Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Col18a1P39061 Dst-205ENSMUST00000182314 2643 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Col18a1P39061 Pde10a-201ENSMUST00000024647 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col18a1P39061 Ptbp2-207ENSMUST00000197464 1742 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Col18a1P39061 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC9.92□□□□□ -0.82
Col18a1P39061 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col18a1P39061 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col18a1P39061 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Col18a1P39061 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Col18a1P39061 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Col18a1P39061 Ppp4r1l-ps-205ENSMUST00000141051 4466 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Col18a1P39061 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Col18a1P39061 4930546K05Rik-202ENSMUST00000216586 3539 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Col18a1P39061 Gm28649-201ENSMUST00000189153 1581 ntBASIC9.91□□□□□ -0.82
Col18a1P39061 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col18a1P39061 Zhx1-203ENSMUST00000175805 4839 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Col18a1P39061 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col18a1P39061 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Col18a1P39061 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Col18a1P39061 Gm23968-201ENSMUST00000175047 125 ntBASIC9.91□□□□□ -0.82
Col18a1P39061 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC9.91□□□□□ -0.82
Col18a1P39061 n-R5s109-201ENSMUST00000179195 119 ntBASIC9.91□□□□□ -0.82
Col18a1P39061 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC9.91□□□□□ -0.82
Col18a1P39061 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC9.91□□□□□ -0.82
Col18a1P39061 Mir6403-201ENSMUST00000185007 129 ntBASIC9.91□□□□□ -0.82
Col18a1P39061 Gm17895-201ENSMUST00000194028 874 ntBASIC9.91□□□□□ -0.82
Col18a1P39061 Gm43501-201ENSMUST00000202513 107 ntBASIC9.91□□□□□ -0.82
Col18a1P39061 Gm44221-201ENSMUST00000203552 388 ntBASIC9.91□□□□□ -0.82
Col18a1P39061 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC9.91□□□□□ -0.82
Col18a1P39061 Gm44861-201ENSMUST00000208325 1220 ntBASIC9.91□□□□□ -0.82
Col18a1P39061 Gm44561-201ENSMUST00000208869 264 ntBASIC9.91□□□□□ -0.82
Col18a1P39061 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC9.91□□□□□ -0.82
Col18a1P39061 AC124778.1-201ENSMUST00000216013 162 ntBASIC9.91□□□□□ -0.82
Col18a1P39061 Gm17917-201ENSMUST00000218561 953 ntBASIC9.91□□□□□ -0.82
Col18a1P39061 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col18a1P39061 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col18a1P39061 Klrc2-201ENSMUST00000071920 1098 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Col18a1P39061 St5-202ENSMUST00000079282 4255 ntAPPRIS P4 TSL 5 BASIC9.91□□□□□ -0.82
Col18a1P39061 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col18a1P39061 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Col18a1P39061 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC9.91□□□□□ -0.82
Col18a1P39061 Ddx46-203ENSMUST00000223736 5612 ntAPPRIS P2 BASIC9.91□□□□□ -0.82
Col18a1P39061 Gpkow-201ENSMUST00000049896 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col18a1P39061 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Col18a1P39061 Kalrn-212ENSMUST00000114973 5253 ntTSL 5 BASIC9.91□□□□□ -0.82
Col18a1P39061 Gm13110-201ENSMUST00000138077 3414 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Col18a1P39061 Gm34121-201ENSMUST00000206188 1490 ntTSL 5 BASIC9.91□□□□□ -0.82
Col18a1P39061 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Col18a1P39061 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col18a1P39061 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col18a1P39061 B4galnt3-201ENSMUST00000057283 3677 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col18a1P39061 Tbc1d24-216ENSMUST00000202925 4216 ntTSL 5 BASIC9.91□□□□□ -0.82
Col18a1P39061 Slc2a5-201ENSMUST00000030826 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col18a1P39061 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Col18a1P39061 Gm5402-201ENSMUST00000119588 1618 ntBASIC9.91□□□□□ -0.82
Col18a1P39061 Cd22-201ENSMUST00000019248 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col18a1P39061 Poln-201ENSMUST00000042954 2897 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col18a1P39061 Gm11298-201ENSMUST00000120503 1799 ntBASIC9.91□□□□□ -0.82
Col18a1P39061 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col18a1P39061 Gm15048-201ENSMUST00000118201 954 ntBASIC9.91□□□□□ -0.82
Col18a1P39061 Gm12506-201ENSMUST00000123620 806 ntTSL 5 BASIC9.91□□□□□ -0.82
Col18a1P39061 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Col18a1P39061 Gm5125-201ENSMUST00000148614 624 ntBASIC9.91□□□□□ -0.82
Col18a1P39061 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC9.91□□□□□ -0.82
Col18a1P39061 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Col18a1P39061 Obox3-ps1-201ENSMUST00000176885 995 ntBASIC9.91□□□□□ -0.82
Col18a1P39061 Gm29107-201ENSMUST00000190910 347 ntBASIC9.91□□□□□ -0.82
Col18a1P39061 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Col18a1P39061 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Col18a1P39061 Gm25133-201ENSMUST00000082647 130 ntBASIC9.91□□□□□ -0.82
Col18a1P39061 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col18a1P39061 Gm43612-201ENSMUST00000196087 3207 ntBASIC9.91□□□□□ -0.82
Col18a1P39061 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Col18a1P39061 Slc12a6-204ENSMUST00000110991 4556 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Col18a1P39061 Gm37372-201ENSMUST00000193577 3311 ntBASIC9.9□□□□□ -0.82
Col18a1P39061 Col6a1-201ENSMUST00000001147 4100 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Col18a1P39061 Fto-201ENSMUST00000069718 3564 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Col18a1P39061 AC158779.1-201ENSMUST00000228912 3861 ntBASIC9.9□□□□□ -0.82
Col18a1P39061 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Col18a1P39061 Gm38187-201ENSMUST00000195609 4709 ntBASIC9.9□□□□□ -0.82
Col18a1P39061 Ttc21a-201ENSMUST00000035100 4182 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Col18a1P39061 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Col18a1P39061 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Col18a1P39061 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Col18a1P39061 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Col18a1P39061 Gm44802-201ENSMUST00000208026 1916 ntBASIC9.9□□□□□ -0.82
Col18a1P39061 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Col18a1P39061 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Col18a1P39061 Il6st-203ENSMUST00000183663 8678 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Col18a1P39061 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Col18a1P39061 Gm11879-201ENSMUST00000121885 702 ntBASIC9.9□□□□□ -0.82
Col18a1P39061 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC9.9□□□□□ -0.82
Col18a1P39061 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC9.9□□□□□ -0.82
Col18a1P39061 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.82
Col18a1P39061 Ighv1-27-201ENSMUST00000194473 340 ntBASIC9.9□□□□□ -0.82
Col18a1P39061 Gm4556-201ENSMUST00000217808 355 ntBASIC9.9□□□□□ -0.82
Col18a1P39061 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC9.9□□□□□ -0.82
Col18a1P39061 AC104906.1-201ENSMUST00000218122 913 ntBASIC9.9□□□□□ -0.82
Col18a1P39061 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC9.9□□□□□ -0.82
Col18a1P39061 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC9.9□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms