Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Tcam1-201ENSMUST00000044462 3511 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Msh6P54276 Tpd52l2-204ENSMUST00000108800 3475 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Msh6P54276 Zkscan5-201ENSMUST00000031601 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Msh6P54276 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Msh6P54276 Nufip1-201ENSMUST00000022586 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Msh6P54276 Gm25760-201ENSMUST00000103989 132 ntBASIC9.68□□□□□ -0.86
Msh6P54276 Defa-ps7-201ENSMUST00000117139 168 ntBASIC9.68□□□□□ -0.86
Msh6P54276 Gm11928-201ENSMUST00000119323 437 ntBASIC9.68□□□□□ -0.86
Msh6P54276 Gm6921-201ENSMUST00000161478 435 ntBASIC9.68□□□□□ -0.86
Msh6P54276 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Msh6P54276 Gm23018-201ENSMUST00000177928 109 ntBASIC9.68□□□□□ -0.86
Msh6P54276 Gm27373-201ENSMUST00000184017 184 ntBASIC9.68□□□□□ -0.86
Msh6P54276 Gm18501-201ENSMUST00000185363 664 ntBASIC9.68□□□□□ -0.86
Msh6P54276 Gm29015-201ENSMUST00000187147 207 ntTSL 5 BASIC9.68□□□□□ -0.86
Msh6P54276 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Msh6P54276 Gm43849-201ENSMUST00000201086 215 ntBASIC9.68□□□□□ -0.86
Msh6P54276 Gm42963-201ENSMUST00000202943 1217 ntBASIC9.68□□□□□ -0.86
Msh6P54276 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC9.68□□□□□ -0.86
Msh6P54276 AC159188.3-201ENSMUST00000224199 880 ntBASIC9.68□□□□□ -0.86
Msh6P54276 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
Msh6P54276 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC9.68□□□□□ -0.86
Msh6P54276 Gm42969-201ENSMUST00000199858 3631 ntBASIC9.68□□□□□ -0.86
Msh6P54276 Myh15-201ENSMUST00000168680 6340 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Msh6P54276 Olfr632-203ENSMUST00000214711 3282 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Msh6P54276 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
Msh6P54276 Eif2ak4-206ENSMUST00000110874 5298 ntTSL 5 BASIC9.68□□□□□ -0.86
Msh6P54276 4930528G23Rik-201ENSMUST00000124575 1723 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Msh6P54276 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
Msh6P54276 Dalir-201ENSMUST00000188773 2170 ntBASIC9.68□□□□□ -0.86
Msh6P54276 Mettl6-205ENSMUST00000227777 2762 ntAPPRIS ALT2 BASIC9.68□□□□□ -0.86
Msh6P54276 Mapk9-203ENSMUST00000102778 4447 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Msh6P54276 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Msh6P54276 Kirrel3-206ENSMUST00000187625 4108 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Msh6P54276 Ighv1-19-201ENSMUST00000103505 348 ntAPPRIS ALT2 BASIC9.67□□□□□ -0.86
Msh6P54276 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Msh6P54276 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Msh6P54276 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC9.67□□□□□ -0.86
Msh6P54276 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC9.67□□□□□ -0.86
Msh6P54276 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC9.67□□□□□ -0.86
Msh6P54276 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Msh6P54276 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Msh6P54276 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Msh6P54276 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC9.67□□□□□ -0.86
Msh6P54276 Gm44760-201ENSMUST00000206375 1173 ntBASIC9.67□□□□□ -0.86
Msh6P54276 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Msh6P54276 Gm9118-201ENSMUST00000219246 754 ntBASIC9.67□□□□□ -0.86
Msh6P54276 Map2-207ENSMUST00000114018 5303 ntAPPRIS P3 TSL 5 BASIC9.67□□□□□ -0.86
Msh6P54276 Cd300lg-203ENSMUST00000107164 2737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Msh6P54276 Add2-209ENSMUST00000204059 8182 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Msh6P54276 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC9.67□□□□□ -0.86
Msh6P54276 Utrn-205ENSMUST00000218635 11801 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Msh6P54276 Med12-202ENSMUST00000087956 6746 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Msh6P54276 Calb1-201ENSMUST00000029876 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Msh6P54276 St8sia4-201ENSMUST00000043336 5390 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Msh6P54276 Rdh16-201ENSMUST00000071646 3207 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Msh6P54276 Ccdc141-207ENSMUST00000164114 6222 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Msh6P54276 Tmem35a-201ENSMUST00000037687 1918 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Msh6P54276 2810039B14Rik-204ENSMUST00000184801 2796 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Msh6P54276 Slc34a1-205ENSMUST00000225259 3983 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Msh6P54276 Sox2ot-215ENSMUST00000199171 3486 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Msh6P54276 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC9.67□□□□□ -0.86
Msh6P54276 Gm42546-201ENSMUST00000201584 2592 ntBASIC9.66□□□□□ -0.86
Msh6P54276 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.86
Msh6P54276 Gas7-204ENSMUST00000108682 7067 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Msh6P54276 Col6a5-201ENSMUST00000165165 8046 ntTSL 5 BASIC9.66□□□□□ -0.86
Msh6P54276 Gpatch8-206ENSMUST00000143842 6871 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Msh6P54276 Gpm6b-203ENSMUST00000112224 4644 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Msh6P54276 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Msh6P54276 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Msh6P54276 Gm11880-201ENSMUST00000117612 399 ntBASIC9.66□□□□□ -0.86
Msh6P54276 Gm5390-201ENSMUST00000119069 1230 ntBASIC9.66□□□□□ -0.86
Msh6P54276 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC9.66□□□□□ -0.86
Msh6P54276 Gm11371-201ENSMUST00000120294 385 ntBASIC9.66□□□□□ -0.86
Msh6P54276 Gm15316-201ENSMUST00000121082 421 ntBASIC9.66□□□□□ -0.86
Msh6P54276 Gm23888-201ENSMUST00000122690 253 ntBASIC9.66□□□□□ -0.86
Msh6P54276 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC9.66□□□□□ -0.86
Msh6P54276 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Msh6P54276 Mgst2-206ENSMUST00000161590 481 ntTSL 3 BASIC9.66□□□□□ -0.86
Msh6P54276 Gm7420-201ENSMUST00000162836 842 ntBASIC9.66□□□□□ -0.86
Msh6P54276 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Msh6P54276 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC9.66□□□□□ -0.86
Msh6P54276 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC9.66□□□□□ -0.86
Msh6P54276 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC9.66□□□□□ -0.86
Msh6P54276 Gm42883-201ENSMUST00000202594 222 ntBASIC9.66□□□□□ -0.86
Msh6P54276 Olfr1251-203ENSMUST00000214750 1040 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
Msh6P54276 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC9.66□□□□□ -0.86
Msh6P54276 n-R5s41-201ENSMUST00000083025 119 ntBASIC9.66□□□□□ -0.86
Msh6P54276 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Msh6P54276 Prpf4-201ENSMUST00000084524 5223 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Msh6P54276 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Msh6P54276 AU015836-202ENSMUST00000121565 2997 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Msh6P54276 Gm26888-201ENSMUST00000181119 3683 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Msh6P54276 Adamtsl1-203ENSMUST00000107178 7839 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
Msh6P54276 Has3-201ENSMUST00000034385 5912 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Msh6P54276 Dcp1a-201ENSMUST00000022535 5576 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Msh6P54276 Ddr2-202ENSMUST00000170800 8289 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
Msh6P54276 Ralgps2-204ENSMUST00000172057 6863 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Msh6P54276 Gtdc1-201ENSMUST00000049051 2197 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Msh6P54276 Gdpgp1-201ENSMUST00000062915 4189 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Msh6P54276 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 131 ms