Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Rassf6-206ENSMUST00000202784 1919 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb1P63158 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb1P63158 Gm16233-201ENSMUST00000136170 1623 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb1P63158 Gm45084-201ENSMUST00000207096 1957 ntBASIC8.71□□□□□ -1.02
Hmgb1P63158 Papss2-201ENSMUST00000025833 3635 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb1P63158 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb1P63158 1810053B23Rik-204ENSMUST00000185971 1309 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb1P63158 AC160863.4-201ENSMUST00000218099 1334 ntTSL 5 BASIC8.71□□□□□ -1.02
Hmgb1P63158 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb1P63158 Glrx-204ENSMUST00000223120 1333 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Hmgb1P63158 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
Hmgb1P63158 Gm16523-202ENSMUST00000203640 4750 ntBASIC8.71□□□□□ -1.02
Hmgb1P63158 Gm20531-201ENSMUST00000174861 1373 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb1P63158 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb1P63158 Sec24a-201ENSMUST00000038210 3800 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.02
Hmgb1P63158 Olfr859-202ENSMUST00000212540 9532 ntAPPRIS P1 TSL 3 BASIC8.71□□□□□ -1.02
Hmgb1P63158 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC8.71□□□□□ -1.02
Hmgb1P63158 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb1P63158 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Hmgb1P63158 Rnf141-209ENSMUST00000177236 4032 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb1P63158 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb1P63158 CT009515.4-201ENSMUST00000228165 1494 ntBASIC8.7□□□□□ -1.02
Hmgb1P63158 Olfr650-ps1-201ENSMUST00000121432 2321 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Hmgb1P63158 Cxcl5-201ENSMUST00000031318 1575 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
Hmgb1P63158 Gm36757-201ENSMUST00000221818 3556 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb1P63158 Zbtb26-202ENSMUST00000102789 2047 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb1P63158 Slc7a2-204ENSMUST00000118432 3681 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb1P63158 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb1P63158 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb1P63158 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb1P63158 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC8.7□□□□□ -1.02
Hmgb1P63158 Gm42866-201ENSMUST00000195919 3304 ntBASIC8.7□□□□□ -1.02
Hmgb1P63158 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC8.7□□□□□ -1.02
Hmgb1P63158 CR974429.2-201ENSMUST00000221883 1696 ntBASIC8.7□□□□□ -1.02
Hmgb1P63158 Gm25761-201ENSMUST00000103983 128 ntBASIC8.7□□□□□ -1.02
Hmgb1P63158 Gm23840-201ENSMUST00000116950 97 ntBASIC8.7□□□□□ -1.02
Hmgb1P63158 Gm13254-201ENSMUST00000118295 654 ntBASIC8.7□□□□□ -1.02
Hmgb1P63158 Gm12875-201ENSMUST00000118745 344 ntBASIC8.7□□□□□ -1.02
Hmgb1P63158 Gm12870-201ENSMUST00000121383 1016 ntBASIC8.7□□□□□ -1.02
Hmgb1P63158 Gm12648-201ENSMUST00000126270 656 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb1P63158 Grip1os1-202ENSMUST00000135940 1192 ntTSL 5 BASIC8.7□□□□□ -1.02
Hmgb1P63158 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb1P63158 Smarcal1-207ENSMUST00000152225 2994 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb1P63158 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb1P63158 Gm25190-201ENSMUST00000176664 95 ntBASIC8.7□□□□□ -1.02
Hmgb1P63158 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC8.7□□□□□ -1.02
Hmgb1P63158 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb1P63158 Gm28193-201ENSMUST00000189863 615 ntBASIC8.7□□□□□ -1.02
Hmgb1P63158 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb1P63158 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC8.7□□□□□ -1.02
Hmgb1P63158 Gm42723-201ENSMUST00000199966 1044 ntBASIC8.7□□□□□ -1.02
Hmgb1P63158 Gm42884-201ENSMUST00000200729 422 ntTSL 2 BASIC8.7□□□□□ -1.02
Hmgb1P63158 Gm43124-201ENSMUST00000201878 278 ntBASIC8.7□□□□□ -1.02
Hmgb1P63158 Gm44287-201ENSMUST00000203069 290 ntTSL 3 BASIC8.7□□□□□ -1.02
Hmgb1P63158 Gm44588-201ENSMUST00000208401 545 ntTSL 5 BASIC8.7□□□□□ -1.02
Hmgb1P63158 Gm45625-201ENSMUST00000209412 650 ntTSL 5 BASIC8.7□□□□□ -1.02
Hmgb1P63158 Gm3774-201ENSMUST00000209773 435 ntBASIC8.7□□□□□ -1.02
Hmgb1P63158 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC8.7□□□□□ -1.02
Hmgb1P63158 Gm18504-201ENSMUST00000220917 929 ntBASIC8.7□□□□□ -1.02
Hmgb1P63158 Krtap3-1-201ENSMUST00000055502 604 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Hmgb1P63158 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Hmgb1P63158 Gpbp1l1-202ENSMUST00000106475 2642 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb1P63158 4930456G14Rik-201ENSMUST00000193054 1330 ntBASIC8.7□□□□□ -1.02
Hmgb1P63158 AC125487.1-201ENSMUST00000217888 1300 ntBASIC8.7□□□□□ -1.02
Hmgb1P63158 AC121094.1-201ENSMUST00000224766 1345 ntBASIC8.7□□□□□ -1.02
Hmgb1P63158 Cbll1-202ENSMUST00000085487 1332 ntTSL 5 BASIC8.7□□□□□ -1.02
Hmgb1P63158 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
Hmgb1P63158 Mrpl35-201ENSMUST00000065103 3721 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb1P63158 Abhd3-201ENSMUST00000002549 1885 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb1P63158 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Hmgb1P63158 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb1P63158 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb1P63158 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb1P63158 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Hmgb1P63158 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb1P63158 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb1P63158 Trim40-203ENSMUST00000172711 1539 ntAPPRIS ALT2 TSL 1 (best) BASIC8.7□□□□□ -1.02
Hmgb1P63158 Gfral-201ENSMUST00000074880 2080 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hmgb1P63158 AC154461.6-201ENSMUST00000224815 2630 ntBASIC8.69□□□□□ -1.02
Hmgb1P63158 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC8.69□□□□□ -1.02
Hmgb1P63158 Ifit1bl2-202ENSMUST00000112463 3217 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hmgb1P63158 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Hmgb1P63158 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Hmgb1P63158 Crb1-204ENSMUST00000198445 6135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hmgb1P63158 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC8.69□□□□□ -1.02
Hmgb1P63158 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hmgb1P63158 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Hmgb1P63158 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Hmgb1P63158 Gm24938-201ENSMUST00000102225 110 ntBASIC8.69□□□□□ -1.02
Hmgb1P63158 Calhm1-201ENSMUST00000111813 1047 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Hmgb1P63158 Gm14610-201ENSMUST00000118358 966 ntBASIC8.69□□□□□ -1.02
Hmgb1P63158 Gm12959-201ENSMUST00000119396 403 ntBASIC8.69□□□□□ -1.02
Hmgb1P63158 Gm2214-201ENSMUST00000121333 330 ntBASIC8.69□□□□□ -1.02
Hmgb1P63158 Gm14328-201ENSMUST00000122178 408 ntBASIC8.69□□□□□ -1.02
Hmgb1P63158 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Hmgb1P63158 Gm15221-201ENSMUST00000144439 414 ntTSL 3 BASIC8.69□□□□□ -1.02
Hmgb1P63158 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC8.69□□□□□ -1.02
Hmgb1P63158 Gm12976-201ENSMUST00000150171 459 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Hmgb1P63158 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Hmgb1P63158 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 92.8 ms