Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Clasp2-202ENSMUST00000163895 4112 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
NcanP55066 Pde10a-201ENSMUST00000024647 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
NcanP55066 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NcanP55066 Tdrd3-205ENSMUST00000170865 2530 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
NcanP55066 Sec23ip-201ENSMUST00000042942 4505 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NcanP55066 Tnfrsf19-202ENSMUST00000111236 3958 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
NcanP55066 Gm36993-201ENSMUST00000192983 2980 ntBASIC8.13□□□□□ -1.11
NcanP55066 Helz2-201ENSMUST00000094203 9162 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
NcanP55066 Cacna1d-202ENSMUST00000112250 8688 ntAPPRIS P4 TSL 1 (best) BASIC8.13□□□□□ -1.11
NcanP55066 Mtor-202ENSMUST00000103221 8564 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NcanP55066 Itgam-201ENSMUST00000064821 4682 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
NcanP55066 Gdpgp1-201ENSMUST00000062915 4189 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NcanP55066 Cyp24a1-201ENSMUST00000038824 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NcanP55066 Mapk9-203ENSMUST00000102778 4447 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NcanP55066 Tagap-201ENSMUST00000036370 3076 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NcanP55066 Myo15-201ENSMUST00000071880 11769 ntAPPRIS P4 TSL 5 BASIC8.13□□□□□ -1.11
NcanP55066 Vgll1-203ENSMUST00000114746 2151 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NcanP55066 Dip2b-201ENSMUST00000023768 4323 ntTSL 5 BASIC8.13□□□□□ -1.11
NcanP55066 B130021K23Rik-201ENSMUST00000205226 2593 ntBASIC8.13□□□□□ -1.11
NcanP55066 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NcanP55066 Gm15644-201ENSMUST00000121764 387 ntBASIC8.13□□□□□ -1.11
NcanP55066 Gm12175-201ENSMUST00000122081 345 ntBASIC8.13□□□□□ -1.11
NcanP55066 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NcanP55066 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NcanP55066 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NcanP55066 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC8.13□□□□□ -1.11
NcanP55066 Gm10364-202ENSMUST00000153034 1001 ntBASIC8.13□□□□□ -1.11
NcanP55066 Gm8609-201ENSMUST00000182967 998 ntBASIC8.13□□□□□ -1.11
NcanP55066 Gm10136-201ENSMUST00000183196 435 ntBASIC8.13□□□□□ -1.11
NcanP55066 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC8.13□□□□□ -1.11
NcanP55066 Gm7412-201ENSMUST00000191692 605 ntBASIC8.13□□□□□ -1.11
NcanP55066 Gm36928-201ENSMUST00000192466 694 ntBASIC8.13□□□□□ -1.11
NcanP55066 Gm37325-201ENSMUST00000194971 694 ntBASIC8.13□□□□□ -1.11
NcanP55066 Ighv8-3-201ENSMUST00000194985 295 ntBASIC8.13□□□□□ -1.11
NcanP55066 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC8.13□□□□□ -1.11
NcanP55066 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
NcanP55066 Gm5831-201ENSMUST00000216016 1209 ntBASIC8.13□□□□□ -1.11
NcanP55066 4930401C15Rik-201ENSMUST00000218300 865 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NcanP55066 Gm17611-202ENSMUST00000220613 814 ntBASIC8.13□□□□□ -1.11
NcanP55066 Gm5791-201ENSMUST00000220840 489 ntBASIC8.13□□□□□ -1.11
NcanP55066 AC174797.2-203ENSMUST00000224017 716 ntBASIC8.13□□□□□ -1.11
NcanP55066 AC167013.4-201ENSMUST00000226712 317 ntBASIC8.13□□□□□ -1.11
NcanP55066 Insig2-202ENSMUST00000071064 1292 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NcanP55066 Gm5528-201ENSMUST00000076314 480 ntBASIC8.13□□□□□ -1.11
NcanP55066 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NcanP55066 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC8.13□□□□□ -1.11
NcanP55066 Lyn-202ENSMUST00000103010 3387 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
NcanP55066 Baz2a-203ENSMUST00000217851 8385 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
NcanP55066 Mroh2a-201ENSMUST00000061013 7526 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
NcanP55066 AC136986.2-201ENSMUST00000220880 2944 ntBASIC8.13□□□□□ -1.11
NcanP55066 Cul2-201ENSMUST00000025073 3727 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NcanP55066 Magi2-215ENSMUST00000208219 3266 ntTSL 5 BASIC8.13□□□□□ -1.11
NcanP55066 Tecpr2-202ENSMUST00000169597 7780 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NcanP55066 Sltm-201ENSMUST00000049263 3691 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
NcanP55066 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
NcanP55066 Slc12a8-205ENSMUST00000122314 2819 ntTSL 5 BASIC8.13□□□□□ -1.11
NcanP55066 Sec16b-201ENSMUST00000027881 4414 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NcanP55066 Pcyt1a-201ENSMUST00000079791 4789 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NcanP55066 Csf3r-201ENSMUST00000030673 3160 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
NcanP55066 AC154634.1-201ENSMUST00000225225 2394 ntBASIC8.13□□□□□ -1.11
NcanP55066 AC163342.1-201ENSMUST00000216533 2718 ntTSL 5 BASIC8.13□□□□□ -1.11
NcanP55066 Adam3-201ENSMUST00000033958 2743 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NcanP55066 Gm42822-201ENSMUST00000200507 1529 ntBASIC8.13□□□□□ -1.11
NcanP55066 Napepld-201ENSMUST00000060899 3724 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NcanP55066 Kif18b-201ENSMUST00000021311 3326 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NcanP55066 Scfd2-201ENSMUST00000072857 3672 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NcanP55066 Gm13762-202ENSMUST00000168169 2180 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
NcanP55066 Gm30340-201ENSMUST00000191898 2198 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NcanP55066 Olfr1276-203ENSMUST00000218065 5052 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
NcanP55066 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
NcanP55066 Ptprb-201ENSMUST00000092167 11911 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
NcanP55066 Prokr2-202ENSMUST00000110156 3829 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
NcanP55066 Atp2a1-201ENSMUST00000032974 3477 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NcanP55066 Tfcp2l1-201ENSMUST00000027629 9269 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NcanP55066 4930524O08Rik-202ENSMUST00000184444 2719 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NcanP55066 Brip1os-201ENSMUST00000128960 4423 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NcanP55066 Rims2-201ENSMUST00000042917 4719 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
NcanP55066 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NcanP55066 Lipa-202ENSMUST00000178114 2965 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NcanP55066 Cep83os-201ENSMUST00000181906 6566 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NcanP55066 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC8.12□□□□□ -1.11
NcanP55066 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
NcanP55066 Gm13229-201ENSMUST00000118238 340 ntBASIC8.12□□□□□ -1.11
NcanP55066 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC8.12□□□□□ -1.11
NcanP55066 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NcanP55066 1500004A13Rik-207ENSMUST00000184640 610 ntTSL 3 BASIC8.12□□□□□ -1.11
NcanP55066 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC8.12□□□□□ -1.11
NcanP55066 Gm7341-201ENSMUST00000192183 926 ntBASIC8.12□□□□□ -1.11
NcanP55066 Txndc9-203ENSMUST00000192960 472 ntTSL 3 BASIC8.12□□□□□ -1.11
NcanP55066 Gm37070-201ENSMUST00000193272 460 ntBASIC8.12□□□□□ -1.11
NcanP55066 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC8.12□□□□□ -1.11
NcanP55066 Gm31897-202ENSMUST00000206231 604 ntTSL 3 BASIC8.12□□□□□ -1.11
NcanP55066 Usf2-ps1-201ENSMUST00000206657 311 ntBASIC8.12□□□□□ -1.11
NcanP55066 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC8.12□□□□□ -1.11
NcanP55066 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC8.12□□□□□ -1.11
NcanP55066 Cwc15-201ENSMUST00000004200 1111 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NcanP55066 Defb42-201ENSMUST00000067990 618 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NcanP55066 Gm22351-201ENSMUST00000083925 107 ntBASIC8.12□□□□□ -1.11
NcanP55066 Olfr484-202ENSMUST00000214722 4676 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
NcanP55066 Acsl1-203ENSMUST00000110372 3429 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms