Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm21886-201ENSMUST00000178391 645 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Hmgb1P63158 Cbx3-ps6-201ENSMUST00000181108 552 ntBASIC8.69□□□□□ -1.02
Hmgb1P63158 Gm19124-201ENSMUST00000191041 832 ntBASIC8.69□□□□□ -1.02
Hmgb1P63158 Prkar2a-206ENSMUST00000195405 1143 ntTSL 5 BASIC8.69□□□□□ -1.02
Hmgb1P63158 Gm42464-201ENSMUST00000196717 417 ntBASIC8.69□□□□□ -1.02
Hmgb1P63158 Gm43464-201ENSMUST00000198003 317 ntTSL 3 BASIC8.69□□□□□ -1.02
Hmgb1P63158 Gm43310-201ENSMUST00000198975 820 ntBASIC8.69□□□□□ -1.02
Hmgb1P63158 Gm34701-201ENSMUST00000204213 849 ntBASIC8.69□□□□□ -1.02
Hmgb1P63158 Tmem147-206ENSMUST00000208169 537 ntTSL 5 BASIC8.69□□□□□ -1.02
Hmgb1P63158 Gm19196-201ENSMUST00000209258 357 ntBASIC8.69□□□□□ -1.02
Hmgb1P63158 Gm45789-201ENSMUST00000213038 364 ntBASIC8.69□□□□□ -1.02
Hmgb1P63158 A930040O22Rik-201ENSMUST00000221662 973 ntBASIC8.69□□□□□ -1.02
Hmgb1P63158 Gm18362-201ENSMUST00000221786 529 ntBASIC8.69□□□□□ -1.02
Hmgb1P63158 Thyn1-201ENSMUST00000039161 918 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hmgb1P63158 Mettl21c-201ENSMUST00000061421 1086 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hmgb1P63158 Gm4822-201ENSMUST00000077551 479 ntBASIC8.69□□□□□ -1.02
Hmgb1P63158 Olfr192-201ENSMUST00000080251 925 ntBASIC8.69□□□□□ -1.02
Hmgb1P63158 Cbx3-ps7-201ENSMUST00000081455 552 ntBASIC8.69□□□□□ -1.02
Hmgb1P63158 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hmgb1P63158 Dyrk1a-201ENSMUST00000023614 5754 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Hmgb1P63158 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Hmgb1P63158 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Hmgb1P63158 Flrt3-202ENSMUST00000110057 3977 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hmgb1P63158 A2ml1-201ENSMUST00000060574 4695 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hmgb1P63158 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Hmgb1P63158 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC8.69□□□□□ -1.02
Hmgb1P63158 AC159301.1-202ENSMUST00000225860 2133 ntBASIC8.69□□□□□ -1.02
Hmgb1P63158 Ccdc83-202ENSMUST00000107220 1408 ntAPPRIS ALT2 TSL 2 BASIC8.69□□□□□ -1.02
Hmgb1P63158 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hmgb1P63158 Ccdc39-201ENSMUST00000029222 3606 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hmgb1P63158 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hmgb1P63158 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hmgb1P63158 Phc3-206ENSMUST00000129817 3019 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hmgb1P63158 Sult1c1-201ENSMUST00000024738 1556 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hmgb1P63158 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hmgb1P63158 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hmgb1P63158 Meis1-208ENSMUST00000177417 5308 ntTSL 5 BASIC8.68□□□□□ -1.02
Hmgb1P63158 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC8.68□□□□□ -1.02
Hmgb1P63158 Zfp846-202ENSMUST00000115557 12974 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Hmgb1P63158 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Hmgb1P63158 1500026H17Rik-201ENSMUST00000181598 3027 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Hmgb1P63158 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Hmgb1P63158 Psg19-201ENSMUST00000004657 2105 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Hmgb1P63158 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Hmgb1P63158 Tdrkh-202ENSMUST00000166032 5692 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Hmgb1P63158 Olfr212-202ENSMUST00000218028 2291 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Hmgb1P63158 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Hmgb1P63158 Myl1-202ENSMUST00000119429 803 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Hmgb1P63158 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC8.68□□□□□ -1.02
Hmgb1P63158 Gm14061-201ENSMUST00000155923 1007 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Hmgb1P63158 Gm16552-201ENSMUST00000162348 685 ntTSL 3 BASIC8.68□□□□□ -1.02
Hmgb1P63158 Arpp19-207ENSMUST00000169188 216 ntTSL 5 BASIC8.68□□□□□ -1.02
Hmgb1P63158 Gm20406-201ENSMUST00000173993 423 ntTSL 3 BASIC8.68□□□□□ -1.02
Hmgb1P63158 Vmn2r-ps52-201ENSMUST00000176211 612 ntBASIC8.68□□□□□ -1.02
Hmgb1P63158 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC8.68□□□□□ -1.02
Hmgb1P63158 AV026068-210ENSMUST00000189169 877 ntTSL 5 BASIC8.68□□□□□ -1.02
Hmgb1P63158 Gm29517-201ENSMUST00000190744 351 ntBASIC8.68□□□□□ -1.02
Hmgb1P63158 Scgb1b9-ps-201ENSMUST00000191567 266 ntBASIC8.68□□□□□ -1.02
Hmgb1P63158 Gm37623-201ENSMUST00000193691 803 ntTSL 3 BASIC8.68□□□□□ -1.02
Hmgb1P63158 4930557J02Rik-201ENSMUST00000202325 1075 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Hmgb1P63158 Gm8686-201ENSMUST00000203028 388 ntBASIC8.68□□□□□ -1.02
Hmgb1P63158 Ndufa4-203ENSMUST00000204084 409 ntTSL 3 BASIC8.68□□□□□ -1.02
Hmgb1P63158 Gm30771-201ENSMUST00000205683 737 ntTSL 3 BASIC8.68□□□□□ -1.02
Hmgb1P63158 Gm44785-202ENSMUST00000208294 932 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Hmgb1P63158 Olfr471-201ENSMUST00000210091 936 ntBASIC8.68□□□□□ -1.02
Hmgb1P63158 Msra-204ENSMUST00000210363 1042 ntTSL 5 BASIC8.68□□□□□ -1.02
Hmgb1P63158 Gm45408-201ENSMUST00000211080 390 ntTSL 5 BASIC8.68□□□□□ -1.02
Hmgb1P63158 Gm45842-201ENSMUST00000211876 753 ntTSL 3 BASIC8.68□□□□□ -1.02
Hmgb1P63158 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Hmgb1P63158 AC159886.1-201ENSMUST00000217099 1091 ntBASIC8.68□□□□□ -1.02
Hmgb1P63158 Gm4178-201ENSMUST00000218307 649 ntBASIC8.68□□□□□ -1.02
Hmgb1P63158 Olfr371-202ENSMUST00000218663 1162 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Hmgb1P63158 AC167364.2-201ENSMUST00000221226 1037 ntTSL 5 BASIC8.68□□□□□ -1.02
Hmgb1P63158 AC123920.1-201ENSMUST00000221449 384 ntBASIC8.68□□□□□ -1.02
Hmgb1P63158 AC129975.2-201ENSMUST00000223705 775 ntBASIC8.68□□□□□ -1.02
Hmgb1P63158 AV026068-219ENSMUST00000224148 933 ntBASIC8.68□□□□□ -1.02
Hmgb1P63158 AV026068-224ENSMUST00000224827 928 ntBASIC8.68□□□□□ -1.02
Hmgb1P63158 Tssk4-206ENSMUST00000228041 1217 ntBASIC8.68□□□□□ -1.02
Hmgb1P63158 Plac8-201ENSMUST00000031264 744 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Hmgb1P63158 Gm8623-201ENSMUST00000071573 436 ntBASIC8.68□□□□□ -1.02
Hmgb1P63158 Rnase1-201ENSMUST00000080126 992 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Hmgb1P63158 Cst7-201ENSMUST00000089200 986 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Hmgb1P63158 Mir486-201ENSMUST00000093576 128 ntBASIC8.68□□□□□ -1.02
Hmgb1P63158 Cd226-202ENSMUST00000097496 911 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Hmgb1P63158 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Hmgb1P63158 Fancd2os-201ENSMUST00000035870 1358 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Hmgb1P63158 Gm44863-201ENSMUST00000207613 1422 ntBASIC8.68□□□□□ -1.02
Hmgb1P63158 Tex28-201ENSMUST00000078060 1420 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Hmgb1P63158 Gm17101-201ENSMUST00000169520 1588 ntBASIC8.68□□□□□ -1.02
Hmgb1P63158 Schip1-207ENSMUST00000182997 1557 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Hmgb1P63158 Sept14-203ENSMUST00000182386 1642 ntAPPRIS P2 TSL 5 BASIC8.68□□□□□ -1.02
Hmgb1P63158 Gm18493-201ENSMUST00000192084 1612 ntBASIC8.68□□□□□ -1.02
Hmgb1P63158 Gm42508-201ENSMUST00000199972 3292 ntBASIC8.68□□□□□ -1.02
Hmgb1P63158 Igsf1-203ENSMUST00000114891 1761 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Hmgb1P63158 Gm38331-201ENSMUST00000195719 2671 ntBASIC8.67□□□□□ -1.02
Hmgb1P63158 Gm37525-201ENSMUST00000193499 2871 ntBASIC8.67□□□□□ -1.02
Hmgb1P63158 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hmgb1P63158 Gm44752-201ENSMUST00000207140 3305 ntBASIC8.67□□□□□ -1.02
Hmgb1P63158 Med12-201ENSMUST00000087948 6809 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.02
Hmgb1P63158 Gm45056-201ENSMUST00000208140 3462 ntTSL 5 BASIC8.67□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms