Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm43533-201ENSMUST00000202933 2936 ntBASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trub1Q8C0D0 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
Trub1Q8C0D0 4930544G11Rik-201ENSMUST00000043382 1406 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Csnk1g1-204ENSMUST00000130798 1648 ntTSL 5 BASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trub1Q8C0D0 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Gm37915-201ENSMUST00000195134 3261 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Gm43422-201ENSMUST00000199780 3571 ntBASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Gm12361-201ENSMUST00000119806 1044 ntBASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Gm15286-201ENSMUST00000150623 743 ntTSL 3 BASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Gm16034-201ENSMUST00000156446 480 ntTSL 2 BASIC7.78□□□□□ -1.16
Trub1Q8C0D0 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Gm9451-201ENSMUST00000188491 604 ntBASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Gm38063-201ENSMUST00000193990 342 ntBASIC7.78□□□□□ -1.16
Trub1Q8C0D0 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Gm19211-201ENSMUST00000200251 1206 ntBASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Gm42745-201ENSMUST00000200904 193 ntTSL 3 BASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Gm7542-201ENSMUST00000201140 777 ntBASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Gm30196-201ENSMUST00000208957 160 ntBASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Gm4972-201ENSMUST00000211108 1254 ntBASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Thyn1-203ENSMUST00000213770 775 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC7.78□□□□□ -1.16
Trub1Q8C0D0 AC124687.3-201ENSMUST00000222865 875 ntTSL 5 BASIC7.78□□□□□ -1.16
Trub1Q8C0D0 4930542C16Rik-201ENSMUST00000062438 1090 ntTSL 2 BASIC7.78□□□□□ -1.16
Trub1Q8C0D0 4833407H14Rik-201ENSMUST00000180442 1485 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Arhgef9-209ENSMUST00000181987 6222 ntTSL 2 BASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Olfr96-203ENSMUST00000214482 2161 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Sgcz-201ENSMUST00000118896 2389 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Trub1Q8C0D0 AC154270.2-201ENSMUST00000226755 2306 ntBASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Olfr449-204ENSMUST00000214687 1921 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Primpol-206ENSMUST00000209787 1833 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
Trub1Q8C0D0 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
Trub1Q8C0D0 Lingo2-202ENSMUST00000098151 2781 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.16
Trub1Q8C0D0 Ccdc141-202ENSMUST00000049544 8969 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Rps15a-204ENSMUST00000131374 5179 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Gm28157-201ENSMUST00000187675 2165 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Gm29146-201ENSMUST00000188904 2165 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Gm28772-201ENSMUST00000189554 2165 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Gm37547-201ENSMUST00000193277 2165 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trub1Q8C0D0 4931406P16Rik-210ENSMUST00000206399 4158 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Gm24462-201ENSMUST00000102430 106 ntBASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Olfr1019-201ENSMUST00000102634 933 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Gm14891-201ENSMUST00000117378 596 ntBASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Gm12075-201ENSMUST00000117426 397 ntBASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Gm13521-201ENSMUST00000118922 866 ntBASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Defa-ps16-201ENSMUST00000121939 171 ntBASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Gm13465-201ENSMUST00000129687 979 ntTSL 2 BASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Gm11646-201ENSMUST00000135857 397 ntTSL 3 BASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Gm15133-201ENSMUST00000139019 843 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Gm16758-201ENSMUST00000149552 3848 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Gm15339-201ENSMUST00000153577 506 ntTSL 3 BASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Gm23117-201ENSMUST00000158482 108 ntBASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Gm25164-201ENSMUST00000158908 116 ntBASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Gm25082-201ENSMUST00000177296 255 ntBASIC7.77□□□□□ -1.17
Trub1Q8C0D0 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Mir8095-201ENSMUST00000185103 129 ntBASIC7.77□□□□□ -1.17
Trub1Q8C0D0 1700122H20Rik-201ENSMUST00000188950 421 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Gm28239-201ENSMUST00000190225 447 ntBASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Gm43346-201ENSMUST00000198290 685 ntTSL 2 BASIC7.77□□□□□ -1.17
Trub1Q8C0D0 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC7.77□□□□□ -1.17
Trub1Q8C0D0 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Gm5948-201ENSMUST00000219627 839 ntBASIC7.77□□□□□ -1.17
Trub1Q8C0D0 AC154747.4-202ENSMUST00000223826 852 ntBASIC7.77□□□□□ -1.17
Trub1Q8C0D0 AC126939.4-201ENSMUST00000225360 743 ntBASIC7.77□□□□□ -1.17
Trub1Q8C0D0 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Mgat4d-201ENSMUST00000038692 1293 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
Trub1Q8C0D0 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC7.77□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 90.2 ms