Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Sdc1P18828 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC6.1□□□□□ -1.43
Sdc1P18828 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
Sdc1P18828 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC6.1□□□□□ -1.43
Sdc1P18828 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
Sdc1P18828 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Sdc1P18828 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.1□□□□□ -1.43
Sdc1P18828 CT025675.1-201ENSMUST00000228171 1567 ntBASIC6.1□□□□□ -1.43
Sdc1P18828 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC6.09□□□□□ -1.43
Sdc1P18828 Gm37216-201ENSMUST00000193817 3478 ntBASIC6.09□□□□□ -1.43
Sdc1P18828 Gm4858-203ENSMUST00000195847 1451 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Sdc1P18828 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sdc1P18828 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sdc1P18828 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sdc1P18828 St18-204ENSMUST00000131494 5720 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sdc1P18828 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sdc1P18828 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sdc1P18828 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Sdc1P18828 Gm8914-201ENSMUST00000101396 1035 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Sdc1P18828 Rps27a-201ENSMUST00000102844 637 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sdc1P18828 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC6.09□□□□□ -1.43
Sdc1P18828 Gm5071-201ENSMUST00000104922 1035 ntBASIC6.09□□□□□ -1.43
Sdc1P18828 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sdc1P18828 Pcna-ps1-201ENSMUST00000118453 738 ntBASIC6.09□□□□□ -1.43
Sdc1P18828 Romo1-204ENSMUST00000119950 379 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
Sdc1P18828 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC6.09□□□□□ -1.43
Sdc1P18828 Ndufb5-203ENSMUST00000122290 625 ntTSL 2 BASIC6.09□□□□□ -1.43
Sdc1P18828 n-R5s43-201ENSMUST00000122739 110 ntBASIC6.09□□□□□ -1.43
Sdc1P18828 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sdc1P18828 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sdc1P18828 Gm8464-202ENSMUST00000146697 1142 ntBASIC6.09□□□□□ -1.43
Sdc1P18828 Gm14573-201ENSMUST00000150544 451 ntTSL 2 BASIC6.09□□□□□ -1.43
Sdc1P18828 Gm4750-201ENSMUST00000151942 1142 ntBASIC6.09□□□□□ -1.43
Sdc1P18828 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sdc1P18828 Gm17139-201ENSMUST00000163802 571 ntTSL 5 BASIC6.09□□□□□ -1.43
Sdc1P18828 Vmn1r169-201ENSMUST00000170290 915 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Sdc1P18828 Mir199b-201ENSMUST00000175066 110 ntBASIC6.09□□□□□ -1.43
Sdc1P18828 Gm25694-201ENSMUST00000175448 282 ntBASIC6.09□□□□□ -1.43
Sdc1P18828 Mir6403-201ENSMUST00000185007 129 ntBASIC6.09□□□□□ -1.43
Sdc1P18828 Gm9553-201ENSMUST00000185703 996 ntBASIC6.09□□□□□ -1.43
Sdc1P18828 Gm38145-201ENSMUST00000192319 693 ntBASIC6.09□□□□□ -1.43
Sdc1P18828 Gm37349-201ENSMUST00000194205 624 ntBASIC6.09□□□□□ -1.43
Sdc1P18828 Gm38233-201ENSMUST00000194259 807 ntBASIC6.09□□□□□ -1.43
Sdc1P18828 Gm17806-201ENSMUST00000195844 383 ntBASIC6.09□□□□□ -1.43
Sdc1P18828 Gm43461-201ENSMUST00000202351 996 ntBASIC6.09□□□□□ -1.43
Sdc1P18828 Rassf6-205ENSMUST00000202704 1178 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.43
Sdc1P18828 Gm34358-201ENSMUST00000204585 665 ntTSL 3 BASIC6.09□□□□□ -1.43
Sdc1P18828 Gm38941-201ENSMUST00000208606 529 ntBASIC6.09□□□□□ -1.43
Sdc1P18828 Gm44982-201ENSMUST00000208795 471 ntBASIC6.09□□□□□ -1.43
Sdc1P18828 Olfr1445-201ENSMUST00000049624 1001 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Sdc1P18828 Gm5072-201ENSMUST00000063726 1035 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Sdc1P18828 Fabp3-ps1-201ENSMUST00000070435 402 ntBASIC6.09□□□□□ -1.43
Sdc1P18828 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sdc1P18828 Snora61-201ENSMUST00000083015 130 ntBASIC6.09□□□□□ -1.43
Sdc1P18828 Xlr5c-202ENSMUST00000114503 1656 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sdc1P18828 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Sdc1P18828 Cphx1-204ENSMUST00000184016 1649 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sdc1P18828 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
Sdc1P18828 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sdc1P18828 Homer1-201ENSMUST00000060490 2765 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Sdc1P18828 Calr4-203ENSMUST00000106629 1583 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Sdc1P18828 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC6.09□□□□□ -1.43
Sdc1P18828 Lgals9-202ENSMUST00000108268 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
Sdc1P18828 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Sdc1P18828 Gm19801-201ENSMUST00000218231 1882 ntBASIC6.09□□□□□ -1.44
Sdc1P18828 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
Sdc1P18828 Cntrl-204ENSMUST00000113033 1817 ntTSL 5 BASIC6.09□□□□□ -1.44
Sdc1P18828 Gm44093-201ENSMUST00000204381 1802 ntBASIC6.09□□□□□ -1.44
Sdc1P18828 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Sdc1P18828 Gm16506-201ENSMUST00000165553 1405 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Sdc1P18828 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Sdc1P18828 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC6.08□□□□□ -1.44
Sdc1P18828 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Sdc1P18828 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Sdc1P18828 AC154642.2-201ENSMUST00000223657 2485 ntBASIC6.08□□□□□ -1.44
Sdc1P18828 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sdc1P18828 D3Ertd751e-208ENSMUST00000192193 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sdc1P18828 Gm38276-201ENSMUST00000192446 1343 ntBASIC6.08□□□□□ -1.44
Sdc1P18828 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Sdc1P18828 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC6.08□□□□□ -1.44
Sdc1P18828 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
Sdc1P18828 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Sdc1P18828 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Sdc1P18828 Gm14276-201ENSMUST00000117941 720 ntBASIC6.08□□□□□ -1.44
Sdc1P18828 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Sdc1P18828 Mup-ps24-201ENSMUST00000119939 286 ntBASIC6.08□□□□□ -1.44
Sdc1P18828 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC6.08□□□□□ -1.44
Sdc1P18828 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC6.08□□□□□ -1.44
Sdc1P18828 Gm5698-201ENSMUST00000178317 724 ntBASIC6.08□□□□□ -1.44
Sdc1P18828 Trav5d-4-201ENSMUST00000179701 343 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Sdc1P18828 Trav5n-4-201ENSMUST00000179997 343 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Sdc1P18828 Smarce1-ps1-201ENSMUST00000180067 1077 ntBASIC6.08□□□□□ -1.44
Sdc1P18828 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sdc1P18828 Gm26974-202ENSMUST00000183263 930 ntTSL 2 BASIC6.08□□□□□ -1.44
Sdc1P18828 Gm28723-201ENSMUST00000188640 1001 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Sdc1P18828 1700063D05Rik-203ENSMUST00000191461 666 ntTSL 2 BASIC6.08□□□□□ -1.44
Sdc1P18828 Gm38358-201ENSMUST00000195144 428 ntBASIC6.08□□□□□ -1.44
Sdc1P18828 1700081B01Rik-202ENSMUST00000197543 648 ntTSL 3 BASIC6.08□□□□□ -1.44
Sdc1P18828 Gm40332-201ENSMUST00000199847 938 ntBASIC6.08□□□□□ -1.44
Sdc1P18828 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC6.08□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 126.9 ms