUST00000158045 80 ntBASIC6.12□□□□□ -1.43
Hmgb3O54879 D330041H03Rik-203ENSMUST00000180579 605 ntTSL 5 BASIC6.12□□□□□ -1.43
Hmgb3O54879 2310069B03Rik-202ENSMUST00000186147 1833 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Hmgb3O54879 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Hmgb3O54879 Gm38033-201ENSMUST00000192037 269 ntTSL 5 BASIC6.12□□□□□ -1.43
Hmgb3O54879 Gm38145-201ENSMUST00000192319 693 ntBASIC6.12□□□□□ -1.43
Hmgb3O54879 Gm19035-202ENSMUST00000194575 959 ntBASIC6.12□□□□□ -1.43
Hmgb3O54879 Gm37653-201ENSMUST00000195401 3578 ntBASIC6.12□□□□□ -1.43
Hmgb3O54879 Gm17978-201ENSMUST00000195986 769 ntBASIC6.12□□□□□ -1.43
Hmgb3O54879 Gm43322-201ENSMUST00000196232 1612 ntBASIC6.12□□□□□ -1.43
Hmgb3O54879 Gm3604-203ENSMUST00000202194 736 ntTSL 3 BASIC6.12□□□□□ -1.43
Hmgb3O54879 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC6.12□□□□□ -1.43
Hmgb3O54879 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC6.12□□□□□ -1.43
Hmgb3O54879 Gm30771-201ENSMUST00000205683 737 ntTSL 3 BASIC6.12□□□□□ -1.43
Hmgb3O54879 Id2-201ENSMUST00000020974 1270 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hmgb3O54879 Gm45527-201ENSMUST00000211052 774 ntBASIC6.12□□□□□ -1.43
Hmgb3O54879 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Hmgb3O54879 CT025619.3-201ENSMUST00000216299 3267 ntBASIC6.12□□□□□ -1.43
Hmgb3O54879 Olfr371-202ENSMUST00000218663 1162 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Hmgb3O54879 AC153937.2-202ENSMUST00000219583 670 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Hmgb3O54879 AC165249.1-203ENSMUST00000219976 392 ntTSL 2 BASIC6.12□□□□□ -1.43
Hmgb3O54879 AC160863.3-201ENSMUST00000220129 1228 ntTSL 5 BASIC6.12□□□□□ -1.43
Hmgb3O54879 Gm33682-201ENSMUST00000222233 256 ntTSL 3 BASIC6.12□□□□□ -1.43
Hmgb3O54879 AC147096.1-201ENSMUST00000227648 352 ntBASIC6.12□□□□□ -1.43
Hmgb3O54879 AC132863.1-201ENSMUST00000228413 751 ntBASIC6.12□□□□□ -1.43
Hmgb3O54879 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hmgb3O54879 6030452D12Rik-201ENSMUST00000066875 669 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hmgb3O54879 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hmgb3O54879 Cd44-207ENSMUST00000111194 5045 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Hmgb3O54879 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Hmgb3O54879 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC6.12□□□□□ -1.43
Hmgb3O54879 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Hmgb3O54879 Gm3883-201ENSMUST00000098119 3229 ntBASIC6.12□□□□□ -1.43
Hmgb3O54879 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Hmgb3O54879 Catspere1-201ENSMUST00000194528 2949 ntBASIC6.12□□□□□ -1.43
Hmgb3O54879 AC158988.1-201ENSMUST00000226731 2624 ntBASIC6.12□□□□□ -1.43
Hmgb3O54879 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC6.11□□□□□ -1.43
Hmgb3O54879 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb3O54879 C920009B18Rik-202ENSMUST00000181223 4535 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb3O54879 C130093G08Rik-201ENSMUST00000202489 2226 ntBASIC6.11□□□□□ -1.43
Hmgb3O54879 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb3O54879 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Hmgb3O54879 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb3O54879 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC6.11□□□□□ -1.43
Hmgb3O54879 Arhgef3-202ENSMUST00000224981 3618 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Hmgb3O54879 Gm43285-201ENSMUST00000196563 3592 ntBASIC6.11□□□□□ -1.43
Hmgb3O54879 Gm18313-201ENSMUST00000221036 1784 ntBASIC6.11□□□□□ -1.43
Hmgb3O54879 Scd3-201ENSMUST00000026220 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb3O54879 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
Hmgb3O54879 Zcwpw2-201ENSMUST00000111769 1505 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb3O54879 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb3O54879 Gm20609-201ENSMUST00000177104 1527 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb3O54879 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Hmgb3O54879 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Hmgb3O54879 Gm20531-201ENSMUST00000174861 1373 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb3O54879 Gm7842-201ENSMUST00000217691 1379 ntBASIC6.11□□□□□ -1.43
Hmgb3O54879 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Hmgb3O54879 Nppb-201ENSMUST00000103231 781 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 95.3 ms