Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Col4a6B1AVK5 Acly-207ENSMUST00000165111 4162 ntAPPRIS P3 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col4a6B1AVK5 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Col4a6B1AVK5 Asb14-201ENSMUST00000090337 2062 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Col4a6B1AVK5 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Col4a6B1AVK5 Phxr4-202ENSMUST00000216590 1391 ntBASIC7.75□□□□□ -1.17
Col4a6B1AVK5 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC7.75□□□□□ -1.17
Col4a6B1AVK5 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC7.75□□□□□ -1.17
Col4a6B1AVK5 Gm28651-202ENSMUST00000227968 2693 ntBASIC7.75□□□□□ -1.17
Col4a6B1AVK5 Dclk1-212ENSMUST00000199585 5196 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Col4a6B1AVK5 Gm5752-201ENSMUST00000117771 594 ntBASIC7.75□□□□□ -1.17
Col4a6B1AVK5 Gm12175-201ENSMUST00000122081 345 ntBASIC7.75□□□□□ -1.17
Col4a6B1AVK5 Gm12504-202ENSMUST00000148026 306 ntBASIC7.75□□□□□ -1.17
Col4a6B1AVK5 Gm24812-201ENSMUST00000175315 284 ntBASIC7.75□□□□□ -1.17
Col4a6B1AVK5 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col4a6B1AVK5 Mir7033-201ENSMUST00000184259 81 ntBASIC7.75□□□□□ -1.17
Col4a6B1AVK5 Gm24826-202ENSMUST00000197298 216 ntBASIC7.75□□□□□ -1.17
Col4a6B1AVK5 Gm43063-201ENSMUST00000198198 1081 ntBASIC7.75□□□□□ -1.17
Col4a6B1AVK5 AC099934.1-201ENSMUST00000200493 79 ntBASIC7.75□□□□□ -1.17
Col4a6B1AVK5 Gm43553-201ENSMUST00000200900 685 ntBASIC7.75□□□□□ -1.17
Col4a6B1AVK5 Gm30498-201ENSMUST00000204033 615 ntTSL 5 BASIC7.75□□□□□ -1.17
Col4a6B1AVK5 E230029C05Rik-204ENSMUST00000208266 875 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Col4a6B1AVK5 4930455C13Rik-201ENSMUST00000218108 1018 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Col4a6B1AVK5 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Col4a6B1AVK5 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC7.75□□□□□ -1.17
Col4a6B1AVK5 AC124489.3-201ENSMUST00000224037 278 ntBASIC7.75□□□□□ -1.17
Col4a6B1AVK5 AC114008.1-201ENSMUST00000226193 937 ntBASIC7.75□□□□□ -1.17
Col4a6B1AVK5 AC123665.3-201ENSMUST00000228735 1216 ntBASIC7.75□□□□□ -1.17
Col4a6B1AVK5 AC165155.1-201ENSMUST00000228932 445 ntBASIC7.75□□□□□ -1.17
Col4a6B1AVK5 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC7.75□□□□□ -1.17
Col4a6B1AVK5 Itgam-205ENSMUST00000120355 3701 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Col4a6B1AVK5 Gm14244-201ENSMUST00000155688 2410 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
Col4a6B1AVK5 Olfr1241-203ENSMUST00000215055 2441 ntAPPRIS P1 TSL 5 BASIC7.75□□□□□ -1.17
Col4a6B1AVK5 Gm36120-201ENSMUST00000214393 1734 ntTSL 5 BASIC7.75□□□□□ -1.17
Col4a6B1AVK5 Eps15-204ENSMUST00000132165 2295 ntAPPRIS ALT2 TSL 5 BASIC7.75□□□□□ -1.17
Col4a6B1AVK5 AC161247.1-201ENSMUST00000217744 2295 ntBASIC7.75□□□□□ -1.17
Col4a6B1AVK5 Nbr1-207ENSMUST00000107218 3353 ntAPPRIS P3 TSL 5 BASIC7.75□□□□□ -1.17
Col4a6B1AVK5 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC7.75□□□□□ -1.17
Col4a6B1AVK5 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC7.75□□□□□ -1.17
Col4a6B1AVK5 Myo1f-201ENSMUST00000087605 3819 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Col4a6B1AVK5 Tcf7l2-211ENSMUST00000111658 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Nudt7-202ENSMUST00000073521 3543 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Xpnpep2-201ENSMUST00000077775 3498 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Apobec3-204ENSMUST00000175714 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Gm45746-201ENSMUST00000212623 2447 ntBASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Psmf1-201ENSMUST00000042452 3809 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Gm14252-201ENSMUST00000131801 3215 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Gm7690-201ENSMUST00000190885 1399 ntBASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Uhrf1-201ENSMUST00000001258 3586 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Mbtps1-202ENSMUST00000098362 4336 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Gm26416-201ENSMUST00000104280 134 ntBASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Gm24519-201ENSMUST00000104507 132 ntBASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Gm15188-201ENSMUST00000121264 704 ntBASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Gm8722-201ENSMUST00000121466 769 ntBASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Gm11609-201ENSMUST00000121926 793 ntBASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Gm14847-201ENSMUST00000121978 519 ntBASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Gm20702-201ENSMUST00000176181 460 ntBASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Gm29156-201ENSMUST00000187764 499 ntBASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Gm44971-201ENSMUST00000206192 337 ntBASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Gm18562-201ENSMUST00000209949 915 ntBASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Gm4972-201ENSMUST00000211108 1254 ntBASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 CT025685.1-201ENSMUST00000213716 150 ntBASIC7.74□□□□□ -1.17
Col4a6B1AVK5 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 AC153847.1-201ENSMUST00000214524 353 ntBASIC7.74□□□□□ -1.17
Col4a6B1AVK5 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC7.74□□□□□ -1.17
Col4a6B1AVK5 CT009550.2-201ENSMUST00000228851 399 ntBASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Gm6436-201ENSMUST00000077163 451 ntBASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Olfr644-201ENSMUST00000077417 1071 ntAPPRIS P1 BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Ucp2-202ENSMUST00000126534 3988 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Ces1g-201ENSMUST00000044602 2388 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 AC154522.1-201ENSMUST00000224647 1903 ntBASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Gm37121-201ENSMUST00000192219 2556 ntBASIC7.74□□□□□ -1.17
Col4a6B1AVK5 AC158622.2-201ENSMUST00000217363 2552 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Sidt1-204ENSMUST00000127567 2901 ntTSL 1 (best) BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Washc2-201ENSMUST00000036759 4307 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Tmc2-201ENSMUST00000077988 3216 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Fto-201ENSMUST00000069718 3564 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Pik3r4-210ENSMUST00000191268 4756 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Flii-201ENSMUST00000002889 4060 ntAPPRIS P1 TSL 1 (best) BASIC7.74□□□□□ -1.17
Col4a6B1AVK5 Gm16427-203ENSMUST00000201432 2042 ntAPPRIS P5 TSL 1 (best) BASIC7.74□□□□□ -1.17
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms