Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Onecut2-202ENSMUST00000175965 13391 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Gm3234-201ENSMUST00000222644 5061 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Fam19a1-201ENSMUST00000075080 2411 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Ccl20-201ENSMUST00000027351 1417 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Gm4894-202ENSMUST00000216428 2294 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Gm5182-201ENSMUST00000217708 6092 ntBASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Slc4a10-201ENSMUST00000054484 5320 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Tmem175-201ENSMUST00000063272 3956 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 8030451A03Rik-203ENSMUST00000141428 2618 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Gm12219-201ENSMUST00000119198 443 ntBASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Fcor-201ENSMUST00000159364 392 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Gm5181-201ENSMUST00000183140 971 ntBASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Gm38305-201ENSMUST00000194825 223 ntBASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Olfr1348-204ENSMUST00000208066 1135 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Gm30853-201ENSMUST00000218367 810 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 AC154382.1-201ENSMUST00000220958 1282 ntBASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 AC161537.1-202ENSMUST00000228450 868 ntBASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Gm11855-201ENSMUST00000121562 1869 ntBASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 D030045P18Rik-201ENSMUST00000213245 1892 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Cflar-205ENSMUST00000114313 6572 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Spata31d1a-202ENSMUST00000224469 1616 ntBASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Ift122-203ENSMUST00000112925 4122 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Gm37403-201ENSMUST00000193775 3521 ntBASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Eif4e2-202ENSMUST00000076362 3394 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 4833427F10Rik-201ENSMUST00000172874 1475 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Gm37647-201ENSMUST00000194556 3143 ntBASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Gm43534-201ENSMUST00000197685 2853 ntBASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Yes1-202ENSMUST00000168707 2259 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Tgm3-201ENSMUST00000110299 4135 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Dock9-201ENSMUST00000040700 7803 ntAPPRIS P3 TSL 2 BASIC7.29□□□□□ -1.24
Upk3aQ9JKX8 Gm16072-201ENSMUST00000119574 2377 ntBASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Gm10687-201ENSMUST00000180670 3233 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Tars2-203ENSMUST00000098857 3228 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Gm43686-201ENSMUST00000197351 2439 ntBASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Gm42996-201ENSMUST00000196116 1636 ntBASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Gm21056-201ENSMUST00000221636 4635 ntTSL 5 BASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Gm12297-201ENSMUST00000121380 979 ntBASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Gm24647-201ENSMUST00000157112 113 ntBASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Gm20797-201ENSMUST00000177894 383 ntBASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Ets1-205ENSMUST00000184364 678 ntTSL 5 BASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Gm8004-201ENSMUST00000187782 617 ntBASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Gm37729-201ENSMUST00000194761 1172 ntBASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Gm9497-201ENSMUST00000199908 538 ntBASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Gm43226-201ENSMUST00000202438 259 ntBASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Gm19172-201ENSMUST00000203170 1246 ntBASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Gm44643-201ENSMUST00000208542 674 ntTSL 3 BASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 E230032D23Rik-203ENSMUST00000208797 856 ntBASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 AC166822.1-201ENSMUST00000227667 636 ntBASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Olfr984-201ENSMUST00000056795 945 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Rpl27a-ps1-201ENSMUST00000075382 448 ntBASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Rps12-ps3-201ENSMUST00000086764 494 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Gm42692-201ENSMUST00000199482 2833 ntBASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Zc3h11a-201ENSMUST00000027736 4395 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Gm7842-201ENSMUST00000217691 1379 ntBASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Thg1l-202ENSMUST00000109254 2202 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 E330013P04Rik-203ENSMUST00000190698 2996 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
Upk3aQ9JKX8 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC7.28□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms