Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm9750-201ENSMUST00000142025 2017 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Scrt1Q99M85 Zkscan1-202ENSMUST00000066617 8042 ntTSL 5 BASIC6.78□□□□□ -1.32
Scrt1Q99M85 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Scrt1Q99M85 Pbdc1-201ENSMUST00000033577 2638 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Scrt1Q99M85 Tars2-203ENSMUST00000098857 3228 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Scrt1Q99M85 Hmcn2-201ENSMUST00000113532 15646 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Scrt1Q99M85 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Scrt1Q99M85 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Scrt1Q99M85 Gm12098-201ENSMUST00000118277 508 ntBASIC6.78□□□□□ -1.32
Scrt1Q99M85 Gm12687-201ENSMUST00000119752 706 ntBASIC6.78□□□□□ -1.32
Scrt1Q99M85 Gm5406-201ENSMUST00000120054 766 ntBASIC6.78□□□□□ -1.32
Scrt1Q99M85 Gm12517-201ENSMUST00000122082 425 ntBASIC6.78□□□□□ -1.32
Scrt1Q99M85 Gm14170-201ENSMUST00000133751 331 ntTSL 3 BASIC6.78□□□□□ -1.32
Scrt1Q99M85 1700023C21Rik-201ENSMUST00000143247 389 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Scrt1Q99M85 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC6.78□□□□□ -1.32
Scrt1Q99M85 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC6.78□□□□□ -1.32
Scrt1Q99M85 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Scrt1Q99M85 Gm10680-201ENSMUST00000156612 702 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Scrt1Q99M85 Gm17235-201ENSMUST00000169128 964 ntBASIC6.78□□□□□ -1.32
Scrt1Q99M85 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC6.78□□□□□ -1.32
Scrt1Q99M85 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Scrt1Q99M85 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC6.78□□□□□ -1.32
Scrt1Q99M85 Gm38203-201ENSMUST00000191815 245 ntBASIC6.78□□□□□ -1.32
Scrt1Q99M85 Gm5541-201ENSMUST00000193248 1113 ntBASIC6.78□□□□□ -1.32
Scrt1Q99M85 Gm8896-201ENSMUST00000197434 1106 ntBASIC6.78□□□□□ -1.32
Scrt1Q99M85 Gm42723-201ENSMUST00000199966 1044 ntBASIC6.78□□□□□ -1.32
Scrt1Q99M85 Crcp-206ENSMUST00000202756 600 ntTSL 2 BASIC6.78□□□□□ -1.32
Scrt1Q99M85 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Scrt1Q99M85 Gm39121-201ENSMUST00000208847 525 ntBASIC6.78□□□□□ -1.32
Scrt1Q99M85 Gm9118-201ENSMUST00000219246 754 ntBASIC6.78□□□□□ -1.32
Scrt1Q99M85 EPPK1-201ENSMUST00000226781 12325 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Scrt1Q99M85 Dnajc5b-201ENSMUST00000029132 923 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Scrt1Q99M85 Slurp2-201ENSMUST00000057932 545 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Scrt1Q99M85 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC6.78□□□□□ -1.32
Scrt1Q99M85 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.32
Scrt1Q99M85 Sec16b-201ENSMUST00000027881 4414 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Scrt1Q99M85 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Scrt1Q99M85 AC061963.2-201ENSMUST00000213541 2739 ntBASIC6.78□□□□□ -1.32
Scrt1Q99M85 Pik3cg-205ENSMUST00000217915 3340 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Scrt1Q99M85 Muc19-202ENSMUST00000160242 9104 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Scrt1Q99M85 Olfr332-201ENSMUST00000180165 3426 ntAPPRIS P1 TSL 2 BASIC6.78□□□□□ -1.32
Scrt1Q99M85 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
Scrt1Q99M85 BC106179-201ENSMUST00000055369 4128 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Scrt1Q99M85 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Scrt1Q99M85 Ncor1-201ENSMUST00000018645 9037 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.32
Scrt1Q99M85 Scn8a-204ENSMUST00000108909 11436 ntTSL 5 BASIC6.78□□□□□ -1.32
Scrt1Q99M85 Gpm6b-203ENSMUST00000112224 4644 ntAPPRIS ALT1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Scrt1Q99M85 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Scrt1Q99M85 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Scrt1Q99M85 Cdkal1-201ENSMUST00000006353 2629 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Scrt1Q99M85 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC6.78□□□□□ -1.32
Scrt1Q99M85 1110008L16Rik-205ENSMUST00000184766 2250 ntAPPRIS P2 TSL 5 BASIC6.78□□□□□ -1.32
Scrt1Q99M85 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
Scrt1Q99M85 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC6.78□□□□□ -1.32
Scrt1Q99M85 AC153152.1-201ENSMUST00000221105 2742 ntBASIC6.78□□□□□ -1.32
Scrt1Q99M85 Luzp4-201ENSMUST00000101185 2023 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.32
Scrt1Q99M85 Siglec1-201ENSMUST00000028794 6387 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Scrt1Q99M85 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Scrt1Q99M85 Gm11855-201ENSMUST00000121562 1869 ntBASIC6.77□□□□□ -1.33
Scrt1Q99M85 Cdk6-202ENSMUST00000165117 11525 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Scrt1Q99M85 Zmym5-201ENSMUST00000039812 5290 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Scrt1Q99M85 Rab7b-202ENSMUST00000064679 4498 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Scrt1Q99M85 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Scrt1Q99M85 CT010514.1-201ENSMUST00000214088 2969 ntBASIC6.77□□□□□ -1.33
Scrt1Q99M85 Stxbp4-202ENSMUST00000107872 2529 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Scrt1Q99M85 Npffr2-201ENSMUST00000048557 1643 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Scrt1Q99M85 Gm30340-201ENSMUST00000191898 2198 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Scrt1Q99M85 Depdc5-205ENSMUST00000120902 5195 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Scrt1Q99M85 Olfr639-201ENSMUST00000106862 1020 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Scrt1Q99M85 Gm13156-201ENSMUST00000118348 321 ntBASIC6.77□□□□□ -1.33
Scrt1Q99M85 Gm13552-201ENSMUST00000118837 417 ntBASIC6.77□□□□□ -1.33
Scrt1Q99M85 Gm5759-201ENSMUST00000119203 811 ntBASIC6.77□□□□□ -1.33
Scrt1Q99M85 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC6.77□□□□□ -1.33
Scrt1Q99M85 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Scrt1Q99M85 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC6.77□□□□□ -1.33
Scrt1Q99M85 Gm7991-201ENSMUST00000168668 591 ntBASIC6.77□□□□□ -1.33
Scrt1Q99M85 Gm6536-201ENSMUST00000171180 615 ntBASIC6.77□□□□□ -1.33
Scrt1Q99M85 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
Scrt1Q99M85 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Scrt1Q99M85 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC6.77□□□□□ -1.33
Scrt1Q99M85 Rpl28-ps2-201ENSMUST00000194739 554 ntBASIC6.77□□□□□ -1.33
Scrt1Q99M85 Gm30270-201ENSMUST00000202675 524 ntTSL 2 BASIC6.77□□□□□ -1.33
Scrt1Q99M85 Gm8077-201ENSMUST00000209221 1024 ntBASIC6.77□□□□□ -1.33
Scrt1Q99M85 Gm17910-201ENSMUST00000211038 838 ntBASIC6.77□□□□□ -1.33
Scrt1Q99M85 Gm7546-202ENSMUST00000211354 275 ntBASIC6.77□□□□□ -1.33
Scrt1Q99M85 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Scrt1Q99M85 AC120002.1-201ENSMUST00000218456 331 ntBASIC6.77□□□□□ -1.33
Scrt1Q99M85 Vmn1r41-204ENSMUST00000227039 985 ntBASIC6.77□□□□□ -1.33
Scrt1Q99M85 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Scrt1Q99M85 Gm20900-201ENSMUST00000078729 472 ntBASIC6.77□□□□□ -1.33
Scrt1Q99M85 Tcp10a-204ENSMUST00000138222 1838 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
Scrt1Q99M85 Ehhadh-201ENSMUST00000023559 3018 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Scrt1Q99M85 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Scrt1Q99M85 Cep135-201ENSMUST00000049060 5313 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Scrt1Q99M85 Entpd5-202ENSMUST00000072061 4858 ntTSL 5 BASIC6.77□□□□□ -1.33
Scrt1Q99M85 Zfp488-201ENSMUST00000166737 4301 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Scrt1Q99M85 Cyp2c44-202ENSMUST00000211830 1557 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Scrt1Q99M85 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
Scrt1Q99M85 Zc4h2-201ENSMUST00000044382 2219 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Scrt1Q99M85 Gm36952-201ENSMUST00000194923 3625 ntBASIC6.77□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms