Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm25515-201ENSMUST00000083858 157 ntBASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Adhfe1-203ENSMUST00000144177 3239 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Grik1-202ENSMUST00000072256 3655 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 AC118222.1-201ENSMUST00000222184 2973 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Gm9923-201ENSMUST00000217785 1836 ntBASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Gm26614-201ENSMUST00000180386 3909 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Gm10556-201ENSMUST00000180904 3906 ntTSL 2 BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Angpt2-201ENSMUST00000033846 3560 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Gigyf2-217ENSMUST00000174501 3876 ntAPPRIS P3 TSL 5 BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Pgbd1-205ENSMUST00000151743 2642 ntAPPRIS P4 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Erp44-201ENSMUST00000030028 2624 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Disp1-202ENSMUST00000171366 4687 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Gm42692-201ENSMUST00000199482 2833 ntBASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Gm37065-203ENSMUST00000192498 1622 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Timeless-205ENSMUST00000105244 4341 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Hyou1-206ENSMUST00000161318 4489 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Gm16060-201ENSMUST00000153140 478 ntBASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Gm36965-201ENSMUST00000193797 394 ntBASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Robo4-202ENSMUST00000115046 3878 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Atg7-202ENSMUST00000169310 3895 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Stam-201ENSMUST00000028050 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Tars2-203ENSMUST00000098857 3228 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Gm5113-201ENSMUST00000085668 2955 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Serpina1a-201ENSMUST00000072876 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Gm8281-201ENSMUST00000100893 612 ntTSL 5 BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Trbv23-201ENSMUST00000103279 344 ntAPPRIS ALT2 BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Igkv4-78-201ENSMUST00000103343 358 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Gm11257-201ENSMUST00000121313 315 ntBASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Gm17059-201ENSMUST00000168284 519 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Olfr270-202ENSMUST00000172257 939 ntAPPRIS P2 BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Gm2539-203ENSMUST00000181352 746 ntBASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Gm38133-201ENSMUST00000195109 815 ntTSL 5 BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Gm38384-201ENSMUST00000195413 1122 ntBASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Gm8512-201ENSMUST00000215367 471 ntBASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Gm36501-201ENSMUST00000221857 745 ntBASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Slc2a9-203ENSMUST00000067886 3602 ntAPPRIS P4 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Birc5-202ENSMUST00000093906 3334 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Gm18409-201ENSMUST00000218988 2506 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col6a3E9PWQ3 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 0610030E20Rik-201ENSMUST00000077783 4605 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Olfr1121-202ENSMUST00000213792 1996 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Slc6a3-201ENSMUST00000022100 3456 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Gm8314-201ENSMUST00000208964 1858 ntBASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Igkv6-15-201ENSMUST00000103393 347 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Gm22714-201ENSMUST00000116894 78 ntBASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Gm14865-201ENSMUST00000117523 494 ntBASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Gm3351-201ENSMUST00000193454 505 ntBASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Gm18850-201ENSMUST00000211578 388 ntBASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Ccr1l1-201ENSMUST00000071404 1166 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 AL645745.1-201ENSMUST00000222202 5348 ntTSL 2 BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Tcf4-206ENSMUST00000114982 3694 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Pdilt-201ENSMUST00000033267 2146 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Pla2g2c-202ENSMUST00000105808 3448 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Olfr1113-202ENSMUST00000215611 1949 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Synrg-202ENSMUST00000092834 7115 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Gm45790-201ENSMUST00000211986 1629 ntTSL 5 BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Gm25346-201ENSMUST00000104509 128 ntBASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Ston1-207ENSMUST00000163588 2983 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Gm8321-201ENSMUST00000181691 980 ntBASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Gm43576-201ENSMUST00000197937 871 ntBASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Gm2221-201ENSMUST00000209342 418 ntBASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 CT485607.3-201ENSMUST00000213361 672 ntBASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 AC154382.1-201ENSMUST00000220958 1282 ntBASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Tceal8-201ENSMUST00000060101 1250 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Esrrb-204ENSMUST00000116402 4300 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Col6a3E9PWQ3 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms