Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm37729-201ENSMUST00000194761 1172 ntBASIC8.66□□□□□ -1.02
Clp1Q99LI9 Gm43550-201ENSMUST00000200597 303 ntBASIC8.66□□□□□ -1.02
Clp1Q99LI9 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC8.66□□□□□ -1.02
Clp1Q99LI9 Gm45551-201ENSMUST00000211459 928 ntBASIC8.66□□□□□ -1.02
Clp1Q99LI9 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC8.66□□□□□ -1.02
Clp1Q99LI9 AC151971.2-201ENSMUST00000217540 909 ntBASIC8.66□□□□□ -1.02
Clp1Q99LI9 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC8.66□□□□□ -1.02
Clp1Q99LI9 Gm33782-201ENSMUST00000218518 517 ntTSL 3 BASIC8.66□□□□□ -1.02
Clp1Q99LI9 AC162183.1-201ENSMUST00000224843 472 ntBASIC8.66□□□□□ -1.02
Clp1Q99LI9 AC108945.1-201ENSMUST00000226477 94 ntBASIC8.66□□□□□ -1.02
Clp1Q99LI9 AC154484.1-201ENSMUST00000227311 771 ntBASIC8.66□□□□□ -1.02
Clp1Q99LI9 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Clp1Q99LI9 Olfr980-201ENSMUST00000073932 933 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Clp1Q99LI9 Olfr671-201ENSMUST00000078710 942 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
Clp1Q99LI9 Gm25131-201ENSMUST00000082653 151 ntBASIC8.66□□□□□ -1.02
Clp1Q99LI9 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Clp1Q99LI9 BC026762-201ENSMUST00000206555 2503 ntBASIC8.66□□□□□ -1.02
Clp1Q99LI9 AC142266.1-202ENSMUST00000227784 3733 ntBASIC8.66□□□□□ -1.02
Clp1Q99LI9 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC8.66□□□□□ -1.02
Clp1Q99LI9 Gm16050-201ENSMUST00000160626 2363 ntTSL 3 BASIC8.66□□□□□ -1.02
Clp1Q99LI9 Gm35608-201ENSMUST00000218472 2370 ntBASIC8.66□□□□□ -1.02
Clp1Q99LI9 Uhrf1-203ENSMUST00000113038 3483 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Clp1Q99LI9 Rufy3-207ENSMUST00000199312 2182 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Clp1Q99LI9 Zfp827-202ENSMUST00000098614 7581 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Clp1Q99LI9 Gm44812-201ENSMUST00000207627 5349 ntTSL 5 BASIC8.66□□□□□ -1.02
Clp1Q99LI9 Retsat-201ENSMUST00000070597 3027 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Clp1Q99LI9 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Clp1Q99LI9 Pkd1-201ENSMUST00000035565 14164 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Clp1Q99LI9 Gm45718-201ENSMUST00000207577 3794 ntBASIC8.66□□□□□ -1.02
Clp1Q99LI9 Mark3-206ENSMUST00000221459 2807 ntAPPRIS ALT1 TSL 5 BASIC8.66□□□□□ -1.02
Clp1Q99LI9 Hmgb1-201ENSMUST00000085546 2838 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Clp1Q99LI9 Gm37474-201ENSMUST00000194812 1814 ntBASIC8.66□□□□□ -1.02
Clp1Q99LI9 Cyld-205ENSMUST00000209532 7990 ntAPPRIS ALT1 TSL 5 BASIC8.66□□□□□ -1.02
Clp1Q99LI9 Zfp521-201ENSMUST00000025288 6152 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Clp1Q99LI9 Ctnnd1-212ENSMUST00000111686 6061 ntTSL 5 BASIC8.66□□□□□ -1.02
Clp1Q99LI9 Gm7648-201ENSMUST00000173036 1658 ntBASIC8.65□□□□□ -1.02
Clp1Q99LI9 Baalc-201ENSMUST00000163313 2492 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Clp1Q99LI9 Dhrs7b-202ENSMUST00000108718 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Clp1Q99LI9 Cntrl-212ENSMUST00000156933 7189 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Clp1Q99LI9 Gm12295-201ENSMUST00000128453 3189 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Clp1Q99LI9 Gm16421-201ENSMUST00000117616 1557 ntBASIC8.65□□□□□ -1.02
Clp1Q99LI9 Txk-202ENSMUST00000169534 2344 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
Clp1Q99LI9 Vps8-205ENSMUST00000118138 3060 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Clp1Q99LI9 Gm32486-201ENSMUST00000209810 3816 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Clp1Q99LI9 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC8.65□□□□□ -1.02
Clp1Q99LI9 Zp2-201ENSMUST00000033207 2221 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Clp1Q99LI9 Gm29154-211ENSMUST00000213655 1499 ntTSL 5 BASIC8.65□□□□□ -1.02
Clp1Q99LI9 L1td1-202ENSMUST00000154279 2942 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Clp1Q99LI9 Hrh1-204ENSMUST00000161220 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Clp1Q99LI9 Fam135b-201ENSMUST00000022953 4623 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Clp1Q99LI9 Slco1b2-204ENSMUST00000203597 1965 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
Clp1Q99LI9 Rps6ka1-205ENSMUST00000157067 2637 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Clp1Q99LI9 Rfx2-202ENSMUST00000086801 3278 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
Clp1Q99LI9 Gmfg-202ENSMUST00000108289 477 ntTSL 3 BASIC8.65□□□□□ -1.02
Clp1Q99LI9 Gm13731-201ENSMUST00000117332 196 ntBASIC8.65□□□□□ -1.02
Clp1Q99LI9 Gm13915-201ENSMUST00000119314 931 ntBASIC8.65□□□□□ -1.02
Clp1Q99LI9 Gm12993-201ENSMUST00000119900 479 ntBASIC8.65□□□□□ -1.02
Clp1Q99LI9 Gm6798-201ENSMUST00000119961 360 ntBASIC8.65□□□□□ -1.02
Clp1Q99LI9 Gm12202-201ENSMUST00000121196 811 ntBASIC8.65□□□□□ -1.02
Clp1Q99LI9 Gm11910-201ENSMUST00000121624 432 ntBASIC8.65□□□□□ -1.02
Clp1Q99LI9 Gm16407-201ENSMUST00000122134 567 ntBASIC8.65□□□□□ -1.02
Clp1Q99LI9 Fam229b-203ENSMUST00000125042 707 ntTSL 5 BASIC8.65□□□□□ -1.02
Clp1Q99LI9 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC8.65□□□□□ -1.02
Clp1Q99LI9 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Clp1Q99LI9 Fam229b-206ENSMUST00000136546 592 ntAPPRIS P1 TSL 3 BASIC8.65□□□□□ -1.02
Clp1Q99LI9 Fpr2-202ENSMUST00000149944 883 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Clp1Q99LI9 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC8.65□□□□□ -1.02
Clp1Q99LI9 Mup8-202ENSMUST00000163931 986 ntAPPRIS P3 TSL 5 BASIC8.65□□□□□ -1.02
Clp1Q99LI9 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC8.65□□□□□ -1.02
Clp1Q99LI9 Gm21847-201ENSMUST00000178227 1068 ntTSL 5 BASIC8.65□□□□□ -1.02
Clp1Q99LI9 Gm6799-201ENSMUST00000186919 573 ntBASIC8.65□□□□□ -1.02
Clp1Q99LI9 Gm28803-201ENSMUST00000190385 764 ntBASIC8.65□□□□□ -1.02
Clp1Q99LI9 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC8.65□□□□□ -1.02
Clp1Q99LI9 Gm4873-201ENSMUST00000199402 1203 ntBASIC8.65□□□□□ -1.02
Clp1Q99LI9 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC8.65□□□□□ -1.02
Clp1Q99LI9 Gm19056-201ENSMUST00000218220 797 ntBASIC8.65□□□□□ -1.02
Clp1Q99LI9 Ctla2b-201ENSMUST00000021884 842 ntAPPRIS P4 TSL 1 (best) BASIC8.65□□□□□ -1.02
Clp1Q99LI9 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC8.65□□□□□ -1.02
Clp1Q99LI9 AC154250.1-201ENSMUST00000224775 489 ntBASIC8.65□□□□□ -1.02
Clp1Q99LI9 AC158981.3-201ENSMUST00000226844 1024 ntBASIC8.65□□□□□ -1.02
Clp1Q99LI9 Vmn1r41-204ENSMUST00000227039 985 ntBASIC8.65□□□□□ -1.02
Clp1Q99LI9 Mir185-201ENSMUST00000083530 65 ntBASIC8.65□□□□□ -1.02
Clp1Q99LI9 Ube2nl-201ENSMUST00000085228 456 ntBASIC8.65□□□□□ -1.02
Clp1Q99LI9 Myo6-212ENSMUST00000184480 4139 ntTSL 5 BASIC8.65□□□□□ -1.02
Clp1Q99LI9 Phactr4-203ENSMUST00000102568 4614 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Clp1Q99LI9 Casr-201ENSMUST00000063597 4534 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Clp1Q99LI9 Arhgef7-202ENSMUST00000074856 4451 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Clp1Q99LI9 Lnpk-203ENSMUST00000111993 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Clp1Q99LI9 Thsd1-203ENSMUST00000162447 3273 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Clp1Q99LI9 Lhx6-204ENSMUST00000112966 3188 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Clp1Q99LI9 Nqo1-201ENSMUST00000003947 1553 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Clp1Q99LI9 Fgf13-202ENSMUST00000119306 2091 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Clp1Q99LI9 Serpina3n-201ENSMUST00000021506 2064 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Clp1Q99LI9 Adra1a-201ENSMUST00000054661 4137 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Clp1Q99LI9 Sulf1-203ENSMUST00000180062 4636 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Clp1Q99LI9 Gm18701-201ENSMUST00000188281 1536 ntBASIC8.64□□□□□ -1.03
Clp1Q99LI9 Vmn1r180-201ENSMUST00000173816 5060 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Clp1Q99LI9 Utp14a-201ENSMUST00000080713 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Clp1Q99LI9 Slfn5-202ENSMUST00000108157 3007 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Clp1Q99LI9 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms