Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm27506-201ENSMUST00000184558 80 ntBASIC7.11□□□□□ -1.27
Sec61a2Q9JLR1 Gm27529-201ENSMUST00000184975 80 ntBASIC7.11□□□□□ -1.27
Sec61a2Q9JLR1 Gm27907-201ENSMUST00000185101 80 ntBASIC7.11□□□□□ -1.27
Sec61a2Q9JLR1 Gm8870-201ENSMUST00000188170 775 ntBASIC7.11□□□□□ -1.27
Sec61a2Q9JLR1 Tdpoz2-201ENSMUST00000191960 1145 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Sec61a2Q9JLR1 Gm18547-201ENSMUST00000192439 811 ntBASIC7.11□□□□□ -1.27
Sec61a2Q9JLR1 Gm38283-201ENSMUST00000193041 695 ntBASIC7.11□□□□□ -1.27
Sec61a2Q9JLR1 Gm7631-201ENSMUST00000196935 1100 ntBASIC7.11□□□□□ -1.27
Sec61a2Q9JLR1 Gm42723-202ENSMUST00000200561 1254 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Sec61a2Q9JLR1 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC7.11□□□□□ -1.27
Sec61a2Q9JLR1 2510016D11Rik-201ENSMUST00000201971 985 ntBASIC7.11□□□□□ -1.27
Sec61a2Q9JLR1 Gm44213-201ENSMUST00000204977 703 ntBASIC7.11□□□□□ -1.27
Sec61a2Q9JLR1 Gm6290-201ENSMUST00000207666 1158 ntBASIC7.11□□□□□ -1.27
Sec61a2Q9JLR1 Gm45889-201ENSMUST00000209535 1057 ntBASIC7.11□□□□□ -1.27
Sec61a2Q9JLR1 Gm3774-201ENSMUST00000209773 435 ntBASIC7.11□□□□□ -1.27
Sec61a2Q9JLR1 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Sec61a2Q9JLR1 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sec61a2Q9JLR1 BC042761-201ENSMUST00000218344 938 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
Sec61a2Q9JLR1 Gm18242-201ENSMUST00000218455 542 ntBASIC7.11□□□□□ -1.27
Sec61a2Q9JLR1 AC134462.1-201ENSMUST00000223047 552 ntTSL 2 BASIC7.11□□□□□ -1.27
Sec61a2Q9JLR1 AC207128.2-202ENSMUST00000224010 808 ntBASIC7.11□□□□□ -1.27
Sec61a2Q9JLR1 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sec61a2Q9JLR1 AC116724.1-201ENSMUST00000227900 972 ntBASIC7.11□□□□□ -1.27
Sec61a2Q9JLR1 Gkn2-201ENSMUST00000032128 788 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sec61a2Q9JLR1 Gm5619-201ENSMUST00000071172 760 ntBASIC7.11□□□□□ -1.27
Sec61a2Q9JLR1 Rpl27-ps3-201ENSMUST00000097682 475 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Sec61a2Q9JLR1 Olfr1303-201ENSMUST00000099609 939 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
Sec61a2Q9JLR1 Rbx1-201ENSMUST00000023036 1655 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sec61a2Q9JLR1 Hnmt-203ENSMUST00000114498 1632 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sec61a2Q9JLR1 Gm37675-201ENSMUST00000192303 2847 ntBASIC7.11□□□□□ -1.27
Sec61a2Q9JLR1 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC7.11□□□□□ -1.27
Sec61a2Q9JLR1 Gcnt2-201ENSMUST00000067778 4038 ntAPPRIS P5 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sec61a2Q9JLR1 Xpnpep2-201ENSMUST00000077775 3498 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sec61a2Q9JLR1 Gm37109-201ENSMUST00000195475 2254 ntBASIC7.11□□□□□ -1.27
Sec61a2Q9JLR1 Tgfb3-201ENSMUST00000003687 3383 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Sec61a2Q9JLR1 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Pinc-201ENSMUST00000190229 2170 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 A430110L20Rik-202ENSMUST00000181680 2513 ntBASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Slc16a4-202ENSMUST00000106723 1781 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Gm28906-201ENSMUST00000191371 1779 ntBASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 3830406C13Rik-201ENSMUST00000112669 2477 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Zfp37-201ENSMUST00000068822 3494 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 BC049715-203ENSMUST00000203499 2057 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Gm38386-201ENSMUST00000194293 3421 ntBASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Trpv1-202ENSMUST00000102526 3361 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Bbs12-202ENSMUST00000108121 2348 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Gm44746-201ENSMUST00000205565 1349 ntBASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Ipcef1-201ENSMUST00000078070 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Huwe1-201ENSMUST00000026292 14579 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Gm43430-201ENSMUST00000196513 3897 ntBASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Gngt2-202ENSMUST00000100532 573 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Gm11348-201ENSMUST00000118813 318 ntBASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Gm13683-201ENSMUST00000119497 1076 ntBASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Gm15574-201ENSMUST00000119937 405 ntBASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Gm13269-201ENSMUST00000143458 655 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Trim30e-ps1-202ENSMUST00000151294 731 ntBASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Gm16571-201ENSMUST00000159112 291 ntBASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Bud31-207ENSMUST00000162594 867 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Gm17188-202ENSMUST00000165178 680 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Gm3002-202ENSMUST00000178256 444 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Gm2974-202ENSMUST00000180184 447 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Gm26436-201ENSMUST00000180325 132 ntBASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 4933406F09Rik-202ENSMUST00000180508 680 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Tmem147os-201ENSMUST00000180820 1276 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Gm27010-201ENSMUST00000182727 863 ntTSL 3 BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Mlip-212ENSMUST00000184848 1019 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Mir6922-201ENSMUST00000185099 66 ntBASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Gm43507-201ENSMUST00000196411 675 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Kcne3-207ENSMUST00000208260 929 ntAPPRIS P1 TSL 3 BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Gm16475-202ENSMUST00000209033 528 ntBASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 AC069561.1-201ENSMUST00000213750 424 ntBASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Cryab-203ENSMUST00000214962 846 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 AC102352.1-201ENSMUST00000224187 582 ntBASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 AC207128.1-201ENSMUST00000225928 799 ntBASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 AC154249.1-201ENSMUST00000226296 320 ntBASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Timm8b-201ENSMUST00000044051 518 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Olfr1153-201ENSMUST00000052300 957 ntBASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Olfr419-201ENSMUST00000061990 1088 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Gm6083-201ENSMUST00000075518 357 ntBASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Prkaa1-202ENSMUST00000228218 4618 ntBASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Pcyt1b-202ENSMUST00000113933 4867 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Scfd1-205ENSMUST00000219434 2749 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 AC131068.3-201ENSMUST00000228438 1456 ntBASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Ifit3b-201ENSMUST00000076249 2000 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Gm5431-201ENSMUST00000109209 1701 ntTSL 5 BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Olfr221-204ENSMUST00000216188 2871 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Chm-201ENSMUST00000026607 4868 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Sec61a2Q9JLR1 Gm26629-201ENSMUST00000180848 2276 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms