Protein–RNA interactions for Protein: P31041

Cd28, T-cell-specific surface glycoprotein CD28, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd28P31041 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC6.55□□□□□ -1.36
Cd28P31041 Il1f5-201ENSMUST00000028360 2842 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cd28P31041 Gm6350-201ENSMUST00000195099 1339 ntBASIC6.55□□□□□ -1.36
Cd28P31041 Gm37426-201ENSMUST00000195241 2470 ntBASIC6.55□□□□□ -1.36
Cd28P31041 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cd28P31041 Wdr7-201ENSMUST00000072726 7109 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cd28P31041 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Cd28P31041 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cd28P31041 n-R5s90-201ENSMUST00000103968 118 ntBASIC6.55□□□□□ -1.36
Cd28P31041 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cd28P31041 Cav2-203ENSMUST00000115462 694 ntTSL 5 BASIC6.55□□□□□ -1.36
Cd28P31041 Gm15000-201ENSMUST00000118275 1243 ntBASIC6.55□□□□□ -1.36
Cd28P31041 Gm12861-201ENSMUST00000145395 681 ntTSL 3 BASIC6.55□□□□□ -1.36
Cd28P31041 Gm11632-201ENSMUST00000145489 674 ntTSL 3 BASIC6.55□□□□□ -1.36
Cd28P31041 Gm12862-201ENSMUST00000150754 472 ntTSL 5 BASIC6.55□□□□□ -1.36
Cd28P31041 Gm22424-201ENSMUST00000158527 87 ntBASIC6.55□□□□□ -1.36
Cd28P31041 Olfr754-ps1-201ENSMUST00000173181 911 ntBASIC6.55□□□□□ -1.36
Cd28P31041 4921523L03Rik-201ENSMUST00000175729 1186 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cd28P31041 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
Cd28P31041 Tdgf1-ps1-201ENSMUST00000179882 516 ntBASIC6.55□□□□□ -1.36
Cd28P31041 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC6.55□□□□□ -1.36
Cd28P31041 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC6.55□□□□□ -1.36
Cd28P31041 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cd28P31041 Ndufa4-203ENSMUST00000204084 409 ntTSL 3 BASIC6.55□□□□□ -1.36
Cd28P31041 1700047O18Rik-201ENSMUST00000209738 743 ntBASIC6.55□□□□□ -1.36
Cd28P31041 AC166256.1-201ENSMUST00000219081 1271 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cd28P31041 AC163651.1-201ENSMUST00000222500 372 ntBASIC6.55□□□□□ -1.36
Cd28P31041 AC121357.1-201ENSMUST00000227365 608 ntBASIC6.55□□□□□ -1.36
Cd28P31041 CT009550.3-201ENSMUST00000228542 455 ntBASIC6.55□□□□□ -1.36
Cd28P31041 Mir486-201ENSMUST00000093576 128 ntBASIC6.55□□□□□ -1.36
Cd28P31041 Gm6819-201ENSMUST00000185325 1891 ntBASIC6.55□□□□□ -1.36
Cd28P31041 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cd28P31041 Utp20-201ENSMUST00000004470 8821 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Cd28P31041 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC6.55□□□□□ -1.36
Cd28P31041 Olfr846-202ENSMUST00000214810 4342 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Cd28P31041 Olfr727-202ENSMUST00000215317 2616 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Cd28P31041 Lgals9-202ENSMUST00000108268 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Cd28P31041 Chn1-202ENSMUST00000102677 3760 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Cd28P31041 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC6.54□□□□□ -1.36
Cd28P31041 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Cd28P31041 Myot-201ENSMUST00000025349 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Cd28P31041 Pnlip-201ENSMUST00000057270 1485 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Cd28P31041 Gm29364-201ENSMUST00000185289 2167 ntTSL 5 BASIC6.54□□□□□ -1.36
Cd28P31041 Gm29446-201ENSMUST00000190887 2166 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Cd28P31041 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Cd28P31041 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Cd28P31041 Gm24472-201ENSMUST00000104484 132 ntBASIC6.54□□□□□ -1.36
Cd28P31041 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC6.54□□□□□ -1.36
Cd28P31041 Gm13229-201ENSMUST00000118238 340 ntBASIC6.54□□□□□ -1.36
Cd28P31041 Gm11997-201ENSMUST00000118697 313 ntBASIC6.54□□□□□ -1.36
Cd28P31041 Gm12611-201ENSMUST00000119452 1037 ntBASIC6.54□□□□□ -1.36
Cd28P31041 Gm14202-201ENSMUST00000120121 311 ntBASIC6.54□□□□□ -1.36
Cd28P31041 Gm15989-201ENSMUST00000121895 498 ntBASIC6.54□□□□□ -1.36
Cd28P31041 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC6.54□□□□□ -1.36
Cd28P31041 Gm12930-201ENSMUST00000146679 676 ntTSL 3 BASIC6.54□□□□□ -1.36
Cd28P31041 H2afy3-201ENSMUST00000151919 1112 ntBASIC6.54□□□□□ -1.36
Cd28P31041 Gm15888-201ENSMUST00000154016 538 ntTSL 2 BASIC6.54□□□□□ -1.36
Cd28P31041 Gm22484-201ENSMUST00000157992 306 ntBASIC6.54□□□□□ -1.36
Cd28P31041 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC6.54□□□□□ -1.36
Cd28P31041 Gm26455-201ENSMUST00000175300 92 ntBASIC6.54□□□□□ -1.36
Cd28P31041 Mir6403-201ENSMUST00000185007 129 ntBASIC6.54□□□□□ -1.36
Cd28P31041 Mir8097-201ENSMUST00000185150 119 ntBASIC6.54□□□□□ -1.36
Cd28P31041 Gm29243-201ENSMUST00000188318 418 ntTSL 5 BASIC6.54□□□□□ -1.36
Cd28P31041 Gm19412-202ENSMUST00000189156 569 ntTSL 3 BASIC6.54□□□□□ -1.36
Cd28P31041 Gm18699-201ENSMUST00000190713 243 ntBASIC6.54□□□□□ -1.36
Cd28P31041 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC6.54□□□□□ -1.36
Cd28P31041 Ndufc1-204ENSMUST00000193279 315 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
Cd28P31041 Gm37310-201ENSMUST00000195237 2968 ntBASIC6.54□□□□□ -1.36
Cd28P31041 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC6.54□□□□□ -1.36
Cd28P31041 4933417G07Rik-201ENSMUST00000199681 1137 ntBASIC6.54□□□□□ -1.36
Cd28P31041 Ceacam1-204ENSMUST00000205308 993 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Cd28P31041 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Cd28P31041 Mypopos-204ENSMUST00000206381 473 ntTSL 2 BASIC6.54□□□□□ -1.36
Cd28P31041 Gm5535-206ENSMUST00000210067 679 ntTSL 5 BASIC6.54□□□□□ -1.36
Cd28P31041 Gm45432-201ENSMUST00000210391 416 ntBASIC6.54□□□□□ -1.36
Cd28P31041 AC163041.2-201ENSMUST00000223082 573 ntBASIC6.54□□□□□ -1.36
Cd28P31041 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Cd28P31041 Olfr1418-201ENSMUST00000079875 1072 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Cd28P31041 Olfr1283-201ENSMUST00000090328 1026 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Cd28P31041 Olfr23-201ENSMUST00000092917 978 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Cd28P31041 Folr2-201ENSMUST00000094141 1067 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Cd28P31041 Olfr1320-201ENSMUST00000096449 960 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Cd28P31041 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Cd28P31041 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Cd28P31041 AC138284.1-201ENSMUST00000214258 3236 ntBASIC6.54□□□□□ -1.36
Cd28P31041 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Cd28P31041 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Cd28P31041 Gm44550-201ENSMUST00000207311 2058 ntBASIC6.54□□□□□ -1.36
Cd28P31041 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
Cd28P31041 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Cd28P31041 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
Cd28P31041 Olfr212-203ENSMUST00000220134 2349 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Cd28P31041 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Cd28P31041 Gm38120-201ENSMUST00000195506 4642 ntBASIC6.54□□□□□ -1.36
Cd28P31041 Slc51a-201ENSMUST00000042042 1600 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Cd28P31041 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Cd28P31041 Gm3883-201ENSMUST00000098119 3229 ntBASIC6.54□□□□□ -1.36
Cd28P31041 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Cd28P31041 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Cd28P31041 Tpte-201ENSMUST00000077194 2549 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms