Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Olfr467-202ENSMUST00000208563 1852 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
NcanP55066 Olfr467-203ENSMUST00000214253 1855 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
NcanP55066 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
NcanP55066 Gm37382-201ENSMUST00000193032 1596 ntBASIC8.15□□□□□ -1.1
NcanP55066 Dkc1-201ENSMUST00000033776 2804 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
NcanP55066 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC8.15□□□□□ -1.1
NcanP55066 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
NcanP55066 Phldb2-202ENSMUST00000076333 5347 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
NcanP55066 Gm11858-201ENSMUST00000117935 838 ntBASIC8.15□□□□□ -1.1
NcanP55066 Gm13900-201ENSMUST00000119402 498 ntBASIC8.15□□□□□ -1.1
NcanP55066 Gm13486-201ENSMUST00000119910 282 ntBASIC8.15□□□□□ -1.1
NcanP55066 Mup-ps16-201ENSMUST00000120085 596 ntBASIC8.15□□□□□ -1.1
NcanP55066 Gm12903-201ENSMUST00000121015 544 ntBASIC8.15□□□□□ -1.1
NcanP55066 Gm16113-201ENSMUST00000159629 372 ntBASIC8.15□□□□□ -1.1
NcanP55066 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC8.15□□□□□ -1.1
NcanP55066 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
NcanP55066 Esd-209ENSMUST00000177181 835 ntTSL 5 BASIC8.15□□□□□ -1.1
NcanP55066 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC8.15□□□□□ -1.1
NcanP55066 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC8.15□□□□□ -1.1
NcanP55066 Gm38373-201ENSMUST00000192042 288 ntBASIC8.15□□□□□ -1.1
NcanP55066 Gm7019-201ENSMUST00000194122 369 ntBASIC8.15□□□□□ -1.1
NcanP55066 Gm36939-201ENSMUST00000194889 439 ntBASIC8.15□□□□□ -1.1
NcanP55066 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
NcanP55066 Olfr1240-201ENSMUST00000215362 1074 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
NcanP55066 AC154595.1-201ENSMUST00000225533 1059 ntBASIC8.15□□□□□ -1.1
NcanP55066 AC170810.1-201ENSMUST00000228267 672 ntBASIC8.15□□□□□ -1.1
NcanP55066 Runx1-207ENSMUST00000189679 2538 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
NcanP55066 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
NcanP55066 Cacna1f-202ENSMUST00000115726 6079 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
NcanP55066 Pik3cg-201ENSMUST00000053215 5871 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
NcanP55066 Csnk1d-202ENSMUST00000070575 3500 ntAPPRIS ALT1 TSL 1 (best) BASIC8.15□□□□□ -1.1
NcanP55066 Hpgds-201ENSMUST00000031982 3476 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
NcanP55066 Stk38l-202ENSMUST00000111644 2274 ntTSL 5 BASIC8.15□□□□□ -1.1
NcanP55066 Synj2bp-204ENSMUST00000164431 3305 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
NcanP55066 3632451O06Rik-202ENSMUST00000118129 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
NcanP55066 Gm16487-201ENSMUST00000105048 4037 ntBASIC8.15□□□□□ -1.11
NcanP55066 Mill2-205ENSMUST00000227379 1998 ntAPPRIS ALT2 BASIC8.15□□□□□ -1.11
NcanP55066 Ndst3-206ENSMUST00000154668 5570 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
NcanP55066 Ctns-202ENSMUST00000108476 2723 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
NcanP55066 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC8.15□□□□□ -1.11
NcanP55066 Cd300lb-203ENSMUST00000149663 2641 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
NcanP55066 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.11
NcanP55066 Adamtsl1-203ENSMUST00000107178 7839 ntAPPRIS P2 TSL 5 BASIC8.15□□□□□ -1.11
NcanP55066 1500004A13Rik-202ENSMUST00000183707 6054 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
NcanP55066 Nlrp12-201ENSMUST00000108653 6928 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.11
NcanP55066 Asb17-201ENSMUST00000044089 2553 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
NcanP55066 Ubap2l-208ENSMUST00000196843 3975 ntTSL 5 BASIC8.14□□□□□ -1.11
NcanP55066 Gm12346-201ENSMUST00000121455 2255 ntBASIC8.14□□□□□ -1.11
NcanP55066 Pcdh15-225ENSMUST00000149977 5843 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
NcanP55066 Pcdh15-226ENSMUST00000151116 6287 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
NcanP55066 Gatb-204ENSMUST00000127348 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
NcanP55066 Gm16026-206ENSMUST00000163068 2741 ntBASIC8.14□□□□□ -1.11
NcanP55066 9930022D16Rik-201ENSMUST00000055404 2706 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
NcanP55066 Mast2-202ENSMUST00000106484 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
NcanP55066 Nrp2-205ENSMUST00000114155 6534 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
NcanP55066 Igkv4-68-201ENSMUST00000103350 394 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
NcanP55066 Igkv4-59-201ENSMUST00000103354 368 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
NcanP55066 Gm23768-201ENSMUST00000104440 131 ntBASIC8.14□□□□□ -1.11
NcanP55066 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC8.14□□□□□ -1.11
NcanP55066 Gm11649-201ENSMUST00000118214 375 ntBASIC8.14□□□□□ -1.11
NcanP55066 Gm13772-201ENSMUST00000118431 317 ntBASIC8.14□□□□□ -1.11
NcanP55066 Gm13545-201ENSMUST00000119044 482 ntBASIC8.14□□□□□ -1.11
NcanP55066 Gm14580-201ENSMUST00000119122 718 ntBASIC8.14□□□□□ -1.11
NcanP55066 Gm6044-201ENSMUST00000121819 499 ntBASIC8.14□□□□□ -1.11
NcanP55066 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC8.14□□□□□ -1.11
NcanP55066 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC8.14□□□□□ -1.11
NcanP55066 Gm15092-201ENSMUST00000138467 574 ntTSL 5 BASIC8.14□□□□□ -1.11
NcanP55066 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC8.14□□□□□ -1.11
NcanP55066 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC8.14□□□□□ -1.11
NcanP55066 Gm16138-201ENSMUST00000159341 821 ntBASIC8.14□□□□□ -1.11
NcanP55066 Gm3326-201ENSMUST00000164656 1043 ntBASIC8.14□□□□□ -1.11
NcanP55066 Svs6-201ENSMUST00000017144 535 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
NcanP55066 Gm6055-201ENSMUST00000180532 378 ntBASIC8.14□□□□□ -1.11
NcanP55066 Mir8094-201ENSMUST00000183361 117 ntBASIC8.14□□□□□ -1.11
NcanP55066 Gm43945-201ENSMUST00000203595 754 ntBASIC8.14□□□□□ -1.11
NcanP55066 Spcs2-203ENSMUST00000207137 881 ntTSL 5 BASIC8.14□□□□□ -1.11
NcanP55066 Gm18907-201ENSMUST00000209719 932 ntBASIC8.14□□□□□ -1.11
NcanP55066 Gm29154-205ENSMUST00000213325 1112 ntTSL 5 BASIC8.14□□□□□ -1.11
NcanP55066 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC8.14□□□□□ -1.11
NcanP55066 AC164295.1-201ENSMUST00000224861 186 ntBASIC8.14□□□□□ -1.11
NcanP55066 AV026068-229ENSMUST00000225516 595 ntBASIC8.14□□□□□ -1.11
NcanP55066 Gm6990-201ENSMUST00000086830 348 ntBASIC8.14□□□□□ -1.11
NcanP55066 Rpl31-ps17-201ENSMUST00000097040 378 ntBASIC8.14□□□□□ -1.11
NcanP55066 Vps8-201ENSMUST00000096191 4952 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
NcanP55066 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
NcanP55066 Hspbap1-201ENSMUST00000023555 4590 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
NcanP55066 Stxbp5l-205ENSMUST00000114782 3996 ntAPPRIS ALT2 TSL 5 BASIC8.14□□□□□ -1.11
NcanP55066 Zswim9-202ENSMUST00000119139 3986 ntAPPRIS P5 TSL 1 (best) BASIC8.14□□□□□ -1.11
NcanP55066 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
NcanP55066 Gm4849-201ENSMUST00000188428 2246 ntBASIC8.14□□□□□ -1.11
NcanP55066 Egf-202ENSMUST00000197079 3346 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
NcanP55066 Fancl-201ENSMUST00000004120 2724 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
NcanP55066 Zfyve9-201ENSMUST00000042185 2170 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
NcanP55066 Fkbp14-201ENSMUST00000046520 2694 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
NcanP55066 Tcf4-201ENSMUST00000066717 4250 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
NcanP55066 Tmem87a-203ENSMUST00000110729 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC8.14□□□□□ -1.11
NcanP55066 Gm33167-201ENSMUST00000201933 2643 ntBASIC8.14□□□□□ -1.11
NcanP55066 Myo6-201ENSMUST00000035889 7871 ntTSL 5 BASIC8.14□□□□□ -1.11
NcanP55066 Rngtt-202ENSMUST00000108153 4157 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
NcanP55066 Fgf13-202ENSMUST00000119306 2091 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 87.6 ms