Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 4921521D15Rik-201ENSMUST00000197578 1927 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Vps53Q8CCB4 Tmem35a-201ENSMUST00000037687 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Vps53Q8CCB4 Gm25725-201ENSMUST00000104528 130 ntBASIC8.96□□□□□ -0.98
Vps53Q8CCB4 Gm7129-201ENSMUST00000117402 997 ntBASIC8.96□□□□□ -0.98
Vps53Q8CCB4 Gm11907-201ENSMUST00000118918 1007 ntBASIC8.96□□□□□ -0.98
Vps53Q8CCB4 Gm13163-201ENSMUST00000119875 336 ntBASIC8.96□□□□□ -0.98
Vps53Q8CCB4 Gm14024-201ENSMUST00000141964 560 ntTSL 2 BASIC8.96□□□□□ -0.98
Vps53Q8CCB4 Gm14319-201ENSMUST00000142937 703 ntTSL 2 BASIC8.96□□□□□ -0.98
Vps53Q8CCB4 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC8.96□□□□□ -0.98
Vps53Q8CCB4 Gm22948-201ENSMUST00000158561 243 ntBASIC8.96□□□□□ -0.98
Vps53Q8CCB4 Gm18191-201ENSMUST00000174624 824 ntBASIC8.96□□□□□ -0.98
Vps53Q8CCB4 Gm26587-201ENSMUST00000180795 989 ntBASIC8.96□□□□□ -0.98
Vps53Q8CCB4 Gm38337-201ENSMUST00000193986 599 ntBASIC8.96□□□□□ -0.98
Vps53Q8CCB4 Trav22-201ENSMUST00000198117 346 ntBASIC8.96□□□□□ -0.98
Vps53Q8CCB4 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC8.96□□□□□ -0.98
Vps53Q8CCB4 Gm43008-201ENSMUST00000202346 286 ntBASIC8.96□□□□□ -0.98
Vps53Q8CCB4 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC8.96□□□□□ -0.98
Vps53Q8CCB4 Gm4977-201ENSMUST00000215709 1262 ntBASIC8.96□□□□□ -0.98
Vps53Q8CCB4 Gm17875-201ENSMUST00000216005 941 ntBASIC8.96□□□□□ -0.98
Vps53Q8CCB4 Akr1c12-201ENSMUST00000021632 1261 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Vps53Q8CCB4 AC165349.2-201ENSMUST00000219097 426 ntBASIC8.96□□□□□ -0.98
Vps53Q8CCB4 AC124450.1-201ENSMUST00000225569 495 ntBASIC8.96□□□□□ -0.98
Vps53Q8CCB4 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC8.96□□□□□ -0.98
Vps53Q8CCB4 Spink10-201ENSMUST00000055725 1113 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Vps53Q8CCB4 Klrc2-201ENSMUST00000071920 1098 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
Vps53Q8CCB4 Olfr51-201ENSMUST00000076514 924 ntAPPRIS P1 BASIC8.96□□□□□ -0.98
Vps53Q8CCB4 Gm25259-201ENSMUST00000083048 193 ntBASIC8.96□□□□□ -0.98
Vps53Q8CCB4 Klrk1-202ENSMUST00000095412 1019 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Vps53Q8CCB4 AC107740.1-201ENSMUST00000216972 2401 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Vps53Q8CCB4 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Vps53Q8CCB4 Tmem209-202ENSMUST00000102991 1718 ntTSL 5 BASIC8.96□□□□□ -0.98
Vps53Q8CCB4 Kif24-202ENSMUST00000108055 5593 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Vps53Q8CCB4 Psg19-201ENSMUST00000004657 2105 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Vps53Q8CCB4 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Vps53Q8CCB4 Fancd2os-201ENSMUST00000035870 1358 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Vps53Q8CCB4 Gm43670-201ENSMUST00000199047 1767 ntBASIC8.96□□□□□ -0.98
Vps53Q8CCB4 Adam2-201ENSMUST00000022618 2551 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Vps53Q8CCB4 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Vps53Q8CCB4 Olfr212-202ENSMUST00000218028 2291 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Vps53Q8CCB4 Pdgfd-201ENSMUST00000058692 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Vps53Q8CCB4 Serpinb1a-201ENSMUST00000076352 1918 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Olfr1006-201ENSMUST00000099917 1529 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Cfap161-202ENSMUST00000119134 2868 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Synj2bp-204ENSMUST00000164431 3305 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Gm37496-201ENSMUST00000191930 2509 ntBASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Gfral-201ENSMUST00000074880 2080 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Gm5402-201ENSMUST00000119588 1618 ntBASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Arpp21-202ENSMUST00000070218 3181 ntTSL 5 BASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Cntn4-206ENSMUST00000113264 5262 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Gm12870-201ENSMUST00000121383 1016 ntBASIC8.95□□□□□ -0.98
Vps53Q8CCB4 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Ttc9c-204ENSMUST00000153281 1192 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Gm15389-201ENSMUST00000153774 666 ntTSL 3 BASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Gm24422-201ENSMUST00000157800 119 ntBASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Gm25372-201ENSMUST00000158161 255 ntBASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Gm7162-201ENSMUST00000161205 1024 ntBASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Gm16573-203ENSMUST00000162231 807 ntTSL 2 BASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Gm15251-201ENSMUST00000177947 883 ntBASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Gm4308-201ENSMUST00000179735 914 ntBASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Gm29290-201ENSMUST00000185385 597 ntTSL 3 BASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Gm32899-201ENSMUST00000219694 207 ntBASIC8.95□□□□□ -0.98
Vps53Q8CCB4 AC132590.1-201ENSMUST00000224374 1164 ntBASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Gm22748-201ENSMUST00000082493 136 ntBASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Olfr650-ps1-201ENSMUST00000121432 2321 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Gm44652-201ENSMUST00000208648 2854 ntBASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Gm44850-201ENSMUST00000205621 1329 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Gm43519-201ENSMUST00000197239 1872 ntBASIC8.95□□□□□ -0.98
Vps53Q8CCB4 AC151984.1-201ENSMUST00000218261 2976 ntBASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Itgb6-203ENSMUST00000112517 3537 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Kcnma1-224ENSMUST00000224077 3537 ntAPPRIS ALT2 BASIC8.95□□□□□ -0.98
Vps53Q8CCB4 4933416E14Rik-202ENSMUST00000137955 1938 ntBASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Gm44834-201ENSMUST00000206671 1396 ntBASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Zfp473-207ENSMUST00000149011 9230 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Gm6249-201ENSMUST00000211142 3314 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Dgkh-204ENSMUST00000227767 3319 ntBASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Vps53Q8CCB4 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Fam216b-201ENSMUST00000066437 2241 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Vps53Q8CCB4 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC8.94□□□□□ -0.98
Vps53Q8CCB4 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC8.94□□□□□ -0.98
Vps53Q8CCB4 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC8.94□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms