Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm9256-201ENSMUST00000198106 1420 ntBASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Gm43225-201ENSMUST00000201381 1439 ntBASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Malat1-201ENSMUST00000172812 6983 ntBASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 AC125074.1-201ENSMUST00000227970 1331 ntBASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Ifna13-201ENSMUST00000105149 819 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Gm15422-201ENSMUST00000117453 541 ntBASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Gm11997-201ENSMUST00000118697 313 ntBASIC6.09□□□□□ -1.43
Nup35Q8R4R6 0610037L13Rik-206ENSMUST00000120473 835 ntTSL 2 BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Gm15416-201ENSMUST00000131080 442 ntTSL 3 BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Gm11186-201ENSMUST00000137096 1179 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Gm14642-201ENSMUST00000147357 470 ntTSL 3 BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Gm15831-201ENSMUST00000156195 516 ntTSL 2 BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Gm22424-201ENSMUST00000158527 87 ntBASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Gm16494-201ENSMUST00000165525 261 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Gm23164-201ENSMUST00000175084 111 ntBASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Gm25442-201ENSMUST00000177270 92 ntBASIC6.09□□□□□ -1.43
Nup35Q8R4R6 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Zfp572-202ENSMUST00000184208 1078 ntBASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Gm27197-201ENSMUST00000184325 479 ntTSL 3 BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Gm29243-201ENSMUST00000188318 418 ntTSL 5 BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Gm43647-201ENSMUST00000198142 486 ntTSL 5 BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Gm31243-202ENSMUST00000198354 628 ntTSL 3 BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Gm43247-201ENSMUST00000198638 481 ntBASIC6.09□□□□□ -1.43
Nup35Q8R4R6 4933439J24Rik-201ENSMUST00000200866 853 ntBASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Gm18690-201ENSMUST00000204488 985 ntBASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Gm18943-201ENSMUST00000207357 1216 ntBASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Gm4536-201ENSMUST00000209157 542 ntBASIC6.09□□□□□ -1.43
Nup35Q8R4R6 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Gm33103-201ENSMUST00000212717 527 ntTSL 3 BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 AC142407.1-201ENSMUST00000214371 494 ntTSL 5 BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Gm34237-201ENSMUST00000220575 1257 ntTSL 5 BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 AC121357.1-201ENSMUST00000227365 608 ntBASIC6.09□□□□□ -1.43
Nup35Q8R4R6 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Trex1-201ENSMUST00000061973 1084 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Gm2531-201ENSMUST00000075609 512 ntBASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Plac8-202ENSMUST00000097437 738 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Gm43488-201ENSMUST00000198874 2504 ntBASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Gucy1b3-201ENSMUST00000029635 3223 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Rprd2-201ENSMUST00000090791 7756 ntAPPRIS P2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Nup35Q8R4R6 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC6.09□□□□□ -1.44
Nup35Q8R4R6 Slc38a6-202ENSMUST00000101313 1546 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Nup35Q8R4R6 Cpvl-203ENSMUST00000204674 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Nup35Q8R4R6 Apobec1-202ENSMUST00000112586 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Nup35Q8R4R6 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC6.09□□□□□ -1.44
Nup35Q8R4R6 Gm21036-201ENSMUST00000207544 2611 ntBASIC6.09□□□□□ -1.44
Nup35Q8R4R6 Fgf10-201ENSMUST00000022246 4114 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
Nup35Q8R4R6 Gm14035-201ENSMUST00000117596 1475 ntBASIC6.09□□□□□ -1.44
Nup35Q8R4R6 BC085271-201ENSMUST00000191852 1487 ntBASIC6.09□□□□□ -1.44
Nup35Q8R4R6 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Nup35Q8R4R6 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Nup35Q8R4R6 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC6.08□□□□□ -1.44
Nup35Q8R4R6 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Nup35Q8R4R6 4933406K04Rik-203ENSMUST00000135423 1391 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Nup35Q8R4R6 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Nup35Q8R4R6 Muc5b-201ENSMUST00000165147 14964 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Nup35Q8R4R6 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
Nup35Q8R4R6 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC6.08□□□□□ -1.44
Nup35Q8R4R6 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Nup35Q8R4R6 Gm38009-201ENSMUST00000194884 3341 ntBASIC6.08□□□□□ -1.44
Nup35Q8R4R6 Gm40778-201ENSMUST00000217825 1344 ntBASIC6.08□□□□□ -1.44
Nup35Q8R4R6 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Nup35Q8R4R6 AC158988.1-201ENSMUST00000226731 2624 ntBASIC6.08□□□□□ -1.44
Nup35Q8R4R6 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Nup35Q8R4R6 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Nup35Q8R4R6 Gm31614-201ENSMUST00000215504 3231 ntTSL 5 BASIC6.08□□□□□ -1.44
Nup35Q8R4R6 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Nup35Q8R4R6 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Nup35Q8R4R6 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Nup35Q8R4R6 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC6.08□□□□□ -1.44
Nup35Q8R4R6 Gm12883-201ENSMUST00000117867 364 ntBASIC6.08□□□□□ -1.44
Nup35Q8R4R6 Gm8802-201ENSMUST00000118633 740 ntBASIC6.08□□□□□ -1.44
Nup35Q8R4R6 Gm14983-201ENSMUST00000121551 323 ntBASIC6.08□□□□□ -1.44
Nup35Q8R4R6 Gm14225-201ENSMUST00000142310 539 ntTSL 2 BASIC6.08□□□□□ -1.44
Nup35Q8R4R6 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Nup35Q8R4R6 Gm25372-201ENSMUST00000158161 255 ntBASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms