Protein–RNA interactions for Protein: Q7TPM3

Trim17, E3 ubiquitin-protein ligase TRIM17, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17Q7TPM3 AC157572.1-201ENSMUST00000227187 825 ntBASIC8.15□□□□□ -1.1
Trim17Q7TPM3 AC139209.2-201ENSMUST00000227680 1208 ntBASIC8.15□□□□□ -1.1
Trim17Q7TPM3 Dbi-201ENSMUST00000027634 569 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim17Q7TPM3 Arhgef38-201ENSMUST00000054105 814 ntTSL 5 BASIC8.15□□□□□ -1.1
Trim17Q7TPM3 Cldn10-202ENSMUST00000071546 1031 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Trim17Q7TPM3 Anapc15-ps-201ENSMUST00000099328 426 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.1
Trim17Q7TPM3 Kbtbd3-202ENSMUST00000212221 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim17Q7TPM3 Zkscan5-201ENSMUST00000031601 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Trim17Q7TPM3 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim17Q7TPM3 Grm8-203ENSMUST00000115324 3299 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim17Q7TPM3 Pclaf-201ENSMUST00000045802 2188 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim17Q7TPM3 CU024890.1-201ENSMUST00000221361 2019 ntBASIC8.15□□□□□ -1.11
Trim17Q7TPM3 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim17Q7TPM3 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim17Q7TPM3 Zfp248-201ENSMUST00000069292 3683 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim17Q7TPM3 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Trim17Q7TPM3 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.11
Trim17Q7TPM3 Scn3b-201ENSMUST00000049941 4150 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim17Q7TPM3 Htt-201ENSMUST00000080036 13215 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim17Q7TPM3 Pde10a-201ENSMUST00000024647 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim17Q7TPM3 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim17Q7TPM3 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Trim17Q7TPM3 Olfr92-203ENSMUST00000216341 2115 ntAPPRIS P1 TSL 5 BASIC8.14□□□□□ -1.11
Trim17Q7TPM3 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim17Q7TPM3 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim17Q7TPM3 Gm16316-201ENSMUST00000154065 3393 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim17Q7TPM3 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC8.14□□□□□ -1.11
Trim17Q7TPM3 Flrt3-201ENSMUST00000056760 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim17Q7TPM3 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim17Q7TPM3 Gm4918-201ENSMUST00000119420 1084 ntBASIC8.14□□□□□ -1.11
Trim17Q7TPM3 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim17Q7TPM3 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC8.14□□□□□ -1.11
Trim17Q7TPM3 Gm5350-201ENSMUST00000182057 1002 ntBASIC8.14□□□□□ -1.11
Trim17Q7TPM3 Gm27596-201ENSMUST00000185061 83 ntBASIC8.14□□□□□ -1.11
Trim17Q7TPM3 Gm5541-201ENSMUST00000193248 1113 ntBASIC8.14□□□□□ -1.11
Trim17Q7TPM3 Gm17530-201ENSMUST00000194336 472 ntBASIC8.14□□□□□ -1.11
Trim17Q7TPM3 Gm20136-201ENSMUST00000207501 891 ntBASIC8.14□□□□□ -1.11
Trim17Q7TPM3 4930477G07Rik-202ENSMUST00000223195 947 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim17Q7TPM3 AC126805.1-201ENSMUST00000225142 262 ntBASIC8.14□□□□□ -1.11
Trim17Q7TPM3 AC129537.1-202ENSMUST00000226619 430 ntBASIC8.14□□□□□ -1.11
Trim17Q7TPM3 AC154692.1-202ENSMUST00000226632 1231 ntBASIC8.14□□□□□ -1.11
Trim17Q7TPM3 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim17Q7TPM3 Krtap26-1-201ENSMUST00000095934 973 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Trim17Q7TPM3 Mtbp-205ENSMUST00000170046 3197 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim17Q7TPM3 AC117656.3-203ENSMUST00000225007 1809 ntBASIC8.14□□□□□ -1.11
Trim17Q7TPM3 Ablim3-202ENSMUST00000166783 4213 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim17Q7TPM3 Mtrf1-201ENSMUST00000022600 1799 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim17Q7TPM3 Sap130-201ENSMUST00000025109 4015 ntAPPRIS P2 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim17Q7TPM3 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC8.14□□□□□ -1.11
Trim17Q7TPM3 Tgs1-201ENSMUST00000052712 4327 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim17Q7TPM3 Itch-202ENSMUST00000109685 5309 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Trim17Q7TPM3 Gm37066-201ENSMUST00000192713 2061 ntBASIC8.14□□□□□ -1.11
Trim17Q7TPM3 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Trim17Q7TPM3 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Parp9-201ENSMUST00000023622 2973 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim17Q7TPM3 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC8.13□□□□□ -1.11
Trim17Q7TPM3 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Gatad2b-203ENSMUST00000197988 1815 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Fam102b-201ENSMUST00000046924 5368 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Eri2-207ENSMUST00000150844 3564 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Mroh4-202ENSMUST00000137963 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim17Q7TPM3 5430420F09Rik-201ENSMUST00000194956 1799 ntBASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Gm22231-201ENSMUST00000101027 73 ntBASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Smgc-203ENSMUST00000109276 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Omt2a-202ENSMUST00000113376 478 ntAPPRIS ALT2 TSL 3 BASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Serpina3h-202ENSMUST00000116393 1226 ntBASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Gm12967-201ENSMUST00000122147 289 ntBASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Gm8715-201ENSMUST00000162728 531 ntBASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Gm5327-201ENSMUST00000182864 1009 ntBASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Ly6a-202ENSMUST00000186526 862 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Olfr318-201ENSMUST00000189911 1026 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Ighv1-73-201ENSMUST00000197435 352 ntBASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Gm31881-202ENSMUST00000199455 559 ntTSL 3 BASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Gm42584-201ENSMUST00000201404 220 ntBASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Gm43226-201ENSMUST00000202438 259 ntBASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Gm30646-201ENSMUST00000207662 180 ntBASIC8.13□□□□□ -1.11
Trim17Q7TPM3 AC124510.2-201ENSMUST00000221958 683 ntBASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Gcnt2-204ENSMUST00000223570 335 ntBASIC8.13□□□□□ -1.11
Trim17Q7TPM3 AC165281.1-201ENSMUST00000225713 1011 ntBASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Diaph3-204ENSMUST00000226254 682 ntBASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Mir138-2-201ENSMUST00000083578 71 ntBASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Nsun2-201ENSMUST00000022087 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Met-201ENSMUST00000080469 4140 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Serpina1a-201ENSMUST00000072876 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Slc25a53-203ENSMUST00000113070 3140 ntTSL 5 BASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Gm44802-201ENSMUST00000208026 1916 ntBASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Trim17Q7TPM3 Grik2-205ENSMUST00000218598 3245 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim17Q7TPM3 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Trim17Q7TPM3 Cd247-208ENSMUST00000178336 2807 ntTSL 5 BASIC8.12□□□□□ -1.11
Trim17Q7TPM3 Inpp5d-209ENSMUST00000168783 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms