Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Cdx4Q07424 Gm6819-201ENSMUST00000185325 1891 ntBASIC6.07□□□□□ -1.44
Cdx4Q07424 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 Olfr1428-202ENSMUST00000208391 1368 ntTSL 3 BASIC6.06□□□□□ -1.44
Cdx4Q07424 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC6.06□□□□□ -1.44
Cdx4Q07424 Khdc1b-201ENSMUST00000147615 2236 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Cdx4Q07424 D930007P13Rik-201ENSMUST00000181306 1324 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 AC166574.1-201ENSMUST00000226916 1309 ntBASIC6.06□□□□□ -1.44
Cdx4Q07424 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm28485-201ENSMUST00000185300 1500 ntTSL 5 BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm28684-201ENSMUST00000185586 1500 ntTSL 5 BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm28422-201ENSMUST00000186112 1500 ntTSL 5 BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm29447-201ENSMUST00000186407 1500 ntTSL 5 BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm29628-201ENSMUST00000187206 1500 ntTSL 5 BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm28316-201ENSMUST00000187576 1500 ntTSL 5 BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm29313-201ENSMUST00000187866 1500 ntTSL 5 BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm28252-201ENSMUST00000188457 1500 ntTSL 5 BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm28950-203ENSMUST00000188826 1500 ntTSL 5 BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm29303-201ENSMUST00000189215 1500 ntTSL 5 BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm28220-201ENSMUST00000189607 1500 ntTSL 5 BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm29342-202ENSMUST00000189689 1500 ntTSL 5 BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm29116-202ENSMUST00000189963 1500 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm29081-203ENSMUST00000190140 1500 ntTSL 5 BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm28726-201ENSMUST00000190994 1500 ntTSL 5 BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm29386-203ENSMUST00000191185 1500 ntTSL 5 BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm33954-202ENSMUST00000195188 1500 ntTSL 5 BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm28547-201ENSMUST00000186357 2167 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm29025-201ENSMUST00000186756 2163 ntTSL 5 BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 Slc18b1-201ENSMUST00000119597 2837 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Cdx4Q07424 Cks1brt-202ENSMUST00000211617 2397 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 Parp11-203ENSMUST00000112193 1725 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 Aqp9-203ENSMUST00000113570 1712 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Cdx4Q07424 Icos-202ENSMUST00000102827 3241 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm10488-201ENSMUST00000101657 874 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm26429-201ENSMUST00000104829 110 ntBASIC6.06□□□□□ -1.44
Cdx4Q07424 Homer1-210ENSMUST00000109497 779 ntTSL 5 BASIC6.06□□□□□ -1.44
Cdx4Q07424 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC6.06□□□□□ -1.44
Cdx4Q07424 Tfpi-207ENSMUST00000111722 1232 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm5530-201ENSMUST00000117185 985 ntBASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm13750-201ENSMUST00000117621 465 ntBASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm14099-201ENSMUST00000117769 605 ntBASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm12310-201ENSMUST00000118013 492 ntBASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm10651-201ENSMUST00000118212 609 ntBASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm12604-201ENSMUST00000118382 380 ntBASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm12455-201ENSMUST00000121242 416 ntBASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm11722-201ENSMUST00000138702 534 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm13269-201ENSMUST00000143458 655 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm11730-202ENSMUST00000147186 753 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm16540-201ENSMUST00000160263 426 ntTSL 5 BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm6121-202ENSMUST00000167438 893 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm17235-201ENSMUST00000169128 964 ntBASIC6.06□□□□□ -1.44
Cdx4Q07424 Csnk2b-203ENSMUST00000173114 917 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm5350-201ENSMUST00000182057 1002 ntBASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm27209-201ENSMUST00000183834 898 ntTSL 3 BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm18697-201ENSMUST00000191179 2126 ntBASIC6.06□□□□□ -1.44
Cdx4Q07424 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm6522-201ENSMUST00000197160 1203 ntBASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm6590-201ENSMUST00000203343 687 ntBASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm44785-202ENSMUST00000208294 932 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 Olfr664-202ENSMUST00000211596 921 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm46313-201ENSMUST00000220463 547 ntBASIC6.06□□□□□ -1.44
Cdx4Q07424 AC158142.3-201ENSMUST00000226230 675 ntBASIC6.06□□□□□ -1.44
Cdx4Q07424 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
Cdx4Q07424 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 4930556J24Rik-201ENSMUST00000042344 1220 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 Lrp1-201ENSMUST00000049149 14888 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm5514-201ENSMUST00000060477 306 ntBASIC6.06□□□□□ -1.44
Cdx4Q07424 Rnase2a-201ENSMUST00000061936 690 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 2700046A07Rik-202ENSMUST00000067450 2101 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 Iba57-202ENSMUST00000069631 864 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 Klk1b8-201ENSMUST00000072204 859 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 Boll-201ENSMUST00000087585 882 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Cdx4Q07424 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Cdx4Q07424 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 Gm20775-201ENSMUST00000100115 1851 ntBASIC6.06□□□□□ -1.44
Cdx4Q07424 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 Olfr1346-203ENSMUST00000215302 4525 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Cdx4Q07424 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Cdx4Q07424 Spef2-205ENSMUST00000162780 1639 ntTSL 5 BASIC6.06□□□□□ -1.44
Cdx4Q07424 Fam216b-201ENSMUST00000066437 2241 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 115.7 ms