Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Sox1P53783 Gm18705-201ENSMUST00000215985 913 ntBASIC8.34□□□□□ -1.07
Sox1P53783 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC8.34□□□□□ -1.07
Sox1P53783 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC8.34□□□□□ -1.07
Sox1P53783 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Sox1P53783 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Sox1P53783 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Sox1P53783 Scml2-204ENSMUST00000087090 2953 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
Sox1P53783 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Sox1P53783 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Sox1P53783 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
Sox1P53783 Pus7-206ENSMUST00000148618 3266 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sox1P53783 Vill-201ENSMUST00000051386 2909 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sox1P53783 Gm37066-201ENSMUST00000192713 2061 ntBASIC8.34□□□□□ -1.07
Sox1P53783 Pex5l-209ENSMUST00000193289 3526 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Sox1P53783 Phactr1-205ENSMUST00000128646 5430 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
Sox1P53783 A630001G21Rik-201ENSMUST00000064788 1353 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
Sox1P53783 F630040K05Rik-201ENSMUST00000180519 2841 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
Sox1P53783 Stau2-207ENSMUST00000131257 3616 ntTSL 5 BASIC8.34□□□□□ -1.08
Sox1P53783 Sh3bgrl2-201ENSMUST00000113215 4565 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
Sox1P53783 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.08
Sox1P53783 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.08
Sox1P53783 Ppp1r12a-201ENSMUST00000070663 3403 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Sox1P53783 Tmem69-202ENSMUST00000106478 1962 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sox1P53783 Lmod2-201ENSMUST00000031694 1976 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sox1P53783 Tkt-201ENSMUST00000022529 3223 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sox1P53783 Gm37366-201ENSMUST00000194487 2297 ntBASIC8.33□□□□□ -1.08
Sox1P53783 Cd22-203ENSMUST00000186154 3819 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sox1P53783 Gm44639-201ENSMUST00000205859 3009 ntBASIC8.33□□□□□ -1.08
Sox1P53783 Bcat1-201ENSMUST00000032402 7833 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Sox1P53783 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC8.33□□□□□ -1.08
Sox1P53783 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC8.33□□□□□ -1.08
Sox1P53783 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC8.33□□□□□ -1.08
Sox1P53783 Palb2-203ENSMUST00000106468 3304 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Sox1P53783 Rgs8-202ENSMUST00000111810 5614 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sox1P53783 Cd200-201ENSMUST00000023341 2085 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Sox1P53783 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sox1P53783 Dhx30-203ENSMUST00000165596 3726 ntTSL 5 BASIC8.33□□□□□ -1.08
Sox1P53783 Dclk1-201ENSMUST00000054237 7847 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sox1P53783 Epb41l3-201ENSMUST00000080208 4047 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sox1P53783 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sox1P53783 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Sox1P53783 St7-206ENSMUST00000115417 2168 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Sox1P53783 5033423K11Rik-201ENSMUST00000117311 787 ntBASIC8.33□□□□□ -1.08
Sox1P53783 Gm15568-201ENSMUST00000118589 1213 ntBASIC8.33□□□□□ -1.08
Sox1P53783 Gm4342-201ENSMUST00000118982 367 ntBASIC8.33□□□□□ -1.08
Sox1P53783 Gm14466-201ENSMUST00000119028 451 ntBASIC8.33□□□□□ -1.08
Sox1P53783 Gm13649-201ENSMUST00000122325 606 ntBASIC8.33□□□□□ -1.08
Sox1P53783 Gm11871-201ENSMUST00000122429 1061 ntBASIC8.33□□□□□ -1.08
Sox1P53783 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Sox1P53783 Gm16363-201ENSMUST00000132460 877 ntBASIC8.33□□□□□ -1.08
Sox1P53783 Gm22224-201ENSMUST00000157357 93 ntBASIC8.33□□□□□ -1.08
Sox1P53783 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC8.33□□□□□ -1.08
Sox1P53783 Gm8159-201ENSMUST00000163738 997 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Sox1P53783 Gm8297-201ENSMUST00000171636 997 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
Sox1P53783 Obox2-202ENSMUST00000172478 818 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Sox1P53783 Vmn2r-ps60-201ENSMUST00000173296 897 ntBASIC8.33□□□□□ -1.08
Sox1P53783 Dxo-208ENSMUST00000174092 738 ntTSL 5 BASIC8.33□□□□□ -1.08
Sox1P53783 Gm27595-201ENSMUST00000184579 112 ntBASIC8.33□□□□□ -1.08
Sox1P53783 Gm19480-201ENSMUST00000185547 667 ntBASIC8.33□□□□□ -1.08
Sox1P53783 Gm8506-201ENSMUST00000186661 829 ntBASIC8.33□□□□□ -1.08
Sox1P53783 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Sox1P53783 1700054A03Rik-201ENSMUST00000187368 780 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Sox1P53783 Gm37383-201ENSMUST00000191750 745 ntBASIC8.33□□□□□ -1.08
Sox1P53783 Gm37843-201ENSMUST00000195213 2639 ntBASIC8.33□□□□□ -1.08
Sox1P53783 Gm43411-201ENSMUST00000196235 1579 ntBASIC8.33□□□□□ -1.08
Sox1P53783 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC8.33□□□□□ -1.08
Sox1P53783 Gm42435-201ENSMUST00000196630 1448 ntBASIC8.33□□□□□ -1.08
Sox1P53783 Gm43396-201ENSMUST00000197506 706 ntBASIC8.33□□□□□ -1.08
Sox1P53783 AC151967.1-201ENSMUST00000198146 76 ntBASIC8.33□□□□□ -1.08
Sox1P53783 Gm43771-201ENSMUST00000202931 1578 ntBASIC8.33□□□□□ -1.08
Sox1P53783 Gm3549-201ENSMUST00000203873 794 ntBASIC8.33□□□□□ -1.08
Sox1P53783 Gm44590-201ENSMUST00000206161 391 ntBASIC8.33□□□□□ -1.08
Sox1P53783 Olfr173-202ENSMUST00000206205 2778 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
Sox1P53783 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC8.33□□□□□ -1.08
Sox1P53783 Gm18914-201ENSMUST00000214625 616 ntBASIC8.33□□□□□ -1.08
Sox1P53783 AL929285.1-201ENSMUST00000215522 229 ntBASIC8.33□□□□□ -1.08
Sox1P53783 AC122360.1-201ENSMUST00000217737 624 ntBASIC8.33□□□□□ -1.08
Sox1P53783 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC8.33□□□□□ -1.08
Sox1P53783 Gm19233-201ENSMUST00000219772 936 ntBASIC8.33□□□□□ -1.08
Sox1P53783 CT009518.1-201ENSMUST00000224886 1571 ntBASIC8.33□□□□□ -1.08
Sox1P53783 AC133958.1-201ENSMUST00000227085 961 ntBASIC8.33□□□□□ -1.08
Sox1P53783 Cldn1-201ENSMUST00000023154 3247 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sox1P53783 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Sox1P53783 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sox1P53783 Ndufa7-201ENSMUST00000048249 508 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sox1P53783 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
Sox1P53783 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
Sox1P53783 Casr-201ENSMUST00000063597 4534 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sox1P53783 Dgcr2-202ENSMUST00000066127 3790 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Sox1P53783 Olfr70-201ENSMUST00000055545 2568 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
Sox1P53783 Il1bos-202ENSMUST00000156601 2425 ntTSL 2 BASIC8.33□□□□□ -1.08
Sox1P53783 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Sox1P53783 1110002E22Rik-201ENSMUST00000163080 9741 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
Sox1P53783 Tbc1d24-207ENSMUST00000171189 4592 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Sox1P53783 Gm42601-201ENSMUST00000197025 1541 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Sox1P53783 Gm43178-201ENSMUST00000197257 1386 ntBASIC8.33□□□□□ -1.08
Sox1P53783 Unc13d-201ENSMUST00000075036 3967 ntAPPRIS P2 TSL 5 BASIC8.33□□□□□ -1.08
Sox1P53783 4732419C18Rik-201ENSMUST00000181805 3536 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
Sox1P53783 Ambra1-201ENSMUST00000045699 4690 ntTSL 5 BASIC8.33□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms