Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 n-R5s28-201ENSMUST00000082814 119 ntBASIC6.22□□□□□ -1.41
Cdx1P18111 Gm16026-201ENSMUST00000094774 580 ntBASIC6.22□□□□□ -1.41
Cdx1P18111 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Cdx1P18111 Gm36981-201ENSMUST00000192340 4485 ntBASIC6.22□□□□□ -1.41
Cdx1P18111 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Cdx1P18111 Dnah5-201ENSMUST00000067048 15637 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Cdx1P18111 Nrg4-213ENSMUST00000164721 1927 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Cdx1P18111 Pde1c-202ENSMUST00000114327 6821 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx1P18111 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx1P18111 C87977-202ENSMUST00000105754 1407 ntAPPRIS ALT2 TSL 3 BASIC6.22□□□□□ -1.41
Cdx1P18111 1810018F18Rik-202ENSMUST00000189546 1447 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx1P18111 Gm45832-201ENSMUST00000212762 1443 ntBASIC6.22□□□□□ -1.41
Cdx1P18111 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Cdx1P18111 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx1P18111 AC132467.1-201ENSMUST00000226498 1845 ntBASIC6.22□□□□□ -1.41
Cdx1P18111 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx1P18111 Gm28379-202ENSMUST00000187676 2896 ntBASIC6.22□□□□□ -1.41
Cdx1P18111 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx1P18111 Olfr455-202ENSMUST00000217978 4054 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Cdx1P18111 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Cdx1P18111 Gm42995-201ENSMUST00000197047 1330 ntBASIC6.22□□□□□ -1.41
Cdx1P18111 Zfp939-201ENSMUST00000061201 2131 ntBASIC6.22□□□□□ -1.41
Cdx1P18111 AC122346.1-201ENSMUST00000225266 3732 ntBASIC6.22□□□□□ -1.41
Cdx1P18111 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Cdx1P18111 Rab7b-202ENSMUST00000064679 4498 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Cdx1P18111 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.41
Cdx1P18111 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Cdx1P18111 Gm37548-201ENSMUST00000194519 3814 ntBASIC6.21□□□□□ -1.41
Cdx1P18111 Ttc41-202ENSMUST00000075632 4366 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.41
Cdx1P18111 Gm36251-201ENSMUST00000213712 1914 ntTSL 5 BASIC6.21□□□□□ -1.41
Cdx1P18111 H2-M10.5-201ENSMUST00000041531 1383 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Cdx1P18111 Zfp607b-201ENSMUST00000076421 1947 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
Cdx1P18111 Srp54a-201ENSMUST00000021407 1515 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Cdx1P18111 Adam5-202ENSMUST00000118419 2791 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx1P18111 Gm9894-201ENSMUST00000171257 2904 ntBASIC6.21□□□□□ -1.42
Cdx1P18111 Gm42898-201ENSMUST00000200370 3073 ntBASIC6.21□□□□□ -1.42
Cdx1P18111 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx1P18111 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx1P18111 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx1P18111 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx1P18111 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
Cdx1P18111 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx1P18111 Zscan22-202ENSMUST00000117189 2995 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx1P18111 Gm8802-201ENSMUST00000118633 740 ntBASIC6.21□□□□□ -1.42
Cdx1P18111 Gm12959-201ENSMUST00000119396 403 ntBASIC6.21□□□□□ -1.42
Cdx1P18111 Gm378-201ENSMUST00000120797 820 ntBASIC6.21□□□□□ -1.42
Cdx1P18111 Gm12064-201ENSMUST00000133819 533 ntTSL 3 BASIC6.21□□□□□ -1.42
Cdx1P18111 Gm19840-201ENSMUST00000169624 882 ntBASIC6.21□□□□□ -1.42
Cdx1P18111 Gm6695-201ENSMUST00000177264 1172 ntBASIC6.21□□□□□ -1.42
Cdx1P18111 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx1P18111 Mir7011-201ENSMUST00000183768 73 ntBASIC6.21□□□□□ -1.42
Cdx1P18111 Mir6415-201ENSMUST00000184064 100 ntBASIC6.21□□□□□ -1.42
Cdx1P18111 Gm27197-201ENSMUST00000184325 479 ntTSL 3 BASIC6.21□□□□□ -1.42
Cdx1P18111 Gm28983-201ENSMUST00000186685 614 ntBASIC6.21□□□□□ -1.42
Cdx1P18111 Gm28150-201ENSMUST00000187305 614 ntBASIC6.21□□□□□ -1.42
Cdx1P18111 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx1P18111 Gm28377-201ENSMUST00000189695 720 ntBASIC6.21□□□□□ -1.42
Cdx1P18111 Sh2d1a-207ENSMUST00000189753 1223 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Cdx1P18111 Gm6123-201ENSMUST00000193658 1069 ntBASIC6.21□□□□□ -1.42
Cdx1P18111 Gm5717-201ENSMUST00000198243 1062 ntBASIC6.21□□□□□ -1.42
Cdx1P18111 Gm20223-201ENSMUST00000199932 805 ntBASIC6.21□□□□□ -1.42
Cdx1P18111 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx1P18111 Gm5723-201ENSMUST00000203096 432 ntBASIC6.21□□□□□ -1.42
Cdx1P18111 Gm31579-201ENSMUST00000203306 966 ntBASIC6.21□□□□□ -1.42
Cdx1P18111 4930557K07Rik-201ENSMUST00000205110 363 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx1P18111 Gm45625-201ENSMUST00000209412 650 ntTSL 5 BASIC6.21□□□□□ -1.42
Cdx1P18111 Gm2649-201ENSMUST00000218825 610 ntBASIC6.21□□□□□ -1.42
Cdx1P18111 Gm35514-201ENSMUST00000221615 352 ntTSL 5 BASIC6.21□□□□□ -1.42
Cdx1P18111 CT009539.1-201ENSMUST00000226465 220 ntBASIC6.21□□□□□ -1.42
Cdx1P18111 Hist1h1t-201ENSMUST00000041052 912 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Cdx1P18111 Olfr38-201ENSMUST00000074499 954 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Cdx1P18111 Olfr514-201ENSMUST00000084754 933 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Cdx1P18111 Arhgef12-201ENSMUST00000072767 10059 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx1P18111 Trmt2b-203ENSMUST00000113252 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx1P18111 Tmem209-203ENSMUST00000115157 2273 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx1P18111 Gm45786-201ENSMUST00000213021 2278 ntBASIC6.21□□□□□ -1.42
Cdx1P18111 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Cdx1P18111 Lonp2-202ENSMUST00000121673 1550 ntTSL 5 BASIC6.21□□□□□ -1.42
Cdx1P18111 Gm19028-201ENSMUST00000189614 1873 ntBASIC6.21□□□□□ -1.42
Cdx1P18111 Olfr467-202ENSMUST00000208563 1852 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Cdx1P18111 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx1P18111 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx1P18111 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Cdx1P18111 1600012P17Rik-201ENSMUST00000062159 2475 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx1P18111 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx1P18111 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx1P18111 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx1P18111 Gm38276-201ENSMUST00000192446 1343 ntBASIC6.21□□□□□ -1.42
Cdx1P18111 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx1P18111 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx1P18111 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx1P18111 Vmn1r30-202ENSMUST00000226334 1946 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Cdx1P18111 Gm16487-201ENSMUST00000105048 4037 ntBASIC6.21□□□□□ -1.42
Cdx1P18111 Tgs1-201ENSMUST00000052712 4327 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx1P18111 Nxpe4-202ENSMUST00000215780 2875 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx1P18111 Zcwpw2-201ENSMUST00000111769 1505 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx1P18111 1700074P13Rik-202ENSMUST00000122181 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx1P18111 AC161117.1-201ENSMUST00000221366 1529 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx1P18111 Tm4sf20-201ENSMUST00000027331 1508 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx1P18111 Gm8700-201ENSMUST00000222187 3054 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms