Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm15362-201ENSMUST00000121459 388 ntBASIC9.53□□□□□ -0.88
NpcdF8VQB8 Fam229b-203ENSMUST00000125042 707 ntTSL 5 BASIC9.53□□□□□ -0.88
NpcdF8VQB8 Fam229b-206ENSMUST00000136546 592 ntAPPRIS P1 TSL 3 BASIC9.53□□□□□ -0.88
NpcdF8VQB8 Erich2os-201ENSMUST00000150702 608 ntTSL 5 BASIC9.53□□□□□ -0.88
NpcdF8VQB8 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC9.53□□□□□ -0.88
NpcdF8VQB8 Ube2v1-207ENSMUST00000151365 924 ntTSL 2 BASIC9.53□□□□□ -0.88
NpcdF8VQB8 Gm26321-201ENSMUST00000157740 242 ntBASIC9.53□□□□□ -0.88
NpcdF8VQB8 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC9.53□□□□□ -0.88
NpcdF8VQB8 Mir6908-201ENSMUST00000184056 63 ntBASIC9.53□□□□□ -0.88
NpcdF8VQB8 Gm27187-202ENSMUST00000184873 606 ntTSL 3 BASIC9.53□□□□□ -0.88
NpcdF8VQB8 Gm29464-201ENSMUST00000187692 513 ntBASIC9.53□□□□□ -0.88
NpcdF8VQB8 Gm5539-201ENSMUST00000192177 966 ntBASIC9.53□□□□□ -0.88
NpcdF8VQB8 Gm44279-201ENSMUST00000205154 472 ntBASIC9.53□□□□□ -0.88
NpcdF8VQB8 Gm44931-201ENSMUST00000206056 545 ntBASIC9.53□□□□□ -0.88
NpcdF8VQB8 Gm44590-201ENSMUST00000206161 391 ntBASIC9.53□□□□□ -0.88
NpcdF8VQB8 Tab3-201ENSMUST00000048250 6364 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
NpcdF8VQB8 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
NpcdF8VQB8 Prc1-210ENSMUST00000174172 3008 ntTSL 5 BASIC9.53□□□□□ -0.88
NpcdF8VQB8 Ikbkg-202ENSMUST00000064407 4530 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
NpcdF8VQB8 Gm17359-203ENSMUST00000199658 1819 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
NpcdF8VQB8 Gm26792-201ENSMUST00000180538 2799 ntTSL 5 BASIC9.53□□□□□ -0.88
NpcdF8VQB8 Kansl1-203ENSMUST00000106971 5222 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
NpcdF8VQB8 Retreg1-205ENSMUST00000227275 3200 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
NpcdF8VQB8 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
NpcdF8VQB8 Gm43621-201ENSMUST00000202733 2022 ntBASIC9.53□□□□□ -0.88
NpcdF8VQB8 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
NpcdF8VQB8 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC9.53□□□□□ -0.88
NpcdF8VQB8 Cacna2d4-205ENSMUST00000186622 3710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
NpcdF8VQB8 Nudt13-201ENSMUST00000022343 2494 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
NpcdF8VQB8 Zfp940-201ENSMUST00000085792 2764 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
NpcdF8VQB8 Pcdhb3-201ENSMUST00000051754 3787 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
NpcdF8VQB8 Gsdmc-202ENSMUST00000173503 2375 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
NpcdF8VQB8 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
NpcdF8VQB8 Smyd3-204ENSMUST00000128302 6871 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
NpcdF8VQB8 Scn11a-202ENSMUST00000215718 5899 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
NpcdF8VQB8 Gm10513-201ENSMUST00000194203 6468 ntBASIC9.52□□□□□ -0.89
NpcdF8VQB8 Cth-201ENSMUST00000118539 1815 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
NpcdF8VQB8 Pwwp2a-203ENSMUST00000109280 2739 ntAPPRIS ALT2 TSL 2 BASIC9.52□□□□□ -0.89
NpcdF8VQB8 Neurod1-201ENSMUST00000041099 2729 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
NpcdF8VQB8 Sh3bgrl2-201ENSMUST00000113215 4565 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
NpcdF8VQB8 Gm14248-201ENSMUST00000117790 544 ntBASIC9.52□□□□□ -0.89
NpcdF8VQB8 Gm12757-201ENSMUST00000119465 800 ntBASIC9.52□□□□□ -0.89
NpcdF8VQB8 Gm11510-201ENSMUST00000120278 347 ntBASIC9.52□□□□□ -0.89
NpcdF8VQB8 Gm11440-201ENSMUST00000121509 527 ntBASIC9.52□□□□□ -0.89
NpcdF8VQB8 Mettl5os-201ENSMUST00000129114 667 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
NpcdF8VQB8 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC9.52□□□□□ -0.89
NpcdF8VQB8 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
NpcdF8VQB8 Gm15668-201ENSMUST00000140506 678 ntTSL 3 BASIC9.52□□□□□ -0.89
NpcdF8VQB8 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC9.52□□□□□ -0.89
NpcdF8VQB8 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
NpcdF8VQB8 1700122D07Rik-201ENSMUST00000186973 421 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
NpcdF8VQB8 Kirrel3-206ENSMUST00000187625 4108 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
NpcdF8VQB8 Gm43558-201ENSMUST00000200155 210 ntBASIC9.52□□□□□ -0.89
NpcdF8VQB8 Gm44061-201ENSMUST00000203962 1195 ntBASIC9.52□□□□□ -0.89
NpcdF8VQB8 Gm44213-201ENSMUST00000204977 703 ntBASIC9.52□□□□□ -0.89
NpcdF8VQB8 Gm44603-201ENSMUST00000206820 367 ntBASIC9.52□□□□□ -0.89
NpcdF8VQB8 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC9.52□□□□□ -0.89
NpcdF8VQB8 AC122539.1-201ENSMUST00000219925 329 ntBASIC9.52□□□□□ -0.89
NpcdF8VQB8 Gm9472-201ENSMUST00000221625 526 ntBASIC9.52□□□□□ -0.89
NpcdF8VQB8 Gm19238-201ENSMUST00000221936 1260 ntBASIC9.52□□□□□ -0.89
NpcdF8VQB8 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC9.52□□□□□ -0.89
NpcdF8VQB8 AL671874.1-201ENSMUST00000223746 1123 ntBASIC9.52□□□□□ -0.89
NpcdF8VQB8 AC154747.4-201ENSMUST00000224802 903 ntBASIC9.52□□□□□ -0.89
NpcdF8VQB8 AC121912.1-201ENSMUST00000227525 1201 ntBASIC9.52□□□□□ -0.89
NpcdF8VQB8 AC154618.2-201ENSMUST00000228299 452 ntBASIC9.52□□□□□ -0.89
NpcdF8VQB8 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
NpcdF8VQB8 Ocm-202ENSMUST00000085704 330 ntAPPRIS P1 TSL 3 BASIC9.52□□□□□ -0.89
NpcdF8VQB8 Rnase6-201ENSMUST00000095923 1072 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
NpcdF8VQB8 Akap2-207ENSMUST00000107600 7231 ntTSL 2 BASIC9.52□□□□□ -0.89
NpcdF8VQB8 Pde1c-205ENSMUST00000166102 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
NpcdF8VQB8 Ublcp1-201ENSMUST00000102795 2088 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
NpcdF8VQB8 4930555G01Rik-201ENSMUST00000112770 2065 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
NpcdF8VQB8 Gm3099-201ENSMUST00000112787 2065 ntAPPRIS P5 TSL 1 (best) BASIC9.52□□□□□ -0.89
NpcdF8VQB8 E130018O15Rik-201ENSMUST00000069741 3776 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
NpcdF8VQB8 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
NpcdF8VQB8 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC9.52□□□□□ -0.89
NpcdF8VQB8 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC9.52□□□□□ -0.89
NpcdF8VQB8 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC9.52□□□□□ -0.89
NpcdF8VQB8 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC9.52□□□□□ -0.89
NpcdF8VQB8 Extl2-202ENSMUST00000106501 2887 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
NpcdF8VQB8 Rrp12-201ENSMUST00000038677 4319 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
NpcdF8VQB8 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
NpcdF8VQB8 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
NpcdF8VQB8 Mtmr4-203ENSMUST00000119628 4664 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
NpcdF8VQB8 6820431F20Rik-202ENSMUST00000153748 4659 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
NpcdF8VQB8 Slc12a3-201ENSMUST00000034218 3299 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
NpcdF8VQB8 Cd84-204ENSMUST00000136479 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
NpcdF8VQB8 Olfr522-201ENSMUST00000050585 4766 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
NpcdF8VQB8 Ank3-202ENSMUST00000054167 5769 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
NpcdF8VQB8 Helz2-203ENSMUST00000121484 10063 ntTSL 5 BASIC9.51□□□□□ -0.89
NpcdF8VQB8 Sorbs2-215ENSMUST00000135336 6307 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
NpcdF8VQB8 Gm38697-201ENSMUST00000198061 1746 ntBASIC9.51□□□□□ -0.89
NpcdF8VQB8 Gm4849-201ENSMUST00000188428 2246 ntBASIC9.51□□□□□ -0.89
NpcdF8VQB8 Itgam-205ENSMUST00000120355 3701 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
NpcdF8VQB8 Sox6-206ENSMUST00000205405 2903 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
NpcdF8VQB8 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC9.51□□□□□ -0.89
NpcdF8VQB8 Tmem209-203ENSMUST00000115157 2273 ntAPPRIS ALT1 TSL 1 (best) BASIC9.51□□□□□ -0.89
NpcdF8VQB8 Igkv12-89-201ENSMUST00000103335 335 ntAPPRIS ALT2 BASIC9.51□□□□□ -0.89
NpcdF8VQB8 Gm9378-201ENSMUST00000120315 471 ntBASIC9.51□□□□□ -0.89
NpcdF8VQB8 Gm5135-201ENSMUST00000121100 573 ntBASIC9.51□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms