Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Actr10-201ENSMUST00000021479 4022 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col18a1P39061 Hal-202ENSMUST00000129421 5319 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col18a1P39061 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Col18a1P39061 Gm28311-201ENSMUST00000185236 1497 ntTSL 5 BASIC9.94□□□□□ -0.82
Col18a1P39061 Gm28549-202ENSMUST00000191354 1497 ntTSL 5 BASIC9.94□□□□□ -0.82
Col18a1P39061 AC122426.1-201ENSMUST00000214736 2235 ntBASIC9.94□□□□□ -0.82
Col18a1P39061 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC9.94□□□□□ -0.82
Col18a1P39061 Gm5124-202ENSMUST00000132683 2083 ntBASIC9.94□□□□□ -0.82
Col18a1P39061 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC9.94□□□□□ -0.82
Col18a1P39061 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
Col18a1P39061 Rnf19a-203ENSMUST00000228358 3452 ntBASIC9.94□□□□□ -0.82
Col18a1P39061 2310015D24Rik-202ENSMUST00000187920 2917 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Col18a1P39061 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC9.94□□□□□ -0.82
Col18a1P39061 A830010M20Rik-208ENSMUST00000211896 5256 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Col18a1P39061 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC9.94□□□□□ -0.82
Col18a1P39061 Gsdmc3-201ENSMUST00000089894 1443 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Col18a1P39061 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col18a1P39061 Masp2-201ENSMUST00000052060 3058 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col18a1P39061 Gm37314-201ENSMUST00000193545 2685 ntBASIC9.94□□□□□ -0.82
Col18a1P39061 Adgrg7-201ENSMUST00000023437 2698 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col18a1P39061 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Col18a1P39061 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Col18a1P39061 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Col18a1P39061 Gm11462-201ENSMUST00000117749 562 ntBASIC9.93□□□□□ -0.82
Col18a1P39061 Gm12152-201ENSMUST00000122465 684 ntBASIC9.93□□□□□ -0.82
Col18a1P39061 n-R5s209-201ENSMUST00000179494 119 ntBASIC9.93□□□□□ -0.82
Col18a1P39061 Mir7020-201ENSMUST00000183787 70 ntBASIC9.93□□□□□ -0.82
Col18a1P39061 1700011B04Rik-201ENSMUST00000189140 651 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Col18a1P39061 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC9.93□□□□□ -0.82
Col18a1P39061 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
Col18a1P39061 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC9.93□□□□□ -0.82
Col18a1P39061 1700011B04Rik-207ENSMUST00000221256 800 ntTSL 5 BASIC9.93□□□□□ -0.82
Col18a1P39061 1700011B04Rik-208ENSMUST00000221261 628 ntTSL 5 BASIC9.93□□□□□ -0.82
Col18a1P39061 Lrrc51-202ENSMUST00000098236 949 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Col18a1P39061 Tpk1-203ENSMUST00000114644 2148 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Col18a1P39061 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Col18a1P39061 Trim30c-201ENSMUST00000106828 1716 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Col18a1P39061 AC165260.6-202ENSMUST00000224959 1958 ntBASIC9.93□□□□□ -0.82
Col18a1P39061 Klf5-202ENSMUST00000226784 2852 ntBASIC9.93□□□□□ -0.82
Col18a1P39061 Rhof-204ENSMUST00000186469 4241 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col18a1P39061 Gm37520-201ENSMUST00000194883 2672 ntBASIC9.93□□□□□ -0.82
Col18a1P39061 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col18a1P39061 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
Col18a1P39061 Elmo1-201ENSMUST00000072519 5464 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col18a1P39061 Gm10286-201ENSMUST00000093603 5077 ntBASIC9.93□□□□□ -0.82
Col18a1P39061 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col18a1P39061 Zdhhc22-202ENSMUST00000222543 3462 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
Col18a1P39061 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Col18a1P39061 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col18a1P39061 Epn2-202ENSMUST00000108711 4287 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Col18a1P39061 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC9.93□□□□□ -0.82
Col18a1P39061 Hfe-202ENSMUST00000091706 3572 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col18a1P39061 Tbc1d14-203ENSMUST00000126077 4085 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
Col18a1P39061 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col18a1P39061 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC9.93□□□□□ -0.82
Col18a1P39061 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC9.93□□□□□ -0.82
Col18a1P39061 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col18a1P39061 Hnf4g-201ENSMUST00000108393 2224 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col18a1P39061 2210411M09Rik-201ENSMUST00000128545 643 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Col18a1P39061 Gm26665-201ENSMUST00000181378 839 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Col18a1P39061 Gm21524-201ENSMUST00000190499 696 ntBASIC9.93□□□□□ -0.82
Col18a1P39061 Gm21715-201ENSMUST00000191056 694 ntBASIC9.93□□□□□ -0.82
Col18a1P39061 Gm38122-201ENSMUST00000192679 885 ntBASIC9.93□□□□□ -0.82
Col18a1P39061 AC153557.1-201ENSMUST00000217697 403 ntBASIC9.93□□□□□ -0.82
Col18a1P39061 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC9.93□□□□□ -0.82
Col18a1P39061 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Col18a1P39061 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col18a1P39061 4933411G06Rik-201ENSMUST00000075909 1022 ntBASIC9.93□□□□□ -0.82
Col18a1P39061 Cdkal1-201ENSMUST00000006353 2629 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Col18a1P39061 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col18a1P39061 Gm38005-201ENSMUST00000194845 2745 ntBASIC9.92□□□□□ -0.82
Col18a1P39061 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col18a1P39061 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC9.92□□□□□ -0.82
Col18a1P39061 Grhl1-201ENSMUST00000020985 3070 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Col18a1P39061 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Col18a1P39061 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col18a1P39061 Ldlr-202ENSMUST00000213114 4318 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col18a1P39061 Cnot2-204ENSMUST00000164088 2618 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Col18a1P39061 Dctn4-204ENSMUST00000223984 2948 ntAPPRIS ALT1 BASIC9.92□□□□□ -0.82
Col18a1P39061 Runx1t1-202ENSMUST00000098256 3317 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col18a1P39061 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Col18a1P39061 Gm45407-201ENSMUST00000209499 3676 ntBASIC9.92□□□□□ -0.82
Col18a1P39061 Gng7-204ENSMUST00000118233 3433 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col18a1P39061 Gm24790-201ENSMUST00000104285 132 ntBASIC9.92□□□□□ -0.82
Col18a1P39061 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col18a1P39061 Gm12467-201ENSMUST00000117625 745 ntBASIC9.92□□□□□ -0.82
Col18a1P39061 Gm12540-201ENSMUST00000121938 319 ntBASIC9.92□□□□□ -0.82
Col18a1P39061 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Col18a1P39061 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Col18a1P39061 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC9.92□□□□□ -0.82
Col18a1P39061 Gm22923-201ENSMUST00000174952 110 ntBASIC9.92□□□□□ -0.82
Col18a1P39061 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Col18a1P39061 Gm8245-201ENSMUST00000182434 987 ntBASIC9.92□□□□□ -0.82
Col18a1P39061 Gm28527-201ENSMUST00000185210 297 ntBASIC9.92□□□□□ -0.82
Col18a1P39061 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC9.92□□□□□ -0.82
Col18a1P39061 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Col18a1P39061 9430069I07Rik-202ENSMUST00000227772 572 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Col18a1P39061 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Col18a1P39061 Gm6990-201ENSMUST00000086830 348 ntBASIC9.92□□□□□ -0.82
Col18a1P39061 Prkar1a-203ENSMUST00000106677 3513 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms