Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm25947-201ENSMUST00000180343 110 ntBASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 Gm4972-201ENSMUST00000211108 1254 ntBASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 AC166078.1-201ENSMUST00000217211 584 ntTSL 2 BASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 AC162183.1-201ENSMUST00000224843 472 ntBASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 Olfr1247-201ENSMUST00000099771 945 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 Tmem245-201ENSMUST00000068792 15981 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 Spp1-201ENSMUST00000031243 1410 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 Gm5903-201ENSMUST00000121836 2325 ntBASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 Gm14226-201ENSMUST00000130870 3243 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 Kansl1-203ENSMUST00000106971 5222 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 Gm6767-201ENSMUST00000118650 1381 ntBASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
Upk3aQ9JKX8 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Nek10-206ENSMUST00000224491 9567 ntAPPRIS P2 BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Gm5841-201ENSMUST00000195307 2177 ntBASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Gm18957-201ENSMUST00000197623 1813 ntBASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 4930512H18Rik-201ENSMUST00000133752 1493 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 4930447C04Rik-208ENSMUST00000136075 1970 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Svil-215ENSMUST00000210707 7633 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Zfp14-202ENSMUST00000207072 2835 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Ighv11-2-201ENSMUST00000103468 461 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Gm16056-201ENSMUST00000119293 135 ntBASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Gm10639-201ENSMUST00000119823 993 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Gm14746-201ENSMUST00000120309 741 ntBASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Gm13964-201ENSMUST00000133815 734 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Gm10086-201ENSMUST00000136334 354 ntBASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Gm24011-201ENSMUST00000157732 268 ntBASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Gm7393-201ENSMUST00000172650 739 ntBASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Gm37392-201ENSMUST00000192098 516 ntBASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Gm43590-201ENSMUST00000195987 387 ntBASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Gm18995-201ENSMUST00000202981 520 ntBASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 1700094M24Rik-201ENSMUST00000203771 665 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Gm39090-201ENSMUST00000205284 972 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Hba-x-201ENSMUST00000020531 801 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Kcne3-205ENSMUST00000207358 1154 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Gm8616-201ENSMUST00000222175 1037 ntBASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Olfr676-201ENSMUST00000098162 954 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Odf2-202ENSMUST00000046571 3959 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Cysltr2-201ENSMUST00000044664 1760 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Gm14280-201ENSMUST00000138080 1444 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Hsf2bp-201ENSMUST00000002145 2867 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Specc1-207ENSMUST00000201364 4955 ntAPPRIS P4 TSL 5 BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Gm2762-207ENSMUST00000202739 2665 ntBASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Mgat4a-205ENSMUST00000151952 7251 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Upk3aQ9JKX8 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Casp8-202ENSMUST00000165549 1917 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Mapk1ip1l-202ENSMUST00000166743 4542 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Nr3c1-202ENSMUST00000097592 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Strbp-202ENSMUST00000072186 3144 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Gm7982-201ENSMUST00000101011 1443 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Gm6351-201ENSMUST00000101021 1443 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Gm23323-201ENSMUST00000104471 133 ntBASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Pla2g2a-203ENSMUST00000135748 788 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 9430069I07Rik-201ENSMUST00000179647 336 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Panct2-201ENSMUST00000181489 3849 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Gm27458-201ENSMUST00000185108 121 ntBASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Gm28317-201ENSMUST00000187200 2166 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Usp40-204ENSMUST00000187758 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Gm28254-201ENSMUST00000189207 2166 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Gm29063-201ENSMUST00000190236 2166 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Gm29632-201ENSMUST00000190335 2166 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Gm28538-201ENSMUST00000190919 2166 ntTSL 5 BASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Gm37618-201ENSMUST00000192891 3075 ntBASIC7.31□□□□□ -1.24
Upk3aQ9JKX8 Gm38063-201ENSMUST00000193990 342 ntBASIC7.31□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 72.8 ms